RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 GTF3C2Q8WUA4 911 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-204ENST00000537068 TGFBRAP1Q8WUH2 860 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 LRCH3Q96II8 777 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 NUDT12Q9BQG2 462 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 DBNDD2Q9BQY9 259 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 C11orf49Q9H6J7 331 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 PALD1Q9ULE6 856 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 PFASO15067 1338 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 LTBP2Q14767 1821 aa6.43□□□□□ -1.38
SNHG1-204ENST00000537068 COL6A3P12111 3177 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 COL11A1P12107 1806 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-204ENST00000537068 PEX10O60683 326 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 CNMDO75829 334 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 CYP2B6P20813 491 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 ZAP70P43403 619 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 ERVK-9P63128 1117 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 ERVK-24P63145 666 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 IRX3P78415 501 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-204ENST00000537068 SHROOM1Q2M3G4 852 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-204ENST00000537068 USP17L2Q6R6M4 530 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 CATSPERGQ6ZRH7 1159 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 GPR142Q7Z601 462 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 CERS3Q8IU89 383 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 SPNS2Q8IVW8 549 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 TMEM57Q8N5G2 664 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 SOCS4Q8WXH5 440 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 KHSRPQ92945 711 aaKnown RBP eCLIP6.42□□□□□ -1.382e-12■■■□□ 16.9
SNHG1-204ENST00000537068 EAF2Q96CJ1 260 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-204ENST00000537068 NOL10Q9BSC4 688 aaKnown RBP6.42□□□□□ -1.38
SNHG1-204ENST00000537068 EHD4Q9H223 541 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 PORCNQ9H237 461 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 NPDC1Q9NQX5 325 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-204ENST00000537068 SNRKQ9NRH2 765 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 TMOD4Q9NZQ9 345 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 DBNLQ9UJU6 430 aaKnown RBP6.42□□□□□ -1.38
SNHG1-204ENST00000537068 ZBTB21Q9ULJ3 1066 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 RABGAP1Q9Y3P9 1069 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 NAV1Q8NEY1 1877 aa6.42□□□□□ -1.38
SNHG1-204ENST00000537068 MYH7P12883 1935 aa6.41□□□□□ -1.38
SNHG1-204ENST00000537068 LAMA3Q16787 3333 aa6.41□□□□□ -1.38
SNHG1-204ENST00000537068 SURF6O75683 361 aaKnown RBP6.41□□□□□ -1.38
SNHG1-204ENST00000537068 GDF11O95390 407 aa6.41□□□□□ -1.38
SNHG1-204ENST00000537068 HOXC6P09630 235 aa6.41□□□□□ -1.38
SNHG1-204ENST00000537068 HOXB3P14651 431 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-204ENST00000537068 MAGEA10P43363 369 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-204ENST00000537068 DYNLL1P63167 89 aaKnown RBP6.41□□□□□ -1.38
SNHG1-204ENST00000537068 GABPAQ06546 454 aa6.41□□□□□ -1.38
SNHG1-204ENST00000537068 CCL14Q16627 93 aa6.41□□□□□ -1.38
SNHG1-204ENST00000537068 TTC39AQ5SRH9 613 aa6.41□□□□□ -1.38
SNHG1-204ENST00000537068 ZKSCAN2Q63HK3 967 aa6.41□□□□□ -1.38
SNHG1-204ENST00000537068 PLEKHH3Q7Z736 793 aa6.41□□□□□ -1.38
SNHG1-204ENST00000537068 MAPKAPK5Q8IW41 473 aa6.41□□□□□ -1.38
SNHG1-204ENST00000537068 TDHQ8IZJ6 230 aa6.41□□□□□ -1.38
SNHG1-204ENST00000537068 MARVELD3Q96A59 401 aa6.41□□□□□ -1.38
SNHG1-204ENST00000537068 CLUAP1Q96AJ1 413 aa6.41□□□□□ -1.38
SNHG1-204ENST00000537068 EPAS1Q99814 870 aa6.41□□□□□ -1.38
SNHG1-204ENST00000537068 KIAA1683Q9H0B3 1180 aa6.41□□□□□ -1.38
SNHG1-204ENST00000537068 PIH1D3Q9NQM4 214 aaKnown RBP6.41□□□□□ -1.38
SNHG1-204ENST00000537068 SMCHD1A6NHR9 2005 aa6.41□□□□□ -1.38
SNHG1-204ENST00000537068 PLXNA1Q9UIW2 1896 aa6.41□□□□□ -1.38
SNHG1-204ENST00000537068 BAZ2AQ9UIF9 1905 aaKnown RBP6.4□□□□□ -1.38
SNHG1-204ENST00000537068 SLC15A5A6NIM6 579 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 USP17L15C9J2P7 530 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 USP17L13C9JLJ4 530 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 USP17L11C9JVI0 530 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 USP17L18D6R9N7 530 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 USP17L22D6RA61 530 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 USP17L17D6RBQ6 530 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 USP17L19D6RCP7 530 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 USP17L20D6RJB6 530 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 GH2P01242 217 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 HLA-DOAP06340 250 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 CYP7A1P22680 504 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 PTPREP23469 700 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 CCND3P30281 292 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-204ENST00000537068 GUCY1A2P33402 732 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 RGS2P41220 211 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 USP17L24Q0WX57 530 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 MMRN1Q13201 1228 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 C7orf61Q8IZ16 206 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 CRACR2BQ8N4Y2 399 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-204ENST00000537068 SLC17A8Q8NDX2 589 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 FRAT1Q92837 279 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-204ENST00000537068 EDC3Q96F86 508 aaKnown RBP6.4□□□□□ -1.38
SNHG1-204ENST00000537068 APBA2Q99767 749 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 RIOK1Q9BRS2 568 aaKnown RBP6.4□□□□□ -1.38
SNHG1-204ENST00000537068 MTMR10Q9NXD2 777 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 TLR7Q9NYK1 1049 aaKnown RBP6.4□□□□□ -1.38
SNHG1-204ENST00000537068 FLRT1Q9NZU1 646 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 BTBD7Q9P203 1132 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 SERPINB13Q9UIV8 391 aa6.4□□□□□ -1.38
SNHG1-204ENST00000537068 ZMYND8Q9ULU4 1186 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-204ENST00000537068 GREB1LQ9C091 1923 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-204ENST00000537068 POTEB3A0JP26 581 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 DLL1O00548 723 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 STRNO43815 780 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 NUDT7P0C024 238 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 RLBP1P12271 317 aa6.39□□□□□ -1.39
SNHG1-204ENST00000537068 ZKSCAN1P17029 563 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-204ENST00000537068 SYN1P17600 705 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 483 ms