RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 CHD9Q3L8U1 2897 aa13.69□□□□□ -0.22
CTNNA1-234ENST00000522227 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
CTNNA1-234ENST00000522227 GH2P01242 217 aa13.69□□□□□ -0.22
CTNNA1-234ENST00000522227 RFX5P48382 616 aaPredicted RBP13.69□□□□□ -0.22
CTNNA1-234ENST00000522227 TBC1D9Q6ZT07 1266 aa13.69□□□□□ -0.22
CTNNA1-234ENST00000522227 MAPKAPK5Q8IW41 473 aa13.69□□□□□ -0.22
CTNNA1-234ENST00000522227 TMEM199Q8N511 208 aa13.69□□□□□ -0.22
CTNNA1-234ENST00000522227 VTI1AQ96AJ9 217 aa13.69□□□□□ -0.22
CTNNA1-234ENST00000522227 MOV10L1Q9BXT6 1211 aaKnown RBP13.69□□□□□ -0.22
CTNNA1-234ENST00000522227 RAI14Q9P0K7 980 aa13.69□□□□□ -0.22
CTNNA1-234ENST00000522227 SAP30BPQ9UHR5 308 aaKnown RBP13.69□□□□□ -0.22
CTNNA1-234ENST00000522227 SMCHD1A6NHR9 2005 aa13.69□□□□□ -0.22
CTNNA1-234ENST00000522227 REV3LO60673 3130 aa13.68□□□□□ -0.22
CTNNA1-234ENST00000522227 SPDYE16A6NNV3 312 aaPredicted RBP13.68□□□□□ -0.22
CTNNA1-234ENST00000522227 PI4K2BG5E9Z4 385 aa13.68□□□□□ -0.22
CTNNA1-234ENST00000522227 GTPBP6O43824 516 aaPredicted RBP13.68□□□□□ -0.22
CTNNA1-234ENST00000522227 LDHCP07864 332 aa13.68□□□□□ -0.22
CTNNA1-234ENST00000522227 TAL1P17542 331 aaPredicted RBP13.68□□□□□ -0.22
CTNNA1-234ENST00000522227 PLS1Q14651 629 aa13.68□□□□□ -0.22
CTNNA1-234ENST00000522227 PSRC1Q6PGN9 363 aaPredicted RBP13.68□□□□□ -0.22
CTNNA1-234ENST00000522227 SAMD1Q6SPF0 538 aaPredicted RBP13.68□□□□□ -0.22
CTNNA1-234ENST00000522227 OTOP2Q7RTS6 562 aa13.68□□□□□ -0.22
CTNNA1-234ENST00000522227 ANKRD33Q7Z3H0 272 aa13.68□□□□□ -0.22
CTNNA1-234ENST00000522227 TBX21Q9UL17 535 aa13.68□□□□□ -0.22
CTNNA1-234ENST00000522227 PALD1Q9ULE6 856 aa13.68□□□□□ -0.22
CTNNA1-234ENST00000522227 SIPA1L1O43166 1804 aa13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 VCAM1P19320 739 aa13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 ERCC3P19447 782 aa13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 CYP2C18P33260 490 aa13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 ACLYP53396 1101 aa13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 TIMM10P62072 90 aa13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 DDX10Q13206 875 aaKnown RBP13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 RAB3GAP1Q15042 981 aa13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 PI16Q6UXB8 463 aa13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 NCAPG2Q86XI2 1143 aa13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 TGFBRAP1Q8WUH2 860 aa13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 CDCA7LQ96GN5 454 aa13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 MAML3Q96JK9 1138 aa13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 FBXL18Q96ME1 805 aa13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 TOX2Q96NM4 488 aa13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 RPAP3Q9H6T3 665 aaPredicted RBP13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 SLC5A4Q9NY91 659 aa13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 MTCH2Q9Y6C9 303 aa13.67□□□□□ -0.22
CTNNA1-234ENST00000522227 PRRC2BQ5JSZ5 2229 aaKnown RBP13.66□□□□□ -0.22
CTNNA1-234ENST00000522227 PRR33A8MZF0 331 aa13.66□□□□□ -0.22
CTNNA1-234ENST00000522227 FGBP02675 491 aa13.66□□□□□ -0.22
CTNNA1-234ENST00000522227 IRX5P78411 483 aaPredicted RBP13.66□□□□□ -0.22
CTNNA1-234ENST00000522227 GSTO1P78417 241 aa13.66□□□□□ -0.22
CTNNA1-234ENST00000522227 CSPP1Q1MSJ5 1256 aa13.66□□□□□ -0.22
CTNNA1-234ENST00000522227 CCDC27Q2M243 656 aa13.66□□□□□ -0.22
CTNNA1-234ENST00000522227 ACER1Q8TDN7 264 aa13.66□□□□□ -0.22
CTNNA1-234ENST00000522227 HLA-CQ95604 372 aa13.66□□□□□ -0.22
CTNNA1-234ENST00000522227 NOL10Q9BSC4 688 aaKnown RBP13.66□□□□□ -0.22
CTNNA1-234ENST00000522227 XIRP2A4UGR9 3374 aa13.65□□□□□ -0.22
CTNNA1-234ENST00000522227 ZBBXA8MT70 800 aa13.65□□□□□ -0.22
CTNNA1-234ENST00000522227 STRNO43815 780 aa13.65□□□□□ -0.22
CTNNA1-234ENST00000522227 KCNA10Q16322 511 aa13.65□□□□□ -0.22
CTNNA1-234ENST00000522227 NUP133Q8WUM0 1156 aa13.65□□□□□ -0.22
CTNNA1-234ENST00000522227 NSUN4Q96CB9 384 aaKnown RBP13.65□□□□□ -0.22
CTNNA1-234ENST00000522227 C12orf42Q96LP6 360 aa13.65□□□□□ -0.22
CTNNA1-234ENST00000522227 SPATC1LQ9H0A9 340 aa13.65□□□□□ -0.22
CTNNA1-234ENST00000522227 MTIF3Q9H2K0 278 aaKnown RBP13.65□□□□□ -0.22
CTNNA1-234ENST00000522227 DHX36Q9H2U1 1008 aaKnown RBP13.65□□□□□ -0.22
CTNNA1-234ENST00000522227 IL23AQ9NPF7 189 aa13.65□□□□□ -0.22
CTNNA1-234ENST00000522227 AATFQ9NY61 560 aaKnown RBP eCLIP13.65□□□□□ -0.22
CTNNA1-234ENST00000522227 COG5Q9UP83 839 aa13.65□□□□□ -0.22
CTNNA1-234ENST00000522227 PA2G4Q9UQ80 394 aaKnown RBP13.65□□□□□ -0.22
CTNNA1-234ENST00000522227 EPOPA6NHQ4 379 aa13.64□□□□□ -0.23
CTNNA1-234ENST00000522227 FOXP4Q8IVH2 680 aaPredicted RBP13.64□□□□□ -0.23
CTNNA1-234ENST00000522227 PHOX2BQ99453 314 aa13.64□□□□□ -0.23
CTNNA1-234ENST00000522227 CHD7Q9P2D1 2997 aa13.64□□□□□ -0.23
CTNNA1-234ENST00000522227 IL16Q14005 1332 aa13.64□□□□□ -0.23
CTNNA1-234ENST00000522227 ZNF521Q96K83 1311 aa13.64□□□□□ -0.23
CTNNA1-234ENST00000522227 MYADML2A6NDP7 307 aa13.63□□□□□ -0.23
CTNNA1-234ENST00000522227 ADAMTS4O75173 837 aa13.63□□□□□ -0.23
CTNNA1-234ENST00000522227 PGK2P07205 417 aa13.63□□□□□ -0.23
CTNNA1-234ENST00000522227 SSTR3P32745 418 aaPredicted RBP13.63□□□□□ -0.23
CTNNA1-234ENST00000522227 USP14P54578 494 aa13.63□□□□□ -0.23
CTNNA1-234ENST00000522227 CCL23P55773 120 aa13.63□□□□□ -0.23
CTNNA1-234ENST00000522227 LBX2Q6XYB7 198 aa13.63□□□□□ -0.23
CTNNA1-234ENST00000522227 ANKS1AQ92625 1134 aa13.63□□□□□ -0.23
CTNNA1-234ENST00000522227 TANGO6Q9C0B7 1094 aa13.63□□□□□ -0.23
CTNNA1-234ENST00000522227 GINM1Q9NU53 330 aa13.63□□□□□ -0.23
CTNNA1-234ENST00000522227 SLC4A7Q9Y6M7 1214 aa13.63□□□□□ -0.23
CTNNA1-234ENST00000522227 UMODL1Q5DID0 1318 aa13.63□□□□□ -0.23
CTNNA1-234ENST00000522227 MAP4K4O95819 1239 aaPredicted RBP13.62□□□□□ -0.23
CTNNA1-234ENST00000522227 AKR1A1P14550 325 aa13.62□□□□□ -0.23
CTNNA1-234ENST00000522227 ARNTL2Q8WYA1 636 aa13.62□□□□□ -0.23
CTNNA1-234ENST00000522227 XAGE2Q96GT9 111 aa13.62□□□□□ -0.23
CTNNA1-234ENST00000522227 GLT1D1Q96MS3 346 aa13.62□□□□□ -0.23
CTNNA1-234ENST00000522227 TSEN34Q9BSV6 310 aaKnown RBP13.62□□□□□ -0.23
CTNNA1-234ENST00000522227 USP44Q9H0E7 712 aa13.62□□□□□ -0.23
CTNNA1-234ENST00000522227 HMG20BQ9P0W2 317 aa13.62□□□□□ -0.23
CTNNA1-234ENST00000522227 LRP2BPQ9P2M1 347 aa13.62□□□□□ -0.23
CTNNA1-234ENST00000522227 PCDHA11Q9Y5I1 949 aa13.62□□□□□ -0.23
CTNNA1-234ENST00000522227 ZNF236Q9UL36 1845 aa13.62□□□□□ -0.23
CTNNA1-234ENST00000522227 FLT1P17948 1338 aa13.62□□□□□ -0.23
CTNNA1-234ENST00000522227 SYNRGQ9UMZ2 1314 aa13.62□□□□□ -0.23
CTNNA1-234ENST00000522227 TLR3O15455 904 aaKnown RBP13.61□□□□□ -0.23
CTNNA1-234ENST00000522227 CIAO1O76071 339 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms