RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 NEDD9Q14511 834 aa14.32□□□□□ -0.12
DDX55-206ENST00000539934 INF2Q27J81 1249 aa14.32□□□□□ -0.12
DDX55-206ENST00000539934 AMOTL1Q8IY63 956 aa14.32□□□□□ -0.12
DDX55-206ENST00000539934 MYOCDQ8IZQ8 938 aa14.32□□□□□ -0.12
DDX55-206ENST00000539934 SNED1Q8TER0 1413 aa14.32□□□□□ -0.12
DDX55-206ENST00000539934 RPGRQ92834 1020 aaKnown RBP14.32□□□□□ -0.12
DDX55-206ENST00000539934 PUS3Q9BZE2 481 aaKnown RBP14.32□□□□□ -0.12
DDX55-206ENST00000539934 PALD1Q9ULE6 856 aa14.32□□□□□ -0.12
DDX55-206ENST00000539934 PPIP5K2O43314 1243 aa14.31□□□□□ -0.12
DDX55-206ENST00000539934 DEUP1Q05D60 604 aa14.31□□□□□ -0.12
DDX55-206ENST00000539934 SLFNL1Q499Z3 407 aa14.31□□□□□ -0.12
DDX55-206ENST00000539934 CCDC70Q6NSX1 233 aa14.31□□□□□ -0.12
DDX55-206ENST00000539934 OTUD6AQ7L8S5 288 aa14.31□□□□□ -0.12
DDX55-206ENST00000539934 TTC30BQ8N4P2 665 aa14.31□□□□□ -0.12
DDX55-206ENST00000539934 NEK9Q8TD19 979 aa14.31□□□□□ -0.12
DDX55-206ENST00000539934 TAF4BQ92750 862 aa14.31□□□□□ -0.12
DDX55-206ENST00000539934 CCDC102AQ96A19 550 aa14.31□□□□□ -0.12
DDX55-206ENST00000539934 GBP4Q96PP9 640 aa14.31□□□□□ -0.12
DDX55-206ENST00000539934 TMEM98Q9Y2Y6 226 aa14.31□□□□□ -0.12
DDX55-206ENST00000539934 ZNF609O15014 1411 aa14.31□□□□□ -0.12
DDX55-206ENST00000539934 TPP2P29144 1249 aaPredicted RBP14.31□□□□□ -0.12
DDX55-206ENST00000539934 CTSWP56202 376 aa14.31□□□□□ -0.12
DDX55-206ENST00000539934 SFMBT2Q5VUG0 894 aa14.31□□□□□ -0.12
DDX55-206ENST00000539934 TTLL11Q8NHH1 800 aa14.31□□□□□ -0.12
DDX55-206ENST00000539934 LSG1Q9H089 658 aaKnown RBP14.31□□□□□ -0.12
DDX55-206ENST00000539934 FOXD4L1Q9NU39 408 aa14.31□□□□□ -0.12
DDX55-206ENST00000539934 BIN2Q9UBW5 565 aaPredicted RBP14.31□□□□□ -0.12
DDX55-206ENST00000539934 NRBP1Q9UHY1 535 aa14.31□□□□□ -0.12
DDX55-206ENST00000539934 PDE8AO60658 829 aa14.3□□□□□ -0.12
DDX55-206ENST00000539934 IVLP07476 585 aa14.3□□□□□ -0.12
DDX55-206ENST00000539934 HSPA4P34932 840 aa14.3□□□□□ -0.12
DDX55-206ENST00000539934 NEK4P51957 841 aa14.3□□□□□ -0.12
DDX55-206ENST00000539934 TIMM10P62072 90 aa14.3□□□□□ -0.12
DDX55-206ENST00000539934 NIM1KQ8IY84 436 aa14.3□□□□□ -0.12
DDX55-206ENST00000539934 TBC1D5Q92609 795 aa14.3□□□□□ -0.12
DDX55-206ENST00000539934 COMMD10Q9Y6G5 202 aa14.3□□□□□ -0.12
DDX55-206ENST00000539934 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.3□□□□□ -0.12
DDX55-206ENST00000539934 TRPM7Q96QT4 1865 aa14.3□□□□□ -0.12
DDX55-206ENST00000539934 ITGA6P23229 1130 aa14.3□□□□□ -0.12
DDX55-206ENST00000539934 CCNHP51946 323 aaPredicted RBP14.3□□□□□ -0.12
DDX55-206ENST00000539934 NMIQ13287 307 aaPredicted RBP14.3□□□□□ -0.12
DDX55-206ENST00000539934 PKN1Q16512 942 aa14.3□□□□□ -0.12
DDX55-206ENST00000539934 CRY2Q49AN0 593 aa14.3□□□□□ -0.12
DDX55-206ENST00000539934 CLEC17AQ6ZS10 378 aa14.3□□□□□ -0.12
DDX55-206ENST00000539934 USP50Q70EL3 339 aaPredicted RBP14.3□□□□□ -0.12
DDX55-206ENST00000539934 GREM2Q9H772 168 aa14.3□□□□□ -0.12
DDX55-206ENST00000539934 GPRC5DQ9NZD1 345 aa14.3□□□□□ -0.12
DDX55-206ENST00000539934 RAD17O75943 681 aa14.29□□□□□ -0.12
DDX55-206ENST00000539934 GMPSP49915 693 aaPredicted RBP14.29□□□□□ -0.12
DDX55-206ENST00000539934 CXCL9Q07325 125 aa14.29□□□□□ -0.12
DDX55-206ENST00000539934 SYNE3Q6ZMZ3 975 aa14.29□□□□□ -0.12
DDX55-206ENST00000539934 HDAC7Q8WUI4 952 aa14.29□□□□□ -0.12
DDX55-206ENST00000539934 EDC3Q96F86 508 aaKnown RBP14.29□□□□□ -0.12
DDX55-206ENST00000539934 ZSCAN16Q9H4T2 348 aaPredicted RBP14.29□□□□□ -0.12
DDX55-206ENST00000539934 SPATA7Q9P0W8 599 aa14.29□□□□□ -0.12
DDX55-206ENST00000539934 SH3TC1Q8TE82 1336 aa14.29□□□□□ -0.12
DDX55-206ENST00000539934 PPEF1O14829 653 aaPredicted RBP14.29□□□□□ -0.12
DDX55-206ENST00000539934 HIRAP54198 1017 aaPredicted RBP14.29□□□□□ -0.12
DDX55-206ENST00000539934 ZRSR1Q15695 479 aaKnown RBP14.29□□□□□ -0.12
DDX55-206ENST00000539934 DBN1Q16643 649 aa14.29□□□□□ -0.12
DDX55-206ENST00000539934 PARP10Q53GL7 1025 aa14.29□□□□□ -0.12
DDX55-206ENST00000539934 SUSD4Q5VX71 490 aa14.29□□□□□ -0.12
DDX55-206ENST00000539934 CCDC73Q6ZRK6 1079 aa14.29□□□□□ -0.12
DDX55-206ENST00000539934 TRPM4Q8TD43 1214 aa14.29□□□□□ -0.12
DDX55-206ENST00000539934 FAM227BQ96M60 508 aa14.29□□□□□ -0.12
DDX55-206ENST00000539934 HAUS7Q99871 368 aa14.29□□□□□ -0.12
DDX55-206ENST00000539934 CFAP69A5D8W1 941 aa14.28□□□□□ -0.12
DDX55-206ENST00000539934 RTN2O75298 545 aa14.28□□□□□ -0.12
DDX55-206ENST00000539934 MYL1P05976 194 aa14.28□□□□□ -0.12
DDX55-206ENST00000539934 RAB27AP51159 221 aa14.28□□□□□ -0.12
DDX55-206ENST00000539934 TPM4P67936 248 aa14.28□□□□□ -0.12
DDX55-206ENST00000539934 LDHAL6AQ6ZMR3 332 aa14.28□□□□□ -0.12
DDX55-206ENST00000539934 SPATA21Q7Z572 469 aa14.28□□□□□ -0.12
DDX55-206ENST00000539934 NEK11Q8NG66 645 aa14.28□□□□□ -0.12
DDX55-206ENST00000539934 UTP14AQ9BVJ6 771 aaKnown RBP14.28□□□□□ -0.12
DDX55-206ENST00000539934 ADARB2Q9NS39 739 aaKnown RBP14.28□□□□□ -0.12
DDX55-206ENST00000539934 PSD3Q9NYI0 1048 aa14.28□□□□□ -0.12
DDX55-206ENST00000539934 NDUFB9Q9Y6M9 179 aa14.28□□□□□ -0.12
DDX55-206ENST00000539934 SZT2Q5T011 3432 aa14.28□□□□□ -0.12
DDX55-206ENST00000539934 PYGLP06737 847 aa14.27□□□□□ -0.12
DDX55-206ENST00000539934 HOXA10P31260 410 aaPredicted RBP14.27□□□□□ -0.12
DDX55-206ENST00000539934 CORO7P57737 925 aa14.27□□□□□ -0.12
DDX55-206ENST00000539934 KLHL40Q2TBA0 621 aa14.27□□□□□ -0.12
DDX55-206ENST00000539934 GBP6Q6ZN66 633 aa14.27□□□□□ -0.12
DDX55-206ENST00000539934 ANKRD18AQ8IVF6 992 aa14.27□□□□□ -0.12
DDX55-206ENST00000539934 DHRS1Q96LJ7 313 aa14.27□□□□□ -0.12
DDX55-206ENST00000539934 SEZ6LQ9BYH1 1024 aa14.27□□□□□ -0.12
DDX55-206ENST00000539934 CNNM1Q9NRU3 951 aa14.27□□□□□ -0.12
DDX55-206ENST00000539934 USP25Q9UHP3 1055 aa14.27□□□□□ -0.12
DDX55-206ENST00000539934 BARX2Q9UMQ3 279 aaPredicted RBP14.27□□□□□ -0.12
DDX55-206ENST00000539934 ITM2BQ9Y287 266 aa14.27□□□□□ -0.12
DDX55-206ENST00000539934 THSD7BQ9C0I4 1608 aa14.27□□□□□ -0.12
DDX55-206ENST00000539934 A0A0D9SFI3 127 aa14.27□□□□□ -0.13
DDX55-206ENST00000539934 KRT38O76015 456 aa14.27□□□□□ -0.13
DDX55-206ENST00000539934 PYGBP11216 843 aa14.27□□□□□ -0.13
DDX55-206ENST00000539934 ABL2P42684 1182 aa14.27□□□□□ -0.13
DDX55-206ENST00000539934 METTL24Q5JXM2 366 aa14.27□□□□□ -0.13
DDX55-206ENST00000539934 LARP1BQ659C4 914 aaKnown RBP14.27□□□□□ -0.13
DDX55-206ENST00000539934 RBM17Q96I25 401 aaKnown RBP14.27□□□□□ -0.13
DDX55-206ENST00000539934 CIZ1Q9ULV3 898 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms