RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 ABCC12Q96J65 1359 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 TRAF5O00463 557 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 PAX4O43316 350 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 AOC2O75106 756 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 NOS3P29474 1203 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 RGS19P49795 217 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 MFAP1P55081 439 aaKnown RBP7.23□□□□□ -1.25
DNMT1-220ENST00000589351 KIAA2012Q0VF49 1180 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 EML3Q32P44 896 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 C2orf69Q8N8R5 385 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 DPF2Q92785 391 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 GLIS2Q9BZE0 524 aaPredicted RBP7.23□□□□□ -1.25
DNMT1-220ENST00000589351 ZNF408Q9H9D4 720 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 PCMTD2Q9NV79 361 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 ANKIB1Q9P2G1 1089 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 CNOT7Q9UIV1 285 aaKnown RBP7.23□□□□□ -1.25
DNMT1-220ENST00000589351 NAGPAQ9UK23 515 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 NOD1Q9Y239 953 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 HCN4Q9Y3Q4 1203 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 TRPM7Q96QT4 1865 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 LAMB4A4D0S4 1761 aa7.23□□□□□ -1.25
DNMT1-220ENST00000589351 SNED1Q8TER0 1413 aa7.22□□□□□ -1.25
DNMT1-220ENST00000589351 RAD17O75943 681 aa7.22□□□□□ -1.25
DNMT1-220ENST00000589351 TXKP42681 527 aa7.22□□□□□ -1.25
DNMT1-220ENST00000589351 HUNKP57058 714 aa7.22□□□□□ -1.25
DNMT1-220ENST00000589351 RIPK4P57078 832 aa7.22□□□□□ -1.25
DNMT1-220ENST00000589351 FMR1Q06787 632 aaKnown RBP eCLIP7.22□□□□□ -1.251e-8■■■□□ 14.9
DNMT1-220ENST00000589351 AIMP1Q12904 312 aaKnown RBP7.22□□□□□ -1.25
DNMT1-220ENST00000589351 TCIRG1Q13488 830 aa7.22□□□□□ -1.25
DNMT1-220ENST00000589351 DGKZQ13574 1117 aa7.22□□□□□ -1.25
DNMT1-220ENST00000589351 GRAPQ13588 217 aa7.22□□□□□ -1.25
DNMT1-220ENST00000589351 WASHC4Q2M389 1173 aa7.22□□□□□ -1.25
DNMT1-220ENST00000589351 C1orf53Q5VUE5 145 aa7.22□□□□□ -1.25
DNMT1-220ENST00000589351 COPS6Q7L5N1 327 aa7.22□□□□□ -1.25
DNMT1-220ENST00000589351 GRAPLQ8TC17 118 aaPredicted RBP7.22□□□□□ -1.25
DNMT1-220ENST00000589351 DCPSQ96C86 337 aaKnown RBP7.22□□□□□ -1.25
DNMT1-220ENST00000589351 EYA3Q99504 573 aa7.22□□□□□ -1.25
DNMT1-220ENST00000589351 THUMPD2Q9BTF0 503 aaKnown RBP7.22□□□□□ -1.25
DNMT1-220ENST00000589351 GDPD2Q9HCC8 539 aa7.22□□□□□ -1.25
DNMT1-220ENST00000589351 DNAJB12Q9NXW2 375 aaKnown RBP7.22□□□□□ -1.25
DNMT1-220ENST00000589351 ABCC4O15439 1325 aa7.22□□□□□ -1.25
DNMT1-220ENST00000589351 SH3TC1Q8TE82 1336 aa7.22□□□□□ -1.25
DNMT1-220ENST00000589351 COBLO75128 1261 aa7.21□□□□□ -1.26
DNMT1-220ENST00000589351 HCLS1P14317 486 aaPredicted RBP7.21□□□□□ -1.26
DNMT1-220ENST00000589351 RPS12P25398 132 aaKnown RBP7.21□□□□□ -1.26
DNMT1-220ENST00000589351 TMCO4Q5TGY1 634 aa7.21□□□□□ -1.26
DNMT1-220ENST00000589351 USP48Q86UV5 1035 aa7.21□□□□□ -1.26
DNMT1-220ENST00000589351 NLRP10Q86W26 655 aa7.21□□□□□ -1.26
DNMT1-220ENST00000589351 MEGF10Q96KG7 1140 aa7.21□□□□□ -1.26
DNMT1-220ENST00000589351 SUSD3Q96L08 255 aa7.21□□□□□ -1.26
DNMT1-220ENST00000589351 PLEKHF1Q96S99 279 aa7.21□□□□□ -1.26
DNMT1-220ENST00000589351 PHACTR1Q9C0D0 580 aa7.21□□□□□ -1.26
DNMT1-220ENST00000589351 MCOLN1Q9GZU1 580 aa7.21□□□□□ -1.26
DNMT1-220ENST00000589351 RGS9O75916 674 aaPredicted RBP7.2□□□□□ -1.26
DNMT1-220ENST00000589351 SSTR4P31391 388 aa7.2□□□□□ -1.26
DNMT1-220ENST00000589351 ABL2P42684 1182 aa7.2□□□□□ -1.26
DNMT1-220ENST00000589351 RGMBQ6NW40 437 aa7.2□□□□□ -1.26
DNMT1-220ENST00000589351 PRR23CQ6ZRP0 262 aa7.2□□□□□ -1.26
DNMT1-220ENST00000589351 KRT26Q7Z3Y9 468 aa7.2□□□□□ -1.26
DNMT1-220ENST00000589351 FBXO11Q86XK2 927 aa7.2□□□□□ -1.26
DNMT1-220ENST00000589351 XAGE3Q8WTP9 111 aa7.2□□□□□ -1.26
DNMT1-220ENST00000589351 ZC3H12CQ9C0D7 883 aaKnown RBP7.2□□□□□ -1.26
DNMT1-220ENST00000589351 GBA2Q9HCG7 927 aaPredicted RBP7.2□□□□□ -1.26
DNMT1-220ENST00000589351 KDM3BQ7LBC6 1761 aa7.2□□□□□ -1.26
DNMT1-220ENST00000589351 DLG5Q8TDM6 1919 aa7.19□□□□□ -1.26
DNMT1-220ENST00000589351 LTBP1Q14766 1721 aa7.19□□□□□ -1.26
DNMT1-220ENST00000589351 SKIP12755 728 aa7.19□□□□□ -1.26
DNMT1-220ENST00000589351 ZNF157P51786 506 aaPredicted RBP7.19□□□□□ -1.26
DNMT1-220ENST00000589351 HIRAP54198 1017 aaPredicted RBP7.19□□□□□ -1.26
DNMT1-220ENST00000589351 SF3B3Q15393 1217 aaKnown RBP7.19□□□□□ -1.26
DNMT1-220ENST00000589351 LCE1DQ5T752 114 aa7.19□□□□□ -1.26
DNMT1-220ENST00000589351 PLBD2Q8NHP8 589 aa7.19□□□□□ -1.26
DNMT1-220ENST00000589351 KRTAP4-7Q9BYR0 210 aa7.19□□□□□ -1.26
DNMT1-220ENST00000589351 GZF1Q9H116 711 aaPredicted RBP7.19□□□□□ -1.26
DNMT1-220ENST00000589351 SAGE1Q9NXZ1 904 aa7.19□□□□□ -1.26
DNMT1-220ENST00000589351 DBF4Q9UBU7 674 aaPredicted RBP7.19□□□□□ -1.26
DNMT1-220ENST00000589351 COL4A5P29400 1685 aa7.19□□□□□ -1.26
DNMT1-220ENST00000589351 A6NJR5 290 aa7.18□□□□□ -1.26
DNMT1-220ENST00000589351 PSMD14O00487 310 aa7.18□□□□□ -1.26
DNMT1-220ENST00000589351 ANXA1P04083 346 aa7.18□□□□□ -1.26
DNMT1-220ENST00000589351 HOXB7P09629 217 aa7.18□□□□□ -1.26
DNMT1-220ENST00000589351 SOX11P35716 441 aa7.18□□□□□ -1.26
DNMT1-220ENST00000589351 TMPOP42166 694 aaKnown RBP7.18□□□□□ -1.26
DNMT1-220ENST00000589351 PSMA6P60900 246 aaKnown RBP7.18□□□□□ -1.26
DNMT1-220ENST00000589351 RPS8P62241 208 aaKnown RBP7.18□□□□□ -1.26
DNMT1-220ENST00000589351 NCOA4Q13772 614 aa7.18□□□□□ -1.26
DNMT1-220ENST00000589351 RALBP1Q15311 655 aa7.18□□□□□ -1.26
DNMT1-220ENST00000589351 TBC1D10BQ4KMP7 808 aaPredicted RBP7.18□□□□□ -1.26
DNMT1-220ENST00000589351 HDGFL1Q5TGJ6 251 aa7.18□□□□□ -1.26
DNMT1-220ENST00000589351 LRP10Q7Z4F1 713 aa7.18□□□□□ -1.26
DNMT1-220ENST00000589351 TRPM4Q8TD43 1214 aa7.18□□□□□ -1.26
DNMT1-220ENST00000589351 TSPAN10Q9H1Z9 355 aaPredicted RBP7.18□□□□□ -1.26
DNMT1-220ENST00000589351 DBNDD1Q9H9R9 158 aa7.18□□□□□ -1.26
DNMT1-220ENST00000589351 HYPKQ9NX55 129 aa7.18□□□□□ -1.26
DNMT1-220ENST00000589351 LAS1LQ9Y4W2 734 aaKnown RBP7.18□□□□□ -1.26
DNMT1-220ENST00000589351 THSD7BQ9C0I4 1608 aa7.18□□□□□ -1.26
DNMT1-220ENST00000589351 ANKRD36CQ5JPF3 1778 aa7.18□□□□□ -1.26
DNMT1-220ENST00000589351 YDJCA8MPS7 323 aa7.17□□□□□ -1.26
DNMT1-220ENST00000589351 ECE2O60344 883 aa7.17□□□□□ -1.26
DNMT1-220ENST00000589351 KIF23Q02241 960 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms