RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 CCL14Q16627 93 aa22.73■■□□□ 1.23
SPSB3-210ENST00000568416 TSHZ3Q63HK5 1081 aa22.73■■□□□ 1.23
SPSB3-210ENST00000568416 DIS3LQ8TF46 1054 aaKnown RBP22.73■■□□□ 1.23
SPSB3-210ENST00000568416 ARHGEF10LQ9HCE6 1279 aa22.73■■□□□ 1.23
SPSB3-210ENST00000568416 CWC22Q9HCG8 908 aaKnown RBP22.73■■□□□ 1.23
SPSB3-210ENST00000568416 TMX2Q9Y320 296 aa22.73■■□□□ 1.23
SPSB3-210ENST00000568416 NR2E3Q9Y5X4 410 aa22.73■■□□□ 1.23
SPSB3-210ENST00000568416 SLC15A5A6NIM6 579 aa22.72■■□□□ 1.23
SPSB3-210ENST00000568416 MNX1P50219 401 aaPredicted RBP22.72■■□□□ 1.23
SPSB3-210ENST00000568416 NECAB2Q7Z6G3 386 aa22.72■■□□□ 1.23
SPSB3-210ENST00000568416 APPBP2Q92624 585 aa22.72■■□□□ 1.23
SPSB3-210ENST00000568416 LPAR1Q92633 364 aa22.72■■□□□ 1.23
SPSB3-210ENST00000568416 OSBP2Q969R2 916 aa22.72■■□□□ 1.23
SPSB3-210ENST00000568416 VCPKMTQ9H867 229 aa22.72■■□□□ 1.23
SPSB3-210ENST00000568416 HOXC10Q9NYD6 342 aa22.72■■□□□ 1.23
SPSB3-210ENST00000568416 ARPP21Q9UBL0 812 aaPredicted RBP22.72■■□□□ 1.23
SPSB3-210ENST00000568416 OGDHLQ9ULD0 1010 aa22.72■■□□□ 1.23
SPSB3-210ENST00000568416 SBK1Q52WX2 424 aa22.71■■□□□ 1.23
SPSB3-210ENST00000568416 CHRDL2Q6WN34 429 aa22.71■■□□□ 1.23
SPSB3-210ENST00000568416 TANGO6Q9C0B7 1094 aa22.71■■□□□ 1.23
SPSB3-210ENST00000568416 SH2D4AQ9H788 454 aa22.71■■□□□ 1.23
SPSB3-210ENST00000568416 PCDH10Q9P2E7 1040 aa22.71■■□□□ 1.23
SPSB3-210ENST00000568416 GSG1L2A8MUP6 293 aa22.7■■□□□ 1.22
SPSB3-210ENST00000568416 RNF113AO15541 343 aaKnown RBP22.7■■□□□ 1.22
SPSB3-210ENST00000568416 FXR1P51114 621 aaKnown RBP eCLIP22.7■■□□□ 1.22
SPSB3-210ENST00000568416 RRP1P56182 461 aaKnown RBP22.7■■□□□ 1.22
SPSB3-210ENST00000568416 GRB14Q14449 540 aa22.7■■□□□ 1.22
SPSB3-210ENST00000568416 WDR78Q5VTH9 848 aa22.7■■□□□ 1.22
SPSB3-210ENST00000568416 MYH7P12883 1935 aa22.7■■□□□ 1.22
SPSB3-210ENST00000568416 TTC41PQ6P2S7 1318 aa22.69■■□□□ 1.22
SPSB3-210ENST00000568416 EVI5O60447 810 aa22.69■■□□□ 1.22
SPSB3-210ENST00000568416 ZFYP08048 801 aaPredicted RBP22.69■■□□□ 1.22
SPSB3-210ENST00000568416 HOXC6P09630 235 aa22.69■■□□□ 1.22
SPSB3-210ENST00000568416 DSG3P32926 999 aa22.69■■□□□ 1.22
SPSB3-210ENST00000568416 GIMAP6Q6P9H5 292 aa22.69■■□□□ 1.22
SPSB3-210ENST00000568416 MOV10L1Q9BXT6 1211 aaKnown RBP22.69■■□□□ 1.22
SPSB3-210ENST00000568416 FLRT1Q9NZU1 646 aa22.69■■□□□ 1.22
SPSB3-210ENST00000568416 IVNS1ABPQ9Y6Y0 642 aa22.69■■□□□ 1.22
SPSB3-210ENST00000568416 BAZ2AQ9UIF9 1905 aaKnown RBP22.69■■□□□ 1.22
SPSB3-210ENST00000568416 WDR46O15213 610 aaKnown RBP22.68■■□□□ 1.22
SPSB3-210ENST00000568416 EEF2P13639 858 aaKnown RBP22.68■■□□□ 1.22
SPSB3-210ENST00000568416 CCND3P30281 292 aaPredicted RBP22.68■■□□□ 1.22
SPSB3-210ENST00000568416 SPICE1Q8N0Z3 855 aa22.68■■□□□ 1.22
SPSB3-210ENST00000568416 SHCBP1Q8NEM2 672 aa22.68■■□□□ 1.22
SPSB3-210ENST00000568416 PI4K2BQ8TCG2 481 aa22.68■■□□□ 1.22
SPSB3-210ENST00000568416 NBPF3Q9H094 633 aa22.68■■□□□ 1.22
SPSB3-210ENST00000568416 SPATC1LQ9H0A9 340 aa22.68■■□□□ 1.22
SPSB3-210ENST00000568416 PRO3102Q9H379 93 aa22.68■■□□□ 1.22
SPSB3-210ENST00000568416 KANSL2Q9H9L4 492 aa22.68■■□□□ 1.22
SPSB3-210ENST00000568416 A0A0G2JMZ2 1700 aa22.68■■□□□ 1.22
SPSB3-210ENST00000568416 LHX8Q68G74 356 aa22.67■■□□□ 1.22
SPSB3-210ENST00000568416 MB21D1Q8N884 522 aa22.67■■□□□ 1.22
SPSB3-210ENST00000568416 NPLOC4Q8TAT6 608 aa22.67■■□□□ 1.22
SPSB3-210ENST00000568416 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.67■■□□□ 1.22
SPSB3-210ENST00000568416 ROBO3Q96MS0 1386 aa22.66■■□□□ 1.22
SPSB3-210ENST00000568416 GPAA1O43292 621 aa22.66■■□□□ 1.22
SPSB3-210ENST00000568416 FLOT1O75955 427 aa22.66■■□□□ 1.22
SPSB3-210ENST00000568416 OTUD7AQ8TE49 926 aaPredicted RBP22.66■■□□□ 1.22
SPSB3-210ENST00000568416 ATG4CQ96DT6 458 aa22.66■■□□□ 1.22
SPSB3-210ENST00000568416 C11orf49Q9H6J7 331 aa22.66■■□□□ 1.22
SPSB3-210ENST00000568416 EPB41L4AQ9HCS5 686 aaPredicted RBP22.66■■□□□ 1.22
SPSB3-210ENST00000568416 RBM27Q9P2N5 1060 aaKnown RBP22.66■■□□□ 1.22
SPSB3-210ENST00000568416 RLFQ13129 1914 aa22.65■■□□□ 1.22
SPSB3-210ENST00000568416 M0R2C6 588 aa22.65■■□□□ 1.22
SPSB3-210ENST00000568416 ERC2O15083 957 aa22.65■■□□□ 1.22
SPSB3-210ENST00000568416 STRNO43815 780 aa22.65■■□□□ 1.22
SPSB3-210ENST00000568416 IGHA2P01877 340 aa22.65■■□□□ 1.22
SPSB3-210ENST00000568416 RASA1P20936 1047 aa22.65■■□□□ 1.22
SPSB3-210ENST00000568416 MFSD14CQ5VZR4 134 aa22.65■■□□□ 1.22
SPSB3-210ENST00000568416 GNAT2P19087 354 aa22.64■■□□□ 1.21
SPSB3-210ENST00000568416 ERCC3P19447 782 aa22.64■■□□□ 1.21
SPSB3-210ENST00000568416 ATP2B2Q01814 1243 aa22.64■■□□□ 1.21
SPSB3-210ENST00000568416 LRRFIP1Q32MZ4 808 aaKnown RBP22.64■■□□□ 1.21
SPSB3-210ENST00000568416 ADAMTS5Q9UNA0 930 aa22.64■■□□□ 1.21
SPSB3-210ENST00000568416 SALL3Q9BXA9 1300 aa22.63■■□□□ 1.21
SPSB3-210ENST00000568416 MYH8P13535 1937 aa22.63■■□□□ 1.21
SPSB3-210ENST00000568416 MINDY4BA8MYZ0 360 aa22.63■■□□□ 1.21
SPSB3-210ENST00000568416 ADORA2AP29274 412 aa22.63■■□□□ 1.21
SPSB3-210ENST00000568416 CRBNQ96SW2 442 aa22.63■■□□□ 1.21
SPSB3-210ENST00000568416 MROH8Q9H579 483 aa22.63■■□□□ 1.21
SPSB3-210ENST00000568416 ZNF236Q9UL36 1845 aa22.63■■□□□ 1.21
SPSB3-210ENST00000568416 PFASO15067 1338 aa22.62■■□□□ 1.21
SPSB3-210ENST00000568416 PATL2C9JE40 543 aaKnown RBP22.62■■□□□ 1.21
SPSB3-210ENST00000568416 COL6A1P12109 1028 aa22.62■■□□□ 1.21
SPSB3-210ENST00000568416 PLS1Q14651 629 aa22.62■■□□□ 1.21
SPSB3-210ENST00000568416 DPP9Q86TI2 863 aa22.62■■□□□ 1.21
SPSB3-210ENST00000568416 STK11IPQ8N1F8 1099 aa22.62■■□□□ 1.21
SPSB3-210ENST00000568416 SEC62Q99442 399 aaKnown RBP22.62■■□□□ 1.21
SPSB3-210ENST00000568416 MKNK2Q9HBH9 465 aa22.62■■□□□ 1.21
SPSB3-210ENST00000568416 GOPCQ9HD26 462 aa22.62■■□□□ 1.21
SPSB3-210ENST00000568416 FBXO28Q9NVF7 368 aa22.62■■□□□ 1.21
SPSB3-210ENST00000568416 GREB1LQ9C091 1923 aaPredicted RBP22.61■■□□□ 1.21
SPSB3-210ENST00000568416 MX1P20591 662 aa22.61■■□□□ 1.21
SPSB3-210ENST00000568416 CYP2C19P33261 490 aa22.61■■□□□ 1.21
SPSB3-210ENST00000568416 TDO2P48775 406 aa22.61■■□□□ 1.21
SPSB3-210ENST00000568416 TMEM132BQ14DG7 1078 aa22.61■■□□□ 1.21
SPSB3-210ENST00000568416 OLFML2BQ68BL8 750 aa22.61■■□□□ 1.21
SPSB3-210ENST00000568416 NCAPG2Q86XI2 1143 aa22.61■■□□□ 1.21
SPSB3-210ENST00000568416 C7orf61Q8IZ16 206 aa22.61■■□□□ 1.21
SPSB3-210ENST00000568416 IFNL3Q8IZI9 196 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms