RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 SND1Q7KZF4 910 aaKnown RBP eCLIP5.63□□□□□ -1.51
NF1-219ENST00000579081 RNF169Q8NCN4 708 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 GOLGA5Q8TBA6 731 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 TRIM31Q9BZY9 425 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 BHMT2Q9H2M3 363 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 SLC5A4Q9NY91 659 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 TRAPPC8Q9Y2L5 1435 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 ATXN8OSP0DMR3 200 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 PCSK2P16519 638 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 RARSP54136 660 aaKnown RBP5.63□□□□□ -1.51
NF1-219ENST00000579081 PHEXP78562 749 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 LMBR1LQ6UX01 489 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 PRR23CQ6ZRP0 262 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 TERB1Q8NA31 727 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 POMGNT1Q8WZA1 660 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 TMX3Q96JJ7 454 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 ACTR5Q9H9F9 607 aaPredicted RBP5.63□□□□□ -1.51
NF1-219ENST00000579081 RTEL1Q9NZ71 1219 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 PALM3A6NDB9 673 aaPredicted RBP5.63□□□□□ -1.51
NF1-219ENST00000579081 RNF113AO15541 343 aaKnown RBP5.63□□□□□ -1.51
NF1-219ENST00000579081 PIK3C2GO75747 1445 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 CLCN2P51788 898 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 YARSP54577 528 aaKnown RBP5.63□□□□□ -1.51
NF1-219ENST00000579081 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.63□□□□□ -1.51
NF1-219ENST00000579081 TTC22Q5TAA0 569 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 PHLDB3Q6NSJ2 640 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 CNNM4Q6P4Q7 775 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 DZIP3Q86Y13 1208 aaKnown RBP5.63□□□□□ -1.51
NF1-219ENST00000579081 CTAGE3PQ8IX95 158 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 PDZD8Q8NEN9 1154 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 SPDYE1Q8NFV5 336 aaPredicted RBP5.63□□□□□ -1.51
NF1-219ENST00000579081 SKA2Q8WVK7 121 aaPredicted RBP5.63□□□□□ -1.51
NF1-219ENST00000579081 GLT8D2Q9H1C3 349 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 SAP30BPQ9UHR5 308 aaKnown RBP5.63□□□□□ -1.51
NF1-219ENST00000579081 CTNND2Q9UQB3 1225 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 TRPC6Q9Y210 931 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 ABCC1P33527 1531 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 UBAP1LF5GYI3 381 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 DDX39AO00148 427 aaKnown RBP5.63□□□□□ -1.51
NF1-219ENST00000579081 ZNF174Q15697 407 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 CHRNA2Q15822 529 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 PDZD4Q76G19 769 aaPredicted RBP5.63□□□□□ -1.51
NF1-219ENST00000579081 MAEAQ7L5Y9 396 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 TRIM50Q86XT4 487 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 RNF10Q8N5U6 811 aaKnown RBP5.63□□□□□ -1.51
NF1-219ENST00000579081 TCEANC2Q96MN5 208 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 EMILIN1Q9Y6C2 1016 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 BLVRAP53004 296 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 RNASE9P60153 205 aaKnown RBP5.63□□□□□ -1.51
NF1-219ENST00000579081 SLC9C1Q4G0N8 1177 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 PPP4R4Q6NUP7 873 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 TBC1D9Q6ZT07 1266 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 PALM2Q8IXS6 379 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 MAGEB6Q8N7X4 407 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 CXorf38Q8TB03 319 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 XAGE3Q8WTP9 111 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 ZNF277Q9NRM2 450 aaPredicted RBP5.63□□□□□ -1.51
NF1-219ENST00000579081 AMOTL2Q9Y2J4 779 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 ANGPTL3Q9Y5C1 460 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 HNRNPCL2B2RXH8 293 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 NDUFAB1O14561 156 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 CHST3Q7LGC8 479 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 IFT20Q8IY31 132 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.63□□□□□ -1.51
NF1-219ENST00000579081 EXOC4Q96A65 974 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 HDAC11Q96DB2 347 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 TBC1D2Q9BYX2 928 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 IFNKQ9P0W0 207 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 ARHGAP42A6NI28 874 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 CAPN9O14815 690 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 PRKG1Q13976 671 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 ZYXQ15942 572 aaKnown RBP5.63□□□□□ -1.51
NF1-219ENST00000579081 XAB2Q9HCS7 855 aaKnown RBP5.63□□□□□ -1.51
NF1-219ENST00000579081 TMEM51Q9NW97 253 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 PRXQ9BXM0 1461 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 ZFYVE9O95405 1425 aa5.63□□□□□ -1.51
NF1-219ENST00000579081 LAMC1P11047 1609 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 ABLIM1O14639 778 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 KRT81Q14533 505 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 DDB1Q16531 1140 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 USP48Q86UV5 1035 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 NAPGQ99747 312 aaPredicted RBP5.62□□□□□ -1.51
NF1-219ENST00000579081 TEKT2Q9UIF3 430 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 TTC4O95801 387 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 PPP2R3AQ06190 1150 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 CCDC105Q8IYK2 499 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 PAG1Q9NWQ8 432 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 RNF40O75150 1001 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 F13A1P00488 732 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 NOP14P78316 857 aaKnown RBP5.62□□□□□ -1.51
NF1-219ENST00000579081 TSHZ3Q63HK5 1081 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 RSAD2Q8WXG1 361 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 CNOT10Q9H9A5 744 aaKnown RBP5.62□□□□□ -1.51
NF1-219ENST00000579081 MRPL40Q9NQ50 206 aaKnown RBP5.62□□□□□ -1.51
NF1-219ENST00000579081 PARP2Q9UGN5 583 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 TTC21BQ7Z4L5 1316 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 VWA3AA6NCI4 1184 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 EXOC3O60645 756 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 TBC1D8O95759 1140 aa5.62□□□□□ -1.51
NF1-219ENST00000579081 RLBP1P12271 317 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms