RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 SYNGAP1Q96PV0 1343 aa5.69□□□□□ -1.5
HERC1-211ENST00000560983 ROCK1Q13464 1354 aa5.68□□□□□ -1.5
HERC1-211ENST00000560983 ANKRD30BQ9BXX2 1392 aa5.68□□□□□ -1.5
HERC1-211ENST00000560983 PARP4Q9UKK3 1724 aaKnown RBP5.68□□□□□ -1.5
HERC1-211ENST00000560983 FAM95CA0A1B0GW59 222 aa5.68□□□□□ -1.5
HERC1-211ENST00000560983 WNT11O96014 354 aa5.68□□□□□ -1.5
HERC1-211ENST00000560983 SERPINB4P48594 390 aa5.68□□□□□ -1.5
HERC1-211ENST00000560983 PTPN12Q05209 780 aaKnown RBP5.68□□□□□ -1.5
HERC1-211ENST00000560983 PRPF40BQ6NWY9 871 aaKnown RBP5.68□□□□□ -1.5
HERC1-211ENST00000560983 ZNF576Q9H609 170 aa5.68□□□□□ -1.5
HERC1-211ENST00000560983 PRKAG2Q9UGJ0 569 aa5.68□□□□□ -1.5
HERC1-211ENST00000560983 ADGRE2Q9UHX3 823 aa5.68□□□□□ -1.5
HERC1-211ENST00000560983 USP19O94966 1318 aa5.68□□□□□ -1.5
HERC1-211ENST00000560983 IGSF1Q8N6C5 1336 aa5.68□□□□□ -1.5
HERC1-211ENST00000560983 WDR90Q96KV7 1748 aa5.68□□□□□ -1.5
HERC1-211ENST00000560983 CRYBG1Q9Y4K1 1723 aa5.68□□□□□ -1.5
HERC1-211ENST00000560983 USP6P35125 1406 aa5.67□□□□□ -1.5
HERC1-211ENST00000560983 H3BRB1 525 aa5.67□□□□□ -1.5
HERC1-211ENST00000560983 NEFLP07196 543 aa5.67□□□□□ -1.5
HERC1-211ENST00000560983 TAL1P17542 331 aaPredicted RBP5.67□□□□□ -1.5
HERC1-211ENST00000560983 ADMP35318 185 aa5.67□□□□□ -1.5
HERC1-211ENST00000560983 RGL3Q3MIN7 710 aa5.67□□□□□ -1.5
HERC1-211ENST00000560983 PAOXQ6QHF9 649 aa5.67□□□□□ -1.5
HERC1-211ENST00000560983 SEZ6L2Q6UXD5 910 aa5.67□□□□□ -1.5
HERC1-211ENST00000560983 ZAR1Q86SH2 424 aa5.67□□□□□ -1.5
HERC1-211ENST00000560983 C16orf71Q8IYS4 520 aaPredicted RBP5.67□□□□□ -1.5
HERC1-211ENST00000560983 FBLIM1Q8WUP2 373 aa5.67□□□□□ -1.5
HERC1-211ENST00000560983 CITED4Q96RK1 184 aa5.67□□□□□ -1.5
HERC1-211ENST00000560983 METTL22Q9BUU2 404 aaPredicted RBP5.67□□□□□ -1.5
HERC1-211ENST00000560983 TUT1Q9H6E5 874 aaKnown RBP5.67□□□□□ -1.5
HERC1-211ENST00000560983 BRPF3Q9ULD4 1205 aa5.67□□□□□ -1.5
HERC1-211ENST00000560983 ACTL7BQ9Y614 415 aa5.67□□□□□ -1.5
HERC1-211ENST00000560983 COL24A1Q17RW2 1714 aa5.67□□□□□ -1.5
HERC1-211ENST00000560983 SBF2Q86WG5 1849 aa5.67□□□□□ -1.5
HERC1-211ENST00000560983 BRD4O60885 1362 aaPredicted RBP5.67□□□□□ -1.5
HERC1-211ENST00000560983 LMO7Q8WWI1 1683 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 RGPD8O14715 1765 aaPredicted RBP5.66□□□□□ -1.5
HERC1-211ENST00000560983 TULP4Q9NRJ4 1543 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 PAX4O43316 350 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 CYP11A1P05108 521 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 MAOBP27338 520 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 POU4F3Q15319 338 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 SMC1BQ8NDV3 1235 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 GIMAP7Q8NHV1 300 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 KRTAP9-9Q9BYP9 154 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 DNAJC25Q9H1X3 360 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 ACSS3Q9H6R3 686 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 ABCB6Q9NP58 842 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 ATG3Q9NT62 314 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 POGKQ9P215 609 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 LEMD3Q9Y2U8 911 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 WDR17Q8IZU2 1322 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 LRRC37A3O60309 1634 aa5.66□□□□□ -1.5
HERC1-211ENST00000560983 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.65□□□□□ -1.5
HERC1-211ENST00000560983 ECEL1O95672 775 aa5.65□□□□□ -1.5
HERC1-211ENST00000560983 ORC1Q13415 861 aa5.65□□□□□ -1.5
HERC1-211ENST00000560983 NFKBIBQ15653 356 aa5.65□□□□□ -1.5
HERC1-211ENST00000560983 RPS26P11Q5JNZ5 115 aaPredicted RBP5.65□□□□□ -1.5
HERC1-211ENST00000560983 HP1BP3Q5SSJ5 553 aaPredicted RBP5.65□□□□□ -1.5
HERC1-211ENST00000560983 CBLL1Q75N03 491 aa5.65□□□□□ -1.5
HERC1-211ENST00000560983 GLYCTKQ8IVS8 523 aa5.65□□□□□ -1.5
HERC1-211ENST00000560983 YIPF2Q9BWQ6 316 aa5.65□□□□□ -1.5
HERC1-211ENST00000560983 OSBPL1AQ9BXW6 950 aa5.65□□□□□ -1.5
HERC1-211ENST00000560983 ZFYVE1Q9HBF4 777 aa5.65□□□□□ -1.5
HERC1-211ENST00000560983 NPHS2Q9NP85 383 aa5.65□□□□□ -1.5
HERC1-211ENST00000560983 CCDC39Q9UFE4 941 aa5.65□□□□□ -1.5
HERC1-211ENST00000560983 PIK3C2GO75747 1445 aa5.65□□□□□ -1.51
HERC1-211ENST00000560983 CCDC85CA6NKD9 419 aa5.64□□□□□ -1.51
HERC1-211ENST00000560983 GPR182O15218 404 aa5.64□□□□□ -1.51
HERC1-211ENST00000560983 NDUFB5O43674 189 aa5.64□□□□□ -1.51
HERC1-211ENST00000560983 CPNE3O75131 537 aaKnown RBP5.64□□□□□ -1.51
HERC1-211ENST00000560983 CTCFP49711 727 aaPredicted RBP5.64□□□□□ -1.51
HERC1-211ENST00000560983 USP11P51784 963 aa5.64□□□□□ -1.51
HERC1-211ENST00000560983 LBX1P52954 281 aa5.64□□□□□ -1.51
HERC1-211ENST00000560983 C9orf131Q5VYM1 1079 aa5.64□□□□□ -1.51
HERC1-211ENST00000560983 ARHGAP27Q6ZUM4 889 aa5.64□□□□□ -1.51
HERC1-211ENST00000560983 GLIS3Q8NEA6 775 aa5.64□□□□□ -1.51
HERC1-211ENST00000560983 ALKBH8Q96BT7 664 aaKnown RBP5.64□□□□□ -1.51
HERC1-211ENST00000560983 SEMA6CQ9H3T2 930 aa5.64□□□□□ -1.51
HERC1-211ENST00000560983 FAM105AQ9NUU6 356 aa5.64□□□□□ -1.51
HERC1-211ENST00000560983 ARHGEF28Q8N1W1 1705 aaKnown RBP5.64□□□□□ -1.51
HERC1-211ENST00000560983 ACEP12821 1306 aa5.64□□□□□ -1.51
HERC1-211ENST00000560983 ZBTB7CA1YPR0 619 aa5.63□□□□□ -1.51
HERC1-211ENST00000560983 TXKP42681 527 aa5.63□□□□□ -1.51
HERC1-211ENST00000560983 SMIM5Q71RC9 77 aa5.63□□□□□ -1.51
HERC1-211ENST00000560983 VSIG10LQ86VR7 867 aa5.63□□□□□ -1.51
HERC1-211ENST00000560983 ABI1Q8IZP0 508 aa5.63□□□□□ -1.51
HERC1-211ENST00000560983 FBXL6Q8N531 539 aa5.63□□□□□ -1.51
HERC1-211ENST00000560983 TBC1D32Q96NH3 1257 aa5.63□□□□□ -1.51
HERC1-211ENST00000560983 WDR18Q9BV38 432 aa5.63□□□□□ -1.51
HERC1-211ENST00000560983 RBCK1Q9BYM8 510 aa5.63□□□□□ -1.51
HERC1-211ENST00000560983 C1GALT1Q9NS00 363 aa5.63□□□□□ -1.51
HERC1-211ENST00000560983 POLR3AO14802 1390 aaPredicted RBP5.63□□□□□ -1.51
HERC1-211ENST00000560983 C10orf71Q711Q0 1435 aa5.63□□□□□ -1.51
HERC1-211ENST00000560983 FAM170BA6NMN3 283 aa5.62□□□□□ -1.51
HERC1-211ENST00000560983 AOC2O75106 756 aa5.62□□□□□ -1.51
HERC1-211ENST00000560983 FAAP100Q0VG06 881 aa5.62□□□□□ -1.51
HERC1-211ENST00000560983 AP3B2Q13367 1082 aa5.62□□□□□ -1.51
HERC1-211ENST00000560983 MAP7Q14244 749 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms