RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 COLQQ9Y215 455 aaPredicted RBP17.04■□□□□ 0.32
SNX6-210ENST00000557341 USP17L12C9JPN9 530 aa17.03■□□□□ 0.32
SNX6-210ENST00000557341 USP17L21D6R901 530 aa17.03■□□□□ 0.32
SNX6-210ENST00000557341 AKR1B1P15121 316 aa17.03■□□□□ 0.32
SNX6-210ENST00000557341 WDR78Q5VTH9 848 aa17.03■□□□□ 0.32
SNX6-210ENST00000557341 C16orf86Q6ZW13 317 aa17.03■□□□□ 0.32
SNX6-210ENST00000557341 KBTBD3Q8NAB2 608 aa17.03■□□□□ 0.32
SNX6-210ENST00000557341 LPAR1Q92633 364 aa17.03■□□□□ 0.32
SNX6-210ENST00000557341 CCDC17Q96LX7 622 aa17.03■□□□□ 0.32
SNX6-210ENST00000557341 NR2E3Q9Y5X4 410 aa17.03■□□□□ 0.32
SNX6-210ENST00000557341 IVNS1ABPQ9Y6Y0 642 aa17.03■□□□□ 0.32
SNX6-210ENST00000557341 DNAH12Q6ZR08 3092 aa17.03■□□□□ 0.32
SNX6-210ENST00000557341 CYP2D7A0A087X1C5 515 aa17.02■□□□□ 0.32
SNX6-210ENST00000557341 CDK8P49336 464 aa17.02■□□□□ 0.32
SNX6-210ENST00000557341 MAP2K5Q13163 448 aa17.02■□□□□ 0.32
SNX6-210ENST00000557341 NECAB2Q7Z6G3 386 aa17.02■□□□□ 0.32
SNX6-210ENST00000557341 CLEC10AQ8IUN9 316 aa17.02■□□□□ 0.32
SNX6-210ENST00000557341 PAWRQ96IZ0 340 aaKnown RBP17.02■□□□□ 0.32
SNX6-210ENST00000557341 BTBD7Q9P203 1132 aa17.02■□□□□ 0.32
SNX6-210ENST00000557341 PCDH10Q9P2E7 1040 aa17.02■□□□□ 0.32
SNX6-210ENST00000557341 COG2Q14746 738 aa17.01■□□□□ 0.31
SNX6-210ENST00000557341 CCL14Q16627 93 aa17.01■□□□□ 0.31
SNX6-210ENST00000557341 TSHZ3Q63HK5 1081 aa17.01■□□□□ 0.31
SNX6-210ENST00000557341 CHRDL2Q6WN34 429 aa17.01■□□□□ 0.31
SNX6-210ENST00000557341 DIS3LQ8TF46 1054 aaKnown RBP17.01■□□□□ 0.31
SNX6-210ENST00000557341 APPBP2Q92624 585 aa17.01■□□□□ 0.31
SNX6-210ENST00000557341 TMX2Q9Y320 296 aa17.01■□□□□ 0.31
SNX6-210ENST00000557341 ROBO3Q96MS0 1386 aa17.01■□□□□ 0.31
SNX6-210ENST00000557341 TTC41PQ6P2S7 1318 aa17■□□□□ 0.31
SNX6-210ENST00000557341 SLC15A5A6NIM6 579 aa17■□□□□ 0.31
SNX6-210ENST00000557341 SMIM22K7EJ46 135 aa17■□□□□ 0.31
SNX6-210ENST00000557341 EVI5O60447 810 aa17■□□□□ 0.31
SNX6-210ENST00000557341 ZFYP08048 801 aaPredicted RBP17■□□□□ 0.31
SNX6-210ENST00000557341 PTPREP23469 700 aa17■□□□□ 0.31
SNX6-210ENST00000557341 CACNB2Q08289 660 aaPredicted RBP17■□□□□ 0.31
SNX6-210ENST00000557341 GRB14Q14449 540 aa17■□□□□ 0.31
SNX6-210ENST00000557341 CTR9Q6PD62 1173 aa17■□□□□ 0.31
SNX6-210ENST00000557341 VCPKMTQ9H867 229 aa17■□□□□ 0.31
SNX6-210ENST00000557341 HOXC10Q9NYD6 342 aa17■□□□□ 0.31
SNX6-210ENST00000557341 OGDHLQ9ULD0 1010 aa17■□□□□ 0.31
SNX6-210ENST00000557341 WDR46O15213 610 aaKnown RBP16.99■□□□□ 0.31
SNX6-210ENST00000557341 FXR1P51114 621 aaKnown RBP eCLIP16.99■□□□□ 0.31
SNX6-210ENST00000557341 RRP1P56182 461 aaKnown RBP16.99■□□□□ 0.31
SNX6-210ENST00000557341 LRRFIP1Q32MZ4 808 aaKnown RBP16.99■□□□□ 0.31
SNX6-210ENST00000557341 KIAA1755Q5JYT7 1200 aa16.99■□□□□ 0.31
SNX6-210ENST00000557341 SPICE1Q8N0Z3 855 aa16.99■□□□□ 0.31
SNX6-210ENST00000557341 MB21D1Q8N884 522 aa16.99■□□□□ 0.31
SNX6-210ENST00000557341 STRBPQ96SI9 672 aaKnown RBP16.99■□□□□ 0.31
SNX6-210ENST00000557341 NBPF3Q9H094 633 aa16.99■□□□□ 0.31
SNX6-210ENST00000557341 SZT2Q5T011 3432 aa16.99■□□□□ 0.31
SNX6-210ENST00000557341 ERC2O15083 957 aa16.98■□□□□ 0.31
SNX6-210ENST00000557341 RNF113AO15541 343 aaKnown RBP16.98■□□□□ 0.31
SNX6-210ENST00000557341 FLOT1O75955 427 aa16.98■□□□□ 0.31
SNX6-210ENST00000557341 HOXC6P09630 235 aa16.98■□□□□ 0.31
SNX6-210ENST00000557341 SBK1Q52WX2 424 aa16.98■□□□□ 0.31
SNX6-210ENST00000557341 GIMAP6Q6P9H5 292 aa16.98■□□□□ 0.31
SNX6-210ENST00000557341 SIAH1Q8IUQ4 282 aa16.98■□□□□ 0.31
SNX6-210ENST00000557341 OSBP2Q969R2 916 aa16.98■□□□□ 0.31
SNX6-210ENST00000557341 MOV10L1Q9BXT6 1211 aaKnown RBP16.98■□□□□ 0.31
SNX6-210ENST00000557341 SPATC1LQ9H0A9 340 aa16.98■□□□□ 0.31
SNX6-210ENST00000557341 KANSL2Q9H9L4 492 aa16.98■□□□□ 0.31
SNX6-210ENST00000557341 PCDHB15Q9Y5E8 787 aa16.98■□□□□ 0.31
SNX6-210ENST00000557341 GSG1L2A8MUP6 293 aa16.97■□□□□ 0.31
SNX6-210ENST00000557341 GPAA1O43292 621 aa16.97■□□□□ 0.31
SNX6-210ENST00000557341 EEF2P13639 858 aaKnown RBP16.97■□□□□ 0.31
SNX6-210ENST00000557341 GNAT2P19087 354 aa16.97■□□□□ 0.31
SNX6-210ENST00000557341 CCND3P30281 292 aaPredicted RBP16.97■□□□□ 0.31
SNX6-210ENST00000557341 DSG3P32926 999 aa16.97■□□□□ 0.31
SNX6-210ENST00000557341 ATP2B2Q01814 1243 aa16.97■□□□□ 0.31
SNX6-210ENST00000557341 MFSD14CQ5VZR4 134 aa16.97■□□□□ 0.31
SNX6-210ENST00000557341 SHCBP1Q8NEM2 672 aa16.97■□□□□ 0.31
SNX6-210ENST00000557341 C11orf49Q9H6J7 331 aa16.97■□□□□ 0.31
SNX6-210ENST00000557341 GOPCQ9HD26 462 aa16.97■□□□□ 0.31
SNX6-210ENST00000557341 MNX1P50219 401 aaPredicted RBP16.96■□□□□ 0.31
SNX6-210ENST00000557341 ATG4CQ96DT6 458 aa16.96■□□□□ 0.31
SNX6-210ENST00000557341 FLRT1Q9NZU1 646 aa16.96■□□□□ 0.31
SNX6-210ENST00000557341 RBM27Q9P2N5 1060 aaKnown RBP16.96■□□□□ 0.31
SNX6-210ENST00000557341 MINDY4BA8MYZ0 360 aa16.95■□□□□ 0.3
SNX6-210ENST00000557341 M0R2C6 588 aa16.95■□□□□ 0.3
SNX6-210ENST00000557341 STRNO43815 780 aa16.95■□□□□ 0.3
SNX6-210ENST00000557341 ERCC3P19447 782 aa16.95■□□□□ 0.3
SNX6-210ENST00000557341 ADORA2AP29274 412 aa16.95■□□□□ 0.3
SNX6-210ENST00000557341 TDO2P48775 406 aa16.95■□□□□ 0.3
SNX6-210ENST00000557341 PLS1Q14651 629 aa16.95■□□□□ 0.3
SNX6-210ENST00000557341 SAMD1Q6SPF0 538 aaPredicted RBP16.95■□□□□ 0.3
SNX6-210ENST00000557341 NPLOC4Q8TAT6 608 aa16.95■□□□□ 0.3
SNX6-210ENST00000557341 PI4K2BQ8TCG2 481 aa16.95■□□□□ 0.3
SNX6-210ENST00000557341 MROH8Q9H579 483 aa16.95■□□□□ 0.3
SNX6-210ENST00000557341 MKNK2Q9HBH9 465 aa16.95■□□□□ 0.3
SNX6-210ENST00000557341 EPB41L4AQ9HCS5 686 aaPredicted RBP16.95■□□□□ 0.3
SNX6-210ENST00000557341 LAMA3Q16787 3333 aa16.95■□□□□ 0.3
SNX6-210ENST00000557341 RAD21O60216 631 aa16.94■□□□□ 0.3
SNX6-210ENST00000557341 MSCO60682 206 aa16.94■□□□□ 0.3
SNX6-210ENST00000557341 MX1P20591 662 aa16.94■□□□□ 0.3
SNX6-210ENST00000557341 RASA1P20936 1047 aa16.94■□□□□ 0.3
SNX6-210ENST00000557341 LHX8Q68G74 356 aa16.94■□□□□ 0.3
SNX6-210ENST00000557341 DPP9Q86TI2 863 aa16.94■□□□□ 0.3
SNX6-210ENST00000557341 NCAPG2Q86XI2 1143 aa16.94■□□□□ 0.3
SNX6-210ENST00000557341 C7orf61Q8IZ16 206 aa16.94■□□□□ 0.3
SNX6-210ENST00000557341 FSD1Q9BTV5 496 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms