RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 SOWAHBA6NEL2 793 aa11.35□□□□□ -0.59
CTNNA1-221ENST00000520339 FAM196BA6NMK8 535 aa11.35□□□□□ -0.59
CTNNA1-221ENST00000520339 IGSF3O75054 1194 aa11.35□□□□□ -0.59
CTNNA1-221ENST00000520339 FMNL1O95466 1100 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-221ENST00000520339 ZAP70P43403 619 aa11.35□□□□□ -0.59
CTNNA1-221ENST00000520339 NAA16Q6N069 864 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-221ENST00000520339 GADL1Q6ZQY3 521 aa11.35□□□□□ -0.59
CTNNA1-221ENST00000520339 RETREG3Q86VR2 466 aa11.35□□□□□ -0.59
CTNNA1-221ENST00000520339 SH3RF3Q8TEJ3 882 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-221ENST00000520339 WNT2BQ93097 391 aa11.35□□□□□ -0.59
CTNNA1-221ENST00000520339 EAF2Q96CJ1 260 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-221ENST00000520339 TRIM34Q9BYJ4 488 aa11.35□□□□□ -0.59
CTNNA1-221ENST00000520339 PIH1D3Q9NQM4 214 aaKnown RBP11.35□□□□□ -0.59
CTNNA1-221ENST00000520339 DBNLQ9UJU6 430 aaKnown RBP11.35□□□□□ -0.59
CTNNA1-221ENST00000520339 OTOFQ9HC10 1997 aa11.35□□□□□ -0.59
CTNNA1-221ENST00000520339 TRIM75PA6NK02 468 aa11.34□□□□□ -0.59
CTNNA1-221ENST00000520339 BAG3O95817 575 aa11.34□□□□□ -0.59
CTNNA1-221ENST00000520339 CAP2P40123 477 aa11.34□□□□□ -0.59
CTNNA1-221ENST00000520339 SLC4A8Q2Y0W8 1093 aa11.34□□□□□ -0.59
CTNNA1-221ENST00000520339 CEP85Q6P2H3 762 aa11.34□□□□□ -0.59
CTNNA1-221ENST00000520339 ADGRA1Q86SQ6 560 aa11.34□□□□□ -0.59
CTNNA1-221ENST00000520339 CCDC8Q9H0W5 538 aaPredicted RBP11.34□□□□□ -0.59
CTNNA1-221ENST00000520339 AATFQ9NY61 560 aaKnown RBP eCLIP11.34□□□□□ -0.59
CTNNA1-221ENST00000520339 PI4KBQ9UBF8 816 aa11.34□□□□□ -0.59
CTNNA1-221ENST00000520339 ZBED9Q6R2W3 1325 aa11.34□□□□□ -0.59
CTNNA1-221ENST00000520339 POM121CA8CG34 1229 aa11.33□□□□□ -0.6
CTNNA1-221ENST00000520339 MYCP01106 439 aaPredicted RBP11.33□□□□□ -0.6
CTNNA1-221ENST00000520339 FCGRTP55899 365 aa11.33□□□□□ -0.6
CTNNA1-221ENST00000520339 SPP2Q13103 211 aa11.33□□□□□ -0.6
CTNNA1-221ENST00000520339 METTL16Q86W50 562 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-221ENST00000520339 ZNF280CQ8ND82 737 aa11.33□□□□□ -0.6
CTNNA1-221ENST00000520339 RAET1EQ8TD07 263 aa11.33□□□□□ -0.6
CTNNA1-221ENST00000520339 PANK1Q8TE04 598 aa11.33□□□□□ -0.6
CTNNA1-221ENST00000520339 NOL10Q9BSC4 688 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-221ENST00000520339 DHX36Q9H2U1 1008 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-221ENST00000520339 TLR7Q9NYK1 1049 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-221ENST00000520339 HERC5Q9UII4 1024 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-221ENST00000520339 TSR3Q9UJK0 312 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-221ENST00000520339 AGTPBP1Q9UPW5 1226 aa11.33□□□□□ -0.6
CTNNA1-221ENST00000520339 LAMB1P07942 1786 aa11.33□□□□□ -0.6
CTNNA1-221ENST00000520339 COL2A1P02458 1487 aaPredicted RBP11.32□□□□□ -0.6
CTNNA1-221ENST00000520339 HTTP42858 3142 aa11.32□□□□□ -0.6
CTNNA1-221ENST00000520339 USP17L5A8MUK1 530 aa11.32□□□□□ -0.6
CTNNA1-221ENST00000520339 GRK4P32298 578 aa11.32□□□□□ -0.6
CTNNA1-221ENST00000520339 PRKCZQ05513 592 aa11.32□□□□□ -0.6
CTNNA1-221ENST00000520339 MTFR1Q15390 333 aa11.32□□□□□ -0.6
CTNNA1-221ENST00000520339 TREML2Q5T2D2 321 aa11.32□□□□□ -0.6
CTNNA1-221ENST00000520339 FOXP4Q8IVH2 680 aaPredicted RBP11.32□□□□□ -0.6
CTNNA1-221ENST00000520339 MAPKAPK5Q8IW41 473 aa11.32□□□□□ -0.6
CTNNA1-221ENST00000520339 EPS8L1Q8TE68 723 aa11.32□□□□□ -0.6
CTNNA1-221ENST00000520339 TGFBRAP1Q8WUH2 860 aa11.32□□□□□ -0.6
CTNNA1-221ENST00000520339 CALR3Q96L12 384 aaKnown RBP11.32□□□□□ -0.6
CTNNA1-221ENST00000520339 GABRQQ9UN88 632 aa11.32□□□□□ -0.6
CTNNA1-221ENST00000520339 MYPNQ86TC9 1320 aa11.32□□□□□ -0.6
CTNNA1-221ENST00000520339 CYP7A1P22680 504 aa11.31□□□□□ -0.6
CTNNA1-221ENST00000520339 DYNLL1P63167 89 aaKnown RBP11.31□□□□□ -0.6
CTNNA1-221ENST00000520339 JAG1P78504 1218 aa11.31□□□□□ -0.6
CTNNA1-221ENST00000520339 IRF5Q13568 498 aa11.31□□□□□ -0.6
CTNNA1-221ENST00000520339 ERC1Q8IUD2 1116 aa11.31□□□□□ -0.6
CTNNA1-221ENST00000520339 WDR18Q9BV38 432 aa11.31□□□□□ -0.6
CTNNA1-221ENST00000520339 DNAJC18Q9H819 358 aa11.31□□□□□ -0.6
CTNNA1-221ENST00000520339 FLT1P17948 1338 aa11.31□□□□□ -0.6
CTNNA1-221ENST00000520339 GJB1P08034 283 aa11.3□□□□□ -0.6
CTNNA1-221ENST00000520339 FLT3LGP49771 235 aa11.3□□□□□ -0.6
CTNNA1-221ENST00000520339 HMGCS2P54868 508 aa11.3□□□□□ -0.6
CTNNA1-221ENST00000520339 BLOC1S3Q6QNY0 202 aa11.3□□□□□ -0.6
CTNNA1-221ENST00000520339 RNF19BQ6ZMZ0 732 aa11.3□□□□□ -0.6
CTNNA1-221ENST00000520339 ANKRD13CQ8N6S4 541 aa11.3□□□□□ -0.6
CTNNA1-221ENST00000520339 SMCR8Q8TEV9 937 aaPredicted RBP11.3□□□□□ -0.6
CTNNA1-221ENST00000520339 SHISA4Q96DD7 197 aa11.3□□□□□ -0.6
CTNNA1-221ENST00000520339 ANTXR1Q9H6X2 564 aa11.3□□□□□ -0.6
CTNNA1-221ENST00000520339 PALD1Q9ULE6 856 aa11.3□□□□□ -0.6
CTNNA1-221ENST00000520339 EXOC6BQ9Y2D4 811 aa11.3□□□□□ -0.6
CTNNA1-221ENST00000520339 IDH1O75874 414 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-221ENST00000520339 ASNSP08243 561 aa11.29□□□□□ -0.6
CTNNA1-221ENST00000520339 CCL5P13501 91 aa11.29□□□□□ -0.6
CTNNA1-221ENST00000520339 BACE1P56817 501 aa11.29□□□□□ -0.6
CTNNA1-221ENST00000520339 UBXN2AP68543 259 aa11.29□□□□□ -0.6
CTNNA1-221ENST00000520339 NR6A1Q15406 480 aa11.29□□□□□ -0.6
CTNNA1-221ENST00000520339 FAM110CQ1W6H9 321 aa11.29□□□□□ -0.6
CTNNA1-221ENST00000520339 AACSQ86V21 672 aa11.29□□□□□ -0.6
CTNNA1-221ENST00000520339 SCUBE3Q8IX30 993 aa11.29□□□□□ -0.6
CTNNA1-221ENST00000520339 GCC1Q96CN9 775 aa11.29□□□□□ -0.6
CTNNA1-221ENST00000520339 AS3MTQ9HBK9 375 aa11.29□□□□□ -0.6
CTNNA1-221ENST00000520339 GINM1Q9NU53 330 aa11.29□□□□□ -0.6
CTNNA1-221ENST00000520339 SAP30BPQ9UHR5 308 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-221ENST00000520339 PCDHB3Q9Y5E6 796 aa11.29□□□□□ -0.6
CTNNA1-221ENST00000520339 TNPO2O14787 897 aaKnown RBP11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 ADCY3O60266 1144 aa11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 HOXA7P31268 230 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 GJA8P48165 433 aa11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 GCLCP48506 637 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 PABPC4Q13310 644 aaKnown RBP eCLIP11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 SHROOM1Q2M3G4 852 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 HSP90AB4PQ58FF6 505 aa11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 TMED8Q6PL24 325 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 UBE2Q1Q7Z7E8 422 aa11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 SIRT2Q8IXJ6 389 aa11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 RPAP2Q8IXW5 612 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-221ENST00000520339 MAGEB6Q8N7X4 407 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms