RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	VCPKMT	Q9H867	229 aa		20.62	■□□□□ 0.89
MBD1-221	ENST00000589867	GABRQ	Q9UN88	632 aa		20.62	■□□□□ 0.89
MBD1-221	ENST00000589867	MYH4	Q9Y623	1939 aa		20.62	■□□□□ 0.89
MBD1-221	ENST00000589867	FMNL1	O95466	1100 aa	Predicted RBP	20.61	■□□□□ 0.89
MBD1-221	ENST00000589867	GNRH1	P01148	92 aa		20.61	■□□□□ 0.89
MBD1-221	ENST00000589867	FAM47A	Q5JRC9	791 aa		20.61	■□□□□ 0.89
MBD1-221	ENST00000589867	ARMC5	Q96C12	935 aa		20.61	■□□□□ 0.89
MBD1-221	ENST00000589867	ARHGEF10L	Q9HCE6	1279 aa		20.61	■□□□□ 0.89
MBD1-221	ENST00000589867	SPDYE16	A6NNV3	312 aa	Predicted RBP	20.6	■□□□□ 0.89
MBD1-221	ENST00000589867	FCGRT	P55899	365 aa		20.6	■□□□□ 0.89
MBD1-221	ENST00000589867	PRKCZ	Q05513	592 aa		20.6	■□□□□ 0.89
MBD1-221	ENST00000589867	LBX2	Q6XYB7	198 aa		20.6	■□□□□ 0.89
MBD1-221	ENST00000589867	CENPQ	Q7L2Z9	268 aa	Predicted RBP	20.6	■□□□□ 0.89
MBD1-221	ENST00000589867	SPICE1	Q8N0Z3	855 aa		20.6	■□□□□ 0.89
MBD1-221	ENST00000589867	NEDD1	Q8NHV4	660 aa		20.6	■□□□□ 0.89
MBD1-221	ENST00000589867	CEP95	Q96GE4	821 aa		20.6	■□□□□ 0.89
MBD1-221	ENST00000589867	DIAPH3	Q9NSV4	1193 aa		20.6	■□□□□ 0.89
MBD1-221	ENST00000589867	NYAP2	Q9P242	653 aa		20.6	■□□□□ 0.89
MBD1-221	ENST00000589867		A0A0G2JMZ2	1700 aa		20.6	■□□□□ 0.89
MBD1-221	ENST00000589867	ARHGEF6	Q15052	776 aa		20.59	■□□□□ 0.89
MBD1-221	ENST00000589867	ZNF444	Q8N0Y2	327 aa	Predicted RBP	20.59	■□□□□ 0.89
MBD1-221	ENST00000589867	MTMR4	Q9NYA4	1195 aa		20.59	■□□□□ 0.89
MBD1-221	ENST00000589867	BTBD7	Q9P203	1132 aa		20.59	■□□□□ 0.89
MBD1-221	ENST00000589867	LAMA4	Q16363	1823 aa		20.59	■□□□□ 0.89
MBD1-221	ENST00000589867	MYPN	Q86TC9	1320 aa		20.58	■□□□□ 0.89
MBD1-221	ENST00000589867	HIP1	O00291	1037 aa		20.58	■□□□□ 0.89
MBD1-221	ENST00000589867	ORC4	O43929	436 aa		20.58	■□□□□ 0.89
MBD1-221	ENST00000589867	CHML	P26374	656 aa		20.58	■□□□□ 0.89
MBD1-221	ENST00000589867	ERVK-9	P63128	1117 aa		20.58	■□□□□ 0.89
MBD1-221	ENST00000589867	ERVK-24	P63145	666 aa		20.58	■□□□□ 0.89
MBD1-221	ENST00000589867	TFAP4	Q01664	338 aa		20.58	■□□□□ 0.89
MBD1-221	ENST00000589867	ATP2B2	Q01814	1243 aa		20.58	■□□□□ 0.89
MBD1-221	ENST00000589867	PDE4B	Q07343	736 aa		20.58	■□□□□ 0.89
MBD1-221	ENST00000589867	TBC1D10C	Q8IV04	446 aa		20.58	■□□□□ 0.89
MBD1-221	ENST00000589867	LPAR1	Q92633	364 aa		20.58	■□□□□ 0.89
MBD1-221	ENST00000589867	MKL1	Q969V6	931 aa		20.58	■□□□□ 0.89
MBD1-221	ENST00000589867	PORCN	Q9H237	461 aa		20.58	■□□□□ 0.89
MBD1-221	ENST00000589867	IL17RB	Q9NRM6	502 aa		20.58	■□□□□ 0.89
MBD1-221	ENST00000589867	GJD2	Q9UKL4	321 aa		20.58	■□□□□ 0.89
MBD1-221	ENST00000589867	PRMT2	P55345	433 aa		20.57	■□□□□ 0.88
MBD1-221	ENST00000589867	SOX10	P56693	466 aa		20.57	■□□□□ 0.88
MBD1-221	ENST00000589867	HAND2	P61296	217 aa		20.57	■□□□□ 0.88
MBD1-221	ENST00000589867	GPRC5A	Q8NFJ5	357 aa		20.57	■□□□□ 0.88
MBD1-221	ENST00000589867	ZNF333	Q96JL9	665 aa		20.57	■□□□□ 0.88
MBD1-221	ENST00000589867	ZNF287	Q9HBT7	754 aa		20.57	■□□□□ 0.88
MBD1-221	ENST00000589867	NMT2	O60551	498 aa		20.56	■□□□□ 0.88
MBD1-221	ENST00000589867	SLC3A2	P08195	630 aa	Known RBP	20.56	■□□□□ 0.88
MBD1-221	ENST00000589867	NOV	P48745	357 aa		20.56	■□□□□ 0.88
MBD1-221	ENST00000589867	FLT3LG	P49771	235 aa		20.56	■□□□□ 0.88
MBD1-221	ENST00000589867	RGS19	P49795	217 aa		20.56	■□□□□ 0.88
MBD1-221	ENST00000589867	SH3TC2	Q8TF17	1288 aa		20.56	■□□□□ 0.88
MBD1-221	ENST00000589867	PAGR1	Q9BTK6	254 aa		20.56	■□□□□ 0.88
MBD1-221	ENST00000589867	DSCC1	Q9BVC3	393 aa		20.56	■□□□□ 0.88
MBD1-221	ENST00000589867	SH2D4A	Q9H788	454 aa		20.56	■□□□□ 0.88
MBD1-221	ENST00000589867	FBXO28	Q9NVF7	368 aa		20.56	■□□□□ 0.88
MBD1-221	ENST00000589867	CLIP2	Q9UDT6	1046 aa		20.56	■□□□□ 0.88
MBD1-221	ENST00000589867	RABGAP1	Q9Y3P9	1069 aa		20.56	■□□□□ 0.88
MBD1-221	ENST00000589867	TNPO2	O14787	897 aa	Known RBP	20.55	■□□□□ 0.88
MBD1-221	ENST00000589867	WDR46	O15213	610 aa	Known RBP	20.55	■□□□□ 0.88
MBD1-221	ENST00000589867	NDUFB10	O96000	172 aa		20.55	■□□□□ 0.88
MBD1-221	ENST00000589867	HOXD10	P28358	340 aa		20.55	■□□□□ 0.88
MBD1-221	ENST00000589867	DSG3	P32926	999 aa		20.55	■□□□□ 0.88
MBD1-221	ENST00000589867	COG2	Q14746	738 aa		20.55	■□□□□ 0.88
MBD1-221	ENST00000589867	GTF3C2	Q8WUA4	911 aa	Predicted RBP	20.55	■□□□□ 0.88
MBD1-221	ENST00000589867	NUP88	Q99567	741 aa	Predicted RBP	20.55	■□□□□ 0.88
MBD1-221	ENST00000589867	COL11A1	P12107	1806 aa	Predicted RBP	20.55	■□□□□ 0.88
MBD1-221	ENST00000589867	MKI67	P46013	3256 aa	Known RBP	20.54	■□□□□ 0.88
MBD1-221	ENST00000589867		F5H6K3	240 aa		20.54	■□□□□ 0.88
MBD1-221	ENST00000589867	TSPY3	P0CV98	308 aa		20.54	■□□□□ 0.88
MBD1-221	ENST00000589867	TSPY8	P0CW00	308 aa		20.54	■□□□□ 0.88
MBD1-221	ENST00000589867	MFAP1	P55081	439 aa	Known RBP	20.54	■□□□□ 0.88
MBD1-221	ENST00000589867	KLRC3	Q07444	240 aa		20.54	■□□□□ 0.88
MBD1-221	ENST00000589867	FAM83B	Q5T0W9	1011 aa		20.54	■□□□□ 0.88
MBD1-221	ENST00000589867	LRRC47	Q8N1G4	583 aa	Known RBP	20.54	■□□□□ 0.88
MBD1-221	ENST00000589867	ATG4C	Q96DT6	458 aa		20.54	■□□□□ 0.88
MBD1-221	ENST00000589867	TANGO6	Q9C0B7	1094 aa		20.54	■□□□□ 0.88
MBD1-221	ENST00000589867	ADAMTS5	Q9UNA0	930 aa		20.54	■□□□□ 0.88
MBD1-221	ENST00000589867	RBBP6	Q7Z6E9	1792 aa	Known RBP	20.54	■□□□□ 0.88
MBD1-221	ENST00000589867	TTLL1	O95922	423 aa		20.53	■□□□□ 0.88
MBD1-221	ENST00000589867	PTH1R	Q03431	593 aa		20.53	■□□□□ 0.88
MBD1-221	ENST00000589867	IRF5	Q13568	498 aa		20.53	■□□□□ 0.88
MBD1-221	ENST00000589867	STAG1	Q8WVM7	1258 aa		20.53	■□□□□ 0.88
MBD1-221	ENST00000589867	GOPC	Q9HD26	462 aa		20.53	■□□□□ 0.88
MBD1-221	ENST00000589867	TNRC18	O15417	2968 aa	Predicted RBP	20.53	■□□□□ 0.88
MBD1-221	ENST00000589867	NEDD4	P46934	1319 aa		20.53	■□□□□ 0.88
MBD1-221	ENST00000589867	POTEF	A5A3E0	1075 aa		20.52	■□□□□ 0.88
MBD1-221	ENST00000589867	FLOT1	O75955	427 aa		20.52	■□□□□ 0.88
MBD1-221	ENST00000589867	SLC9C1	Q4G0N8	1177 aa		20.52	■□□□□ 0.88
MBD1-221	ENST00000589867	AKNAD1	Q5T1N1	836 aa		20.52	■□□□□ 0.88
MBD1-221	ENST00000589867	REPS2	Q8NFH8	660 aa		20.52	■□□□□ 0.88
MBD1-221	ENST00000589867	USP6NL	Q92738	828 aa		20.52	■□□□□ 0.88
MBD1-221	ENST00000589867	HOXC10	Q9NYD6	342 aa		20.52	■□□□□ 0.88
MBD1-221	ENST00000589867	SYNPO2	Q9UMS6	1093 aa		20.52	■□□□□ 0.88
MBD1-221	ENST00000589867	RAD50	Q92878	1312 aa		20.52	■□□□□ 0.87
MBD1-221	ENST00000589867	TSPY2	A6NKD2	308 aa		20.51	■□□□□ 0.87
MBD1-221	ENST00000589867	SGSM2	O43147	1006 aa		20.51	■□□□□ 0.87
MBD1-221	ENST00000589867	RANBP6	O60518	1105 aa	Known RBP	20.51	■□□□□ 0.87
MBD1-221	ENST00000589867	GRK4	P32298	578 aa		20.51	■□□□□ 0.87
MBD1-221	ENST00000589867	MTFR1	Q15390	333 aa		20.51	■□□□□ 0.87
MBD1-221	ENST00000589867	MORN1	Q5T089	497 aa		20.51	■□□□□ 0.87

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