RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 IDH1O75874 414 aaKnown RBP8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 GH2P01242 217 aa8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 CYP2D6P10635 497 aa8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 HERVK_113P62684 666 aa8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 GSTO1P78417 241 aa8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 MTX1Q13505 466 aa8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 FAM110CQ1W6H9 321 aa8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 WDR78Q5VTH9 848 aa8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 ANO1Q5XXA6 986 aa8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 ATF7IPQ6VMQ6 1270 aa8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 PACS2Q86VP3 889 aa8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 CLEC10AQ8IUN9 316 aa8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 SLF2Q8IX21 1173 aa8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 CRACR2BQ8N4Y2 399 aaPredicted RBP8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 NKX2-3Q8TAU0 364 aa8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 PANK1Q8TE04 598 aa8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 EAF2Q96CJ1 260 aaPredicted RBP8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 EDC3Q96F86 508 aaKnown RBP8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 HTATIP2Q9BUP3 242 aa8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 FLRT1Q9NZU1 646 aa8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 DBNLQ9UJU6 430 aaKnown RBP8.39□□□□□ -1.07
PRPF40B-214ENST00000551320 PFASO15067 1338 aa8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 CNMDO75829 334 aa8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 LDHCP07864 332 aa8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 BACE1P56817 501 aa8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 IRX3P78415 501 aaPredicted RBP8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 MDM2Q00987 491 aaPredicted RBP8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 CACNB2Q08289 660 aaPredicted RBP8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 IRF5Q13568 498 aa8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 NUDT18Q6ZVK8 323 aa8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 ITPRIPQ8IWB1 547 aa8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 MAGEB6Q8N7X4 407 aa8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 PROCA1Q8NCQ7 364 aaPredicted RBP8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 REPIN1Q9BWE0 567 aaKnown RBP8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 IL1RAPL2Q9NP60 686 aa8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 ZBTB21Q9ULJ3 1066 aa8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 EXOC6BQ9Y2D4 811 aa8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 SLC45A1Q9Y2W3 748 aa8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 NR2E3Q9Y5X4 410 aa8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 CDK5RAP2Q96SN8 1893 aa8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 PRUNE2Q8WUY3 3088 aa8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 LOC285556D6RIA3 1793 aa8.38□□□□□ -1.07
PRPF40B-214ENST00000551320 PDS5AQ29RF7 1337 aaKnown RBP8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 CYP2D7A0A087X1C5 515 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 HMGCRP04035 888 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 MAGEA10P43363 369 aaPredicted RBP8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 PLCD1P51178 756 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 ATP8B2P98198 1209 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 RAB3GAP1Q15042 981 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 LRRC26Q2I0M4 334 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 SH3D19Q5HYK7 790 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 KIAA1755Q5JYT7 1200 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 NECAB2Q7Z6G3 386 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 SLC44A5Q8NCS7 719 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 SLC17A8Q8NDX2 589 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 TATDN2Q93075 761 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 FAM161BQ96MY7 647 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 NOL10Q9BSC4 688 aaKnown RBP8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 HMX1Q9NP08 348 aaPredicted RBP8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 TMOD4Q9NZQ9 345 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 BTBD7Q9P203 1132 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 KIAA1468Q9P260 1216 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 PI4KBQ9UBF8 816 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 PNMA3Q9UL41 463 aa8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 DDX60LQ5H9U9 1706 aaKnown RBP8.37□□□□□ -1.07
PRPF40B-214ENST00000551320 RBAK-RBAKDNI3L0D1 243 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 SMAPO00193 183 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 PRKAB2O43741 272 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 UQCRFS1P1P0C7P4 283 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 CYP2C19P33261 490 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 GUCY1A2P33402 732 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 CLCN1P35523 988 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 USP5P45974 858 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 ERVK-9P63128 1117 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 ERVK-24P63145 666 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 TMEM132AQ24JP5 1023 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 CCDC158Q5M9N0 1113 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 PRAMEF19Q5SWL8 479 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 GPR142Q7Z601 462 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 TRPV1Q8NER1 839 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 GPRC5AQ8NFJ5 357 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 SSH3Q8TE77 659 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 ARHGAP45Q92619 1136 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 DYNLL2Q96FJ2 89 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 WDR18Q9BV38 432 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 TRIM34Q9BYJ4 488 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 GPCPD1Q9NPB8 672 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 MORF4L1Q9UBU8 362 aa8.36□□□□□ -1.07
PRPF40B-214ENST00000551320 RPTORQ8N122 1335 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 USP17L10C9JJH3 530 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 DLL1O00548 723 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 IPO8O15397 1037 aaKnown RBP8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 BAG3O95817 575 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 CT47B1P0C2W7 299 aaPredicted RBP8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 CNGA1P29973 690 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 GCLCP48506 637 aaPredicted RBP8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 PPP4CP60510 307 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 HNRNPUQ00839 825 aaKnown RBP eCLIP8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 SEPT2Q15019 361 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 ZKSCAN2Q63HK3 967 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms