RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 CD2BP2O95400 341 aaKnown RBP6.12□□□□□ -1.43
SDCBP-207ENST00000520168 IFIT1P09914 478 aaKnown RBP6.12□□□□□ -1.43
SDCBP-207ENST00000520168 RTP1P59025 263 aa6.12□□□□□ -1.43
SDCBP-207ENST00000520168 MRPS5P82675 430 aaKnown RBP6.12□□□□□ -1.43
SDCBP-207ENST00000520168 NFIAQ12857 509 aa6.12□□□□□ -1.43
SDCBP-207ENST00000520168 FOXC1Q12948 553 aa6.12□□□□□ -1.43
SDCBP-207ENST00000520168 HIC1Q14526 733 aa6.12□□□□□ -1.43
SDCBP-207ENST00000520168 TMEM132AQ24JP5 1023 aa6.12□□□□□ -1.43
SDCBP-207ENST00000520168 RFX7Q2KHR2 1363 aa6.12□□□□□ -1.43
SDCBP-207ENST00000520168 TWISTNBQ3B726 338 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-207ENST00000520168 TREML2Q5T2D2 321 aa6.12□□□□□ -1.43
SDCBP-207ENST00000520168 C1orf53Q5VUE5 145 aa6.12□□□□□ -1.43
SDCBP-207ENST00000520168 WDFY4Q6ZS81 3184 aa6.12□□□□□ -1.43
SDCBP-207ENST00000520168 METTL3Q86U44 580 aaKnown RBP6.12□□□□□ -1.43
SDCBP-207ENST00000520168 CCAR1Q8IX12 1150 aaKnown RBP6.12□□□□□ -1.43
SDCBP-207ENST00000520168 ZGPATQ8N5A5 531 aaKnown RBP6.12□□□□□ -1.43
SDCBP-207ENST00000520168 ZNF280CQ8ND82 737 aa6.12□□□□□ -1.43
SDCBP-207ENST00000520168 GPRC5AQ8NFJ5 357 aa6.12□□□□□ -1.43
SDCBP-207ENST00000520168 ADAMTS19Q8TE59 1207 aa6.12□□□□□ -1.43
SDCBP-207ENST00000520168 ZNF594Q96JF6 807 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-207ENST00000520168 ASB2Q96Q27 587 aa6.12□□□□□ -1.43
SDCBP-207ENST00000520168 UHRF1Q96T88 793 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-207ENST00000520168 GAS2L1Q99501 681 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-207ENST00000520168 AS3MTQ9HBK9 375 aa6.12□□□□□ -1.43
SDCBP-207ENST00000520168 SALL1Q9NSC2 1324 aa6.12□□□□□ -1.43
SDCBP-207ENST00000520168 IQSEC3Q9UPP2 1182 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-207ENST00000520168 GBF1Q92538 1859 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 UTYO14607 1347 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 KBTBD13C9JR72 458 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 LDHBP07195 334 aaKnown RBP6.11□□□□□ -1.43
SDCBP-207ENST00000520168 HOXA7P31268 230 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-207ENST00000520168 CCNA1P78396 465 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 IRX3P78415 501 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-207ENST00000520168 SNX17Q15036 470 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 PUM3Q15397 648 aaKnown RBP6.11□□□□□ -1.43
SDCBP-207ENST00000520168 SH3D19Q5HYK7 790 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 METTL24Q5JXM2 366 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 C9orf50Q5SZB4 431 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 MFSD14CQ5VZR4 134 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 ZSCAN29Q8IWY8 852 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-207ENST00000520168 TSPYL6Q8N831 410 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 VGLL2Q8N8G2 317 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 ARRDC4Q8NCT1 418 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 USP6NLQ92738 828 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 RNPC3Q96LT9 517 aaKnown RBP6.11□□□□□ -1.43
SDCBP-207ENST00000520168 ASCC2Q9H1I8 757 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-207ENST00000520168 USP40Q9NVE5 1235 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 C9orf78Q9NZ63 289 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-207ENST00000520168 DDX20Q9UHI6 824 aaKnown RBP6.11□□□□□ -1.43
SDCBP-207ENST00000520168 RAPGEFL1Q9UHV5 662 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 ADAMTS8Q9UP79 889 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 ATP11BQ9Y2G3 1177 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 CDK5RAP2Q96SN8 1893 aa6.11□□□□□ -1.43
SDCBP-207ENST00000520168 TCF20Q9UGU0 1960 aaKnown RBP6.1□□□□□ -1.43
SDCBP-207ENST00000520168 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-207ENST00000520168 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-207ENST00000520168 USP17L5A8MUK1 530 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 SEMA3EO15041 775 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 ALDH1L1O75891 902 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 MAP4K4O95819 1239 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-207ENST00000520168 AVPP01185 164 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 SLC5A1P13866 664 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 CCND3P30281 292 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-207ENST00000520168 RGS3P49796 1198 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 HMGCS2P54868 508 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 ERVK-9P63128 1117 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 ERVK-24P63145 666 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 SPP2Q13103 211 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 AAK1Q2M2I8 961 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 MORN1Q5T089 497 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 BEND3Q5T5X7 828 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 LCE2AQ5TA79 106 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-207ENST00000520168 CCDC174Q6PII3 467 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 G2E3Q7L622 706 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 GPR142Q7Z601 462 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 PLEKHH3Q7Z736 793 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 USP38Q8NB14 1042 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 BADQ92934 168 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 ZNF576Q9H609 170 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 CWC22Q9HCG8 908 aaKnown RBP6.1□□□□□ -1.43
SDCBP-207ENST00000520168 PRDM5Q9NQX1 630 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-207ENST00000520168 GNL3LQ9NVN8 582 aaKnown RBP6.1□□□□□ -1.43
SDCBP-207ENST00000520168 TOR4AQ9NXH8 423 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 TMOD4Q9NZQ9 345 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 TACC3Q9Y6A5 838 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 PIEZO1Q92508 2521 aa6.1□□□□□ -1.43
SDCBP-207ENST00000520168 SIPA1L1O43166 1804 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 GAKO14976 1311 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 C19orf81C9J6K1 198 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 APAF1O14727 1248 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 HOXC6P09630 235 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 FGFR2P21802 821 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 PRDX5P30044 214 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 BACE1P56817 501 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 HERVK_113P62684 666 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 MAP2K5Q13163 448 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 GRIN2CQ14957 1233 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 DIXDC1Q155Q3 683 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 CTC1Q2NKJ3 1217 aa6.09□□□□□ -1.43
SDCBP-207ENST00000520168 EPHA10Q5JZY3 1008 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms