RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 ZFYP08048 801 aaPredicted RBP27.41■■□□□ 1.98
CDKN2A-212ENST00000578845 ICA1Q05084 483 aa27.41■■□□□ 1.98
CDKN2A-212ENST00000578845 APPBP2Q92624 585 aa27.41■■□□□ 1.98
CDKN2A-212ENST00000578845 DPF3Q92784 378 aa27.41■■□□□ 1.98
CDKN2A-212ENST00000578845 SH2D4AQ9H788 454 aa27.41■■□□□ 1.98
CDKN2A-212ENST00000578845 ARHGEF10LQ9HCE6 1279 aa27.41■■□□□ 1.98
CDKN2A-212ENST00000578845 RLFQ13129 1914 aa27.4■■□□□ 1.98
CDKN2A-212ENST00000578845 GLRX3O76003 335 aaKnown RBP27.4■■□□□ 1.98
CDKN2A-212ENST00000578845 ZKSCAN1P17029 563 aaPredicted RBP27.4■■□□□ 1.98
CDKN2A-212ENST00000578845 COG2Q14746 738 aa27.4■■□□□ 1.98
CDKN2A-212ENST00000578845 SBK1Q52WX2 424 aa27.4■■□□□ 1.98
CDKN2A-212ENST00000578845 KIAA1755Q5JYT7 1200 aa27.4■■□□□ 1.98
CDKN2A-212ENST00000578845 OSBP2Q969R2 916 aa27.4■■□□□ 1.98
CDKN2A-212ENST00000578845 HOXC10Q9NYD6 342 aa27.4■■□□□ 1.98
CDKN2A-212ENST00000578845 ROBO3Q96MS0 1386 aa27.39■■□□□ 1.98
CDKN2A-212ENST00000578845 GSG1L2A8MUP6 293 aa27.39■■□□□ 1.98
CDKN2A-212ENST00000578845 RNF113AO15541 343 aaKnown RBP27.39■■□□□ 1.98
CDKN2A-212ENST00000578845 PRKAR2AP13861 404 aaKnown RBP27.39■■□□□ 1.98
CDKN2A-212ENST00000578845 MAP2K5Q13163 448 aa27.39■■□□□ 1.98
CDKN2A-212ENST00000578845 CLEC10AQ8IUN9 316 aa27.39■■□□□ 1.98
CDKN2A-212ENST00000578845 VCPKMTQ9H867 229 aa27.39■■□□□ 1.98
CDKN2A-212ENST00000578845 SLC15A5A6NIM6 579 aa27.38■■□□□ 1.97
CDKN2A-212ENST00000578845 PTPREP23469 700 aa27.38■■□□□ 1.97
CDKN2A-212ENST00000578845 PI4K2BQ8TCG2 481 aa27.38■■□□□ 1.97
CDKN2A-212ENST00000578845 HOXC6P09630 235 aa27.37■■□□□ 1.97
CDKN2A-212ENST00000578845 GRB14Q14449 540 aa27.37■■□□□ 1.97
CDKN2A-212ENST00000578845 CCL14Q16627 93 aa27.37■■□□□ 1.97
CDKN2A-212ENST00000578845 MB21D1Q8N884 522 aa27.37■■□□□ 1.97
CDKN2A-212ENST00000578845 TANGO6Q9C0B7 1094 aa27.37■■□□□ 1.97
CDKN2A-212ENST00000578845 KANSL2Q9H9L4 492 aa27.37■■□□□ 1.97
CDKN2A-212ENST00000578845 CWC22Q9HCG8 908 aaKnown RBP27.37■■□□□ 1.97
CDKN2A-212ENST00000578845 OGDHLQ9ULD0 1010 aa27.37■■□□□ 1.97
CDKN2A-212ENST00000578845 COLQQ9Y215 455 aaPredicted RBP27.37■■□□□ 1.97
CDKN2A-212ENST00000578845 GREB1LQ9C091 1923 aaPredicted RBP27.36■■□□□ 1.97
CDKN2A-212ENST00000578845 ERC2O15083 957 aa27.36■■□□□ 1.97
CDKN2A-212ENST00000578845 CACNB2Q08289 660 aaPredicted RBP27.36■■□□□ 1.97
CDKN2A-212ENST00000578845 PAWRQ96IZ0 340 aaKnown RBP27.36■■□□□ 1.97
CDKN2A-212ENST00000578845 ZNF236Q9UL36 1845 aa27.35■■□□□ 1.97
CDKN2A-212ENST00000578845 WDR46O15213 610 aaKnown RBP27.35■■□□□ 1.97
CDKN2A-212ENST00000578845 GPAA1O43292 621 aa27.35■■□□□ 1.97
CDKN2A-212ENST00000578845 GNAT2P19087 354 aa27.35■■□□□ 1.97
CDKN2A-212ENST00000578845 DSG3P32926 999 aa27.35■■□□□ 1.97
CDKN2A-212ENST00000578845 MNX1P50219 401 aaPredicted RBP27.35■■□□□ 1.97
CDKN2A-212ENST00000578845 LRRFIP1Q32MZ4 808 aaKnown RBP27.35■■□□□ 1.97
CDKN2A-212ENST00000578845 NECAB2Q7Z6G3 386 aa27.35■■□□□ 1.97
CDKN2A-212ENST00000578845 SHCBP1Q8NEM2 672 aa27.35■■□□□ 1.97
CDKN2A-212ENST00000578845 DIS3LQ8TF46 1054 aaKnown RBP27.35■■□□□ 1.97
CDKN2A-212ENST00000578845 NR2E3Q9Y5X4 410 aa27.35■■□□□ 1.97
CDKN2A-212ENST00000578845 EEF2P13639 858 aaKnown RBP27.34■■□□□ 1.97
CDKN2A-212ENST00000578845 OTUD7AQ8TE49 926 aaPredicted RBP27.34■■□□□ 1.97
CDKN2A-212ENST00000578845 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.34■■□□□ 1.97
CDKN2A-212ENST00000578845 MOV10L1Q9BXT6 1211 aaKnown RBP27.34■■□□□ 1.97
CDKN2A-212ENST00000578845 SPATC1LQ9H0A9 340 aa27.34■■□□□ 1.97
CDKN2A-212ENST00000578845 EPB41L4AQ9HCS5 686 aaPredicted RBP27.34■■□□□ 1.97
CDKN2A-212ENST00000578845 IVNS1ABPQ9Y6Y0 642 aa27.34■■□□□ 1.97
CDKN2A-212ENST00000578845 SALL3Q9BXA9 1300 aa27.34■■□□□ 1.97
CDKN2A-212ENST00000578845 IGHA2P01877 340 aa27.33■■□□□ 1.97
CDKN2A-212ENST00000578845 WDR78Q5VTH9 848 aa27.33■■□□□ 1.97
CDKN2A-212ENST00000578845 SPICE1Q8N0Z3 855 aa27.33■■□□□ 1.97
CDKN2A-212ENST00000578845 M0R2C6 588 aa27.32■■□□□ 1.96
CDKN2A-212ENST00000578845 FLOT1O75955 427 aa27.32■■□□□ 1.96
CDKN2A-212ENST00000578845 RASA1P20936 1047 aa27.32■■□□□ 1.96
CDKN2A-212ENST00000578845 FLRT1Q9NZU1 646 aa27.32■■□□□ 1.96
CDKN2A-212ENST00000578845 TRIOBPQ9H2D6 2365 aa27.32■■□□□ 1.96
CDKN2A-212ENST00000578845 PARP14Q460N5 1801 aa27.32■■□□□ 1.96
CDKN2A-212ENST00000578845 STRNO43815 780 aa27.31■■□□□ 1.96
CDKN2A-212ENST00000578845 MX1P20591 662 aa27.31■■□□□ 1.96
CDKN2A-212ENST00000578845 CRBNQ96SW2 442 aa27.31■■□□□ 1.96
CDKN2A-212ENST00000578845 NBPF3Q9H094 633 aa27.31■■□□□ 1.96
CDKN2A-212ENST00000578845 ADAMTS5Q9UNA0 930 aa27.31■■□□□ 1.96
CDKN2A-212ENST00000578845 EVI5O60447 810 aa27.3■■□□□ 1.96
CDKN2A-212ENST00000578845 CCND3P30281 292 aaPredicted RBP27.3■■□□□ 1.96
CDKN2A-212ENST00000578845 LHX8Q68G74 356 aa27.3■■□□□ 1.96
CDKN2A-212ENST00000578845 ATG4CQ96DT6 458 aa27.3■■□□□ 1.96
CDKN2A-212ENST00000578845 PRO3102Q9H379 93 aa27.3■■□□□ 1.96
CDKN2A-212ENST00000578845 GOPCQ9HD26 462 aa27.3■■□□□ 1.96
CDKN2A-212ENST00000578845 PCDH10Q9P2E7 1040 aa27.3■■□□□ 1.96
CDKN2A-212ENST00000578845 ERCC3P19447 782 aa27.29■■□□□ 1.96
CDKN2A-212ENST00000578845 FXR1P51114 621 aaKnown RBP eCLIP27.29■■□□□ 1.96
CDKN2A-212ENST00000578845 MFSD14CQ5VZR4 134 aa27.29■■□□□ 1.96
CDKN2A-212ENST00000578845 CHRDL2Q6WN34 429 aa27.29■■□□□ 1.96
CDKN2A-212ENST00000578845 NPLOC4Q8TAT6 608 aa27.29■■□□□ 1.96
CDKN2A-212ENST00000578845 MROH8Q9H579 483 aa27.29■■□□□ 1.96
CDKN2A-212ENST00000578845 ALPK3Q96L96 1907 aa27.29■■□□□ 1.96
CDKN2A-212ENST00000578845 SZT2Q5T011 3432 aa27.28■■□□□ 1.96
CDKN2A-212ENST00000578845 MINDY4BA8MYZ0 360 aa27.28■■□□□ 1.96
CDKN2A-212ENST00000578845 PATL2C9JE40 543 aaKnown RBP27.28■■□□□ 1.96
CDKN2A-212ENST00000578845 TDO2P48775 406 aa27.28■■□□□ 1.96
CDKN2A-212ENST00000578845 HDAC1Q13547 482 aaPredicted RBP27.28■■□□□ 1.96
CDKN2A-212ENST00000578845 ZMYM1Q5SVZ6 1142 aa27.28■■□□□ 1.96
CDKN2A-212ENST00000578845 ABRAQ8N0Z2 381 aa27.28■■□□□ 1.96
CDKN2A-212ENST00000578845 MKNK2Q9HBH9 465 aa27.28■■□□□ 1.96
CDKN2A-212ENST00000578845 NYAP2Q9P242 653 aa27.28■■□□□ 1.96
CDKN2A-212ENST00000578845 ADORA2AP29274 412 aa27.27■■□□□ 1.96
CDKN2A-212ENST00000578845 ATP2B2Q01814 1243 aa27.27■■□□□ 1.96
CDKN2A-212ENST00000578845 IFNL3Q8IZI9 196 aa27.27■■□□□ 1.96
CDKN2A-212ENST00000578845 FSD1Q9BTV5 496 aa27.27■■□□□ 1.96
CDKN2A-212ENST00000578845 C11orf49Q9H6J7 331 aa27.27■■□□□ 1.96
CDKN2A-212ENST00000578845 LAMA3Q16787 3333 aa27.26■■□□□ 1.95
CDKN2A-212ENST00000578845 IGKV6D-41A0A0C4DH26 115 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms