RNA–Protein interactions for RNA: ENST00000570021.1

SIN3A-213, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 3

Gene SIN3A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-213ENST00000570021 PXDNQ92626 1479 aa7.55□□□□□ -1.2
SIN3A-213ENST00000570021 RAP1GAPP47736 663 aa7.54□□□□□ -1.2
SIN3A-213ENST00000570021 KCNMB1Q16558 191 aa7.54□□□□□ -1.2
SIN3A-213ENST00000570021 MLANAQ16655 118 aa7.54□□□□□ -1.2
SIN3A-213ENST00000570021 MARF1Q9Y4F3 1742 aaKnown RBP7.54□□□□□ -1.2
SIN3A-213ENST00000570021 ROBO2Q9HCK4 1378 aa7.54□□□□□ -1.2
SIN3A-213ENST00000570021 UTRNP46939 3433 aa7.54□□□□□ -1.2
SIN3A-213ENST00000570021 RPRD2Q5VT52 1461 aaKnown RBP7.54□□□□□ -1.2
SIN3A-213ENST00000570021 SPHKAPQ2M3C7 1700 aa7.53□□□□□ -1.2
SIN3A-213ENST00000570021 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.53□□□□□ -1.2
SIN3A-213ENST00000570021 ZNF503-AS2A6NEH8 195 aa7.53□□□□□ -1.2
SIN3A-213ENST00000570021 RNGTTO60942 597 aaKnown RBP7.53□□□□□ -1.2
SIN3A-213ENST00000570021 NEFLP07196 543 aa7.53□□□□□ -1.2
SIN3A-213ENST00000570021 C1QTNF8P60827 252 aa7.53□□□□□ -1.2
SIN3A-213ENST00000570021 TTLL4Q14679 1199 aa7.53□□□□□ -1.2
SIN3A-213ENST00000570021 KIF4BQ2VIQ3 1234 aa7.53□□□□□ -1.2
SIN3A-213ENST00000570021 RPS26P11Q5JNZ5 115 aaPredicted RBP7.53□□□□□ -1.2
SIN3A-213ENST00000570021 USPL1Q5W0Q7 1092 aa7.53□□□□□ -1.2
SIN3A-213ENST00000570021 CCER1Q8TC90 406 aaPredicted RBP7.53□□□□□ -1.2
SIN3A-213ENST00000570021 ZC3H12CQ9C0D7 883 aaKnown RBP7.53□□□□□ -1.2
SIN3A-213ENST00000570021 TNKS2Q9H2K2 1166 aa7.53□□□□□ -1.2
SIN3A-213ENST00000570021 PCOLCE2Q9UKZ9 415 aa7.53□□□□□ -1.2
SIN3A-213ENST00000570021 CCDC9Q9Y3X0 531 aaKnown RBP7.53□□□□□ -1.2
SIN3A-213ENST00000570021 PCDHGC5Q9Y5F6 944 aa7.53□□□□□ -1.2
SIN3A-213ENST00000570021 SNX11Q9Y5W9 270 aa7.53□□□□□ -1.2
SIN3A-213ENST00000570021 CROCC2H7BZ55 1655 aa7.52□□□□□ -1.21
SIN3A-213ENST00000570021 ANKRD30AQ9BXX3 1397 aa7.52□□□□□ -1.21
SIN3A-213ENST00000570021 ZNF862O60290 1169 aa7.52□□□□□ -1.21
SIN3A-213ENST00000570021 TSPAN15O95858 294 aa7.52□□□□□ -1.21
SIN3A-213ENST00000570021 ZNF865P0CJ78 1059 aaPredicted RBP7.52□□□□□ -1.21
SIN3A-213ENST00000570021 HCLS1P14317 486 aaPredicted RBP7.52□□□□□ -1.21
SIN3A-213ENST00000570021 ITIH2P19823 946 aa7.52□□□□□ -1.21
SIN3A-213ENST00000570021 CFPP27918 469 aa7.52□□□□□ -1.21
SIN3A-213ENST00000570021 PPP1R16BQ96T49 567 aa7.52□□□□□ -1.21
SIN3A-213ENST00000570021 PRDM7Q9NQW5 492 aa7.52□□□□□ -1.21
SIN3A-213ENST00000570021 KRT82Q9NSB4 513 aa7.52□□□□□ -1.21
SIN3A-213ENST00000570021 SERPINA10Q9UK55 444 aa7.52□□□□□ -1.21
SIN3A-213ENST00000570021 NPHP3Q7Z494 1330 aa7.52□□□□□ -1.21
SIN3A-213ENST00000570021 CAMTA1Q9Y6Y1 1673 aa7.51□□□□□ -1.21
SIN3A-213ENST00000570021 FAM83GA6ND36 823 aa7.51□□□□□ -1.21
SIN3A-213ENST00000570021 TMEM88BA6NKF7 163 aa7.51□□□□□ -1.21
SIN3A-213ENST00000570021 ZSCAN18Q8TBC5 510 aaPredicted RBP7.51□□□□□ -1.21
SIN3A-213ENST00000570021 ABCB6Q9NP58 842 aa7.51□□□□□ -1.21
SIN3A-213ENST00000570021 NPHS2Q9NP85 383 aa7.51□□□□□ -1.21
SIN3A-213ENST00000570021 SPATA31A3Q5VYP0 1347 aa7.51□□□□□ -1.21
SIN3A-213ENST00000570021 ABL1P00519 1130 aa7.5□□□□□ -1.21
SIN3A-213ENST00000570021 GSTP1P09211 210 aaKnown RBP7.5□□□□□ -1.21
SIN3A-213ENST00000570021 PRPF40BQ6NWY9 871 aaKnown RBP7.5□□□□□ -1.21
SIN3A-213ENST00000570021 TOP6BLQ8N6T0 577 aa7.5□□□□□ -1.21
SIN3A-213ENST00000570021 ASB11Q8WXH4 323 aa7.5□□□□□ -1.21
SIN3A-213ENST00000570021 ANO2Q9NQ90 1003 aa7.5□□□□□ -1.21
SIN3A-213ENST00000570021 PTPN23Q9H3S7 1636 aa7.49□□□□□ -1.21
SIN3A-213ENST00000570021 E9PCH4 1651 aa7.49□□□□□ -1.21
SIN3A-213ENST00000570021 KCNQ2O43526 872 aa7.49□□□□□ -1.21
SIN3A-213ENST00000570021 TRIM37O94972 964 aa7.49□□□□□ -1.21
SIN3A-213ENST00000570021 ZNF157P51786 506 aaPredicted RBP7.49□□□□□ -1.21
SIN3A-213ENST00000570021 ZNF211Q13398 564 aaPredicted RBP7.49□□□□□ -1.21
SIN3A-213ENST00000570021 IKZF1Q13422 519 aa7.49□□□□□ -1.21
SIN3A-213ENST00000570021 ZNF326Q5BKZ1 582 aaKnown RBP7.49□□□□□ -1.21
SIN3A-213ENST00000570021 C1QL4Q86Z23 238 aa7.49□□□□□ -1.21
SIN3A-213ENST00000570021 DISP2A7MBM2 1401 aa7.49□□□□□ -1.21
SIN3A-213ENST00000570021 CPNE3O75131 537 aaKnown RBP7.48□□□□□ -1.21
SIN3A-213ENST00000570021 NEFMP07197 916 aa7.48□□□□□ -1.21
SIN3A-213ENST00000570021 ZP2Q05996 745 aa7.48□□□□□ -1.21
SIN3A-213ENST00000570021 FAAP100Q0VG06 881 aa7.48□□□□□ -1.21
SIN3A-213ENST00000570021 LILRA6Q6PI73 481 aa7.48□□□□□ -1.21
SIN3A-213ENST00000570021 KRT28Q7Z3Y7 464 aa7.48□□□□□ -1.21
SIN3A-213ENST00000570021 SIAH1Q8IUQ4 282 aa7.48□□□□□ -1.21
SIN3A-213ENST00000570021 LRRC56Q8IYG6 542 aaPredicted RBP7.48□□□□□ -1.21
SIN3A-213ENST00000570021 LIN37Q96GY3 246 aaPredicted RBP7.48□□□□□ -1.21
SIN3A-213ENST00000570021 PDGFDQ9GZP0 370 aaPredicted RBP7.48□□□□□ -1.21
SIN3A-213ENST00000570021 SSU72Q9NP77 194 aaKnown RBP7.48□□□□□ -1.21
SIN3A-213ENST00000570021 ANKRD50Q9ULJ7 1429 aa7.48□□□□□ -1.21
SIN3A-213ENST00000570021 CTNND2Q9UQB3 1225 aa7.48□□□□□ -1.21
SIN3A-213ENST00000570021 ADGRL2O95490 1459 aa7.48□□□□□ -1.21
SIN3A-213ENST00000570021 TMEM238LA0A1B0GVL6 79 aa7.47□□□□□ -1.21
SIN3A-213ENST00000570021 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.47□□□□□ -1.21
SIN3A-213ENST00000570021 AFMP43652 599 aa7.47□□□□□ -1.21
SIN3A-213ENST00000570021 LCNL1Q6ZST4 164 aa7.47□□□□□ -1.21
SIN3A-213ENST00000570021 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.47□□□□□ -1.21
SIN3A-213ENST00000570021 ISL2Q96A47 359 aa7.47□□□□□ -1.21
SIN3A-213ENST00000570021 HEXIM2Q96MH2 286 aaKnown RBP7.47□□□□□ -1.21
SIN3A-213ENST00000570021 SPON1Q9HCB6 807 aa7.47□□□□□ -1.21
SIN3A-213ENST00000570021 PPP1R1BQ9UD71 204 aaPredicted RBP7.47□□□□□ -1.21
SIN3A-213ENST00000570021 GTF2IRD1Q9UHL9 959 aa7.47□□□□□ -1.21
SIN3A-213ENST00000570021 BRPF3Q9ULD4 1205 aa7.47□□□□□ -1.21
SIN3A-213ENST00000570021 USP32Q8NFA0 1604 aa7.47□□□□□ -1.21
SIN3A-213ENST00000570021 RGPD1P0DJD0 1748 aa7.47□□□□□ -1.21
SIN3A-213ENST00000570021 TNS1Q9HBL0 1735 aaKnown RBP7.47□□□□□ -1.21
SIN3A-213ENST00000570021 ORC1Q13415 861 aa7.46□□□□□ -1.22
SIN3A-213ENST00000570021 LCE5AQ5TCM9 118 aa7.46□□□□□ -1.22
SIN3A-213ENST00000570021 PHLDB3Q6NSJ2 640 aa7.46□□□□□ -1.22
SIN3A-213ENST00000570021 WAPLQ7Z5K2 1190 aa7.46□□□□□ -1.22
SIN3A-213ENST00000570021 BTG4Q9NY30 223 aa7.46□□□□□ -1.22
SIN3A-213ENST00000570021 TRAK1Q9UPV9 953 aa7.46□□□□□ -1.22
SIN3A-213ENST00000570021 NINLQ9Y2I6 1382 aa7.46□□□□□ -1.22
SIN3A-213ENST00000570021 IGF2BP3O00425 579 aaKnown RBP eCLIP7.45□□□□□ -1.22
SIN3A-213ENST00000570021 FYB2Q5VWT5 728 aa7.45□□□□□ -1.22
SIN3A-213ENST00000570021 SYDE1Q6ZW31 735 aaPredicted RBP7.45□□□□□ -1.22
SIN3A-213ENST00000570021 FAM214BQ7L5A3 538 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms