RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 TXNRD2Q9NNW7 524 aa14.36□□□□□ -0.11
USP8-212ENST00000560730 LAMA4Q16363 1823 aa14.36□□□□□ -0.11
USP8-212ENST00000560730 PARP14Q460N5 1801 aa14.35□□□□□ -0.11
USP8-212ENST00000560730 CAPN15O75808 1086 aa14.35□□□□□ -0.11
USP8-212ENST00000560730 FGRP09769 529 aa14.35□□□□□ -0.11
USP8-212ENST00000560730 GCLCP48506 637 aaPredicted RBP14.35□□□□□ -0.11
USP8-212ENST00000560730 KIF22Q14807 665 aa14.35□□□□□ -0.11
USP8-212ENST00000560730 PKN2Q16513 984 aaKnown RBP14.35□□□□□ -0.11
USP8-212ENST00000560730 FBXO46Q6PJ61 603 aaPredicted RBP14.35□□□□□ -0.11
USP8-212ENST00000560730 TBC1D10CQ8IV04 446 aa14.35□□□□□ -0.11
USP8-212ENST00000560730 DSCC1Q9BVC3 393 aa14.35□□□□□ -0.11
USP8-212ENST00000560730 VCPKMTQ9H867 229 aa14.35□□□□□ -0.11
USP8-212ENST00000560730 MTMR4Q9NYA4 1195 aa14.35□□□□□ -0.11
USP8-212ENST00000560730 NYAP2Q9P242 653 aa14.35□□□□□ -0.11
USP8-212ENST00000560730 RBPJLQ9UBG7 517 aa14.35□□□□□ -0.11
USP8-212ENST00000560730 CLIP2Q9UDT6 1046 aa14.35□□□□□ -0.11
USP8-212ENST00000560730 PLIN4Q96Q06 1357 aa14.34□□□□□ -0.11
USP8-212ENST00000560730 ORC4O43929 436 aa14.34□□□□□ -0.11
USP8-212ENST00000560730 TSPY3P0CV98 308 aa14.34□□□□□ -0.11
USP8-212ENST00000560730 TSPY8P0CW00 308 aa14.34□□□□□ -0.11
USP8-212ENST00000560730 PTH1RQ03431 593 aa14.34□□□□□ -0.11
USP8-212ENST00000560730 FAM110CQ1W6H9 321 aa14.34□□□□□ -0.11
USP8-212ENST00000560730 IFFO2Q5TF58 517 aa14.34□□□□□ -0.11
USP8-212ENST00000560730 PPP4R2Q9NY27 417 aa14.34□□□□□ -0.11
USP8-212ENST00000560730 HPS5Q9UPZ3 1129 aa14.34□□□□□ -0.11
USP8-212ENST00000560730 PTPN22Q9Y2R2 807 aa14.34□□□□□ -0.11
USP8-212ENST00000560730 SGSM2O43147 1006 aa14.33□□□□□ -0.11
USP8-212ENST00000560730 RANBP6O60518 1105 aaKnown RBP14.33□□□□□ -0.11
USP8-212ENST00000560730 NMT2O60551 498 aa14.33□□□□□ -0.11
USP8-212ENST00000560730 FMNL1O95466 1100 aaPredicted RBP14.33□□□□□ -0.11
USP8-212ENST00000560730 Q3C1V9 767 aa14.33□□□□□ -0.11
USP8-212ENST00000560730 RRP12Q5JTH9 1297 aaKnown RBP14.33□□□□□ -0.11
USP8-212ENST00000560730 RUFY2Q8WXA3 655 aa14.33□□□□□ -0.11
USP8-212ENST00000560730 SH2D4AQ9H788 454 aa14.33□□□□□ -0.11
USP8-212ENST00000560730 IL17RBQ9NRM6 502 aa14.33□□□□□ -0.11
USP8-212ENST00000560730 MORF4L1Q9UBU8 362 aa14.33□□□□□ -0.11
USP8-212ENST00000560730 RAD50Q92878 1312 aa14.33□□□□□ -0.12
USP8-212ENST00000560730 TSPY2A6NKD2 308 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 SPDYE16A6NNV3 312 aaPredicted RBP14.32□□□□□ -0.12
USP8-212ENST00000560730 RAD21O60216 631 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 CNMDO75829 334 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 BMP2KLQ5H9B9 411 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 AKNAD1Q5T1N1 836 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 LPAR1Q92633 364 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 NUP88Q99567 741 aaPredicted RBP14.32□□□□□ -0.12
USP8-212ENST00000560730 PAGR1Q9BTK6 254 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 TANGO6Q9C0B7 1094 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 TOMM22Q9NS69 142 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 PTCH2Q9Y6C5 1203 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 COL11A1P12107 1806 aaPredicted RBP14.32□□□□□ -0.12
USP8-212ENST00000560730 NEDD4P46934 1319 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 CCDC85CA6NKD9 419 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 ZNF213O14771 459 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 FCGRTP55899 365 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 COG2Q14746 738 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 ARHGEF6Q15052 776 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 ERICH6BQ5W0A0 696 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 LRRC47Q8N1G4 583 aaKnown RBP14.32□□□□□ -0.12
USP8-212ENST00000560730 STAG1Q8WVM7 1258 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 MKL1Q969V6 931 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 GOPCQ9HD26 462 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 FBXO28Q9NVF7 368 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 BTBD7Q9P203 1132 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 SRRDQ9UH36 339 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 GABRQQ9UN88 632 aa14.32□□□□□ -0.12
USP8-212ENST00000560730 PLXNB2O15031 1838 aa14.31□□□□□ -0.12
USP8-212ENST00000560730 F5H6K3 240 aa14.31□□□□□ -0.12
USP8-212ENST00000560730 WDR46O15213 610 aaKnown RBP14.31□□□□□ -0.12
USP8-212ENST00000560730 TTLL1O95922 423 aa14.31□□□□□ -0.12
USP8-212ENST00000560730 NDUFB10O96000 172 aa14.31□□□□□ -0.12
USP8-212ENST00000560730 ERVK-9P63128 1117 aa14.31□□□□□ -0.12
USP8-212ENST00000560730 ERVK-24P63145 666 aa14.31□□□□□ -0.12
USP8-212ENST00000560730 KLRC3Q07444 240 aa14.31□□□□□ -0.12
USP8-212ENST00000560730 FAM83BQ5T0W9 1011 aa14.31□□□□□ -0.12
USP8-212ENST00000560730 SAMD1Q6SPF0 538 aaPredicted RBP14.31□□□□□ -0.12
USP8-212ENST00000560730 MFSD6Q6ZSS7 791 aa14.31□□□□□ -0.12
USP8-212ENST00000560730 GPRC5AQ8NFJ5 357 aa14.31□□□□□ -0.12
USP8-212ENST00000560730 CHMP4CQ96CF2 233 aa14.31□□□□□ -0.12
USP8-212ENST00000560730 RABGAP1Q9Y3P9 1069 aa14.31□□□□□ -0.12
USP8-212ENST00000560730 TNPO2O14787 897 aaKnown RBP14.3□□□□□ -0.12
USP8-212ENST00000560730 FLOT1O75955 427 aa14.3□□□□□ -0.12
USP8-212ENST00000560730 GNRH1P01148 92 aa14.3□□□□□ -0.12
USP8-212ENST00000560730 DSG3P32926 999 aa14.3□□□□□ -0.12
USP8-212ENST00000560730 PRKCZQ05513 592 aa14.3□□□□□ -0.12
USP8-212ENST00000560730 LBX2Q6XYB7 198 aa14.3□□□□□ -0.12
USP8-212ENST00000560730 ATG4CQ96DT6 458 aa14.3□□□□□ -0.12
USP8-212ENST00000560730 PORCNQ9H237 461 aa14.3□□□□□ -0.12
USP8-212ENST00000560730 HOXC10Q9NYD6 342 aa14.3□□□□□ -0.12
USP8-212ENST00000560730 CTNNA3Q9UI47 895 aa14.3□□□□□ -0.12
USP8-212ENST00000560730 KIAA0100Q14667 2235 aaKnown RBP14.29□□□□□ -0.12
USP8-212ENST00000560730 MYPNQ86TC9 1320 aa14.29□□□□□ -0.12
USP8-212ENST00000560730 A0A0G2JMZ2 1700 aa14.29□□□□□ -0.12
USP8-212ENST00000560730 HOXD10P28358 340 aa14.29□□□□□ -0.12
USP8-212ENST00000560730 NOVP48745 357 aa14.29□□□□□ -0.12
USP8-212ENST00000560730 IMMTQ16891 758 aaKnown RBP14.29□□□□□ -0.12
USP8-212ENST00000560730 RASGRP2Q7LDG7 609 aa14.29□□□□□ -0.12
USP8-212ENST00000560730 GTF3C2Q8WUA4 911 aaPredicted RBP14.29□□□□□ -0.12
USP8-212ENST00000560730 ESYT1Q9BSJ8 1104 aa14.29□□□□□ -0.12
USP8-212ENST00000560730 RNF41Q9H4P4 317 aaPredicted RBP14.29□□□□□ -0.12
USP8-212ENST00000560730 STX8Q9UNK0 236 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms