RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 RFPL1O75677 317 aa8.67□□□□□ -1.02
NPHP3-211ENST00000515289 EIF2AK2P19525 551 aaKnown RBP8.67□□□□□ -1.02
NPHP3-211ENST00000515289 PPP2R2AP63151 447 aa8.67□□□□□ -1.02
NPHP3-211ENST00000515289 IKBKEQ14164 716 aa8.67□□□□□ -1.02
NPHP3-211ENST00000515289 INPP5AQ14642 412 aa8.67□□□□□ -1.02
NPHP3-211ENST00000515289 MLC1Q15049 377 aa8.67□□□□□ -1.02
NPHP3-211ENST00000515289 SPTY2D1Q68D10 685 aaPredicted RBP8.67□□□□□ -1.02
NPHP3-211ENST00000515289 PKN3Q6P5Z2 889 aa8.67□□□□□ -1.02
NPHP3-211ENST00000515289 MAGEB6Q8N7X4 407 aa8.67□□□□□ -1.02
NPHP3-211ENST00000515289 ACSBG1Q96GR2 724 aa8.67□□□□□ -1.02
NPHP3-211ENST00000515289 YIPF4Q9BSR8 244 aa8.67□□□□□ -1.02
NPHP3-211ENST00000515289 NUCKS1Q9H1E3 243 aaKnown RBP8.67□□□□□ -1.02
NPHP3-211ENST00000515289 TRIM39Q9HCM9 518 aa8.67□□□□□ -1.02
NPHP3-211ENST00000515289 ENAMQ9NRM1 1142 aa8.67□□□□□ -1.02
NPHP3-211ENST00000515289 ADAM30Q9UKF2 790 aa8.67□□□□□ -1.02
NPHP3-211ENST00000515289 PTPRKQ15262 1439 aa8.66□□□□□ -1.02
NPHP3-211ENST00000515289 SENP3-EIF4A1A0A087X0R7 540 aa8.66□□□□□ -1.02
NPHP3-211ENST00000515289 FAM86C2PA6NEL3 165 aa8.66□□□□□ -1.02
NPHP3-211ENST00000515289 SCARF1Q14162 830 aa8.66□□□□□ -1.02
NPHP3-211ENST00000515289 GFOD2Q3B7J2 385 aa8.66□□□□□ -1.02
NPHP3-211ENST00000515289 KSR2Q6VAB6 950 aa8.66□□□□□ -1.02
NPHP3-211ENST00000515289 DGKHQ86XP1 1220 aa8.66□□□□□ -1.02
NPHP3-211ENST00000515289 DHRS1Q96LJ7 313 aa8.66□□□□□ -1.02
NPHP3-211ENST00000515289 CCDC8Q9H0W5 538 aaPredicted RBP8.66□□□□□ -1.02
NPHP3-211ENST00000515289 KRT82Q9NSB4 513 aa8.66□□□□□ -1.02
NPHP3-211ENST00000515289 TERF2IPQ9NYB0 399 aa8.66□□□□□ -1.02
NPHP3-211ENST00000515289 SUSD2Q9UGT4 822 aa8.66□□□□□ -1.02
NPHP3-211ENST00000515289 TROQ12816 1431 aaPredicted RBP8.65□□□□□ -1.02
NPHP3-211ENST00000515289 RAB3GAP2Q9H2M9 1393 aa8.65□□□□□ -1.02
NPHP3-211ENST00000515289 CCDC189A1A4V9 331 aa8.65□□□□□ -1.02
NPHP3-211ENST00000515289 TNFRSF10AO00220 468 aa8.65□□□□□ -1.02
NPHP3-211ENST00000515289 EIF4EBP3O60516 100 aaPredicted RBP8.65□□□□□ -1.02
NPHP3-211ENST00000515289 CD33P20138 364 aa8.65□□□□□ -1.02
NPHP3-211ENST00000515289 PCBP1Q15365 356 aaKnown RBP eCLIP8.65□□□□□ -1.02
NPHP3-211ENST00000515289 ZRSR2Q15696 482 aaKnown RBP8.65□□□□□ -1.02
NPHP3-211ENST00000515289 FAM182BQ5T319 152 aa8.65□□□□□ -1.02
NPHP3-211ENST00000515289 SLC4A10Q6U841 1118 aa8.65□□□□□ -1.02
NPHP3-211ENST00000515289 CYFIP1Q7L576 1253 aa8.65□□□□□ -1.02
NPHP3-211ENST00000515289 ARPC5LQ9BPX5 153 aa8.65□□□□□ -1.02
NPHP3-211ENST00000515289 SOX17Q9H6I2 414 aaPredicted RBP8.65□□□□□ -1.02
NPHP3-211ENST00000515289 AVENQ9NQS1 362 aaPredicted RBP8.65□□□□□ -1.02
NPHP3-211ENST00000515289 GNL3LQ9NVN8 582 aaKnown RBP8.65□□□□□ -1.02
NPHP3-211ENST00000515289 DNAJB12Q9NXW2 375 aaKnown RBP8.65□□□□□ -1.02
NPHP3-211ENST00000515289 ZNF180Q9UJW8 692 aa8.65□□□□□ -1.02
NPHP3-211ENST00000515289 PTPN23Q9H3S7 1636 aa8.65□□□□□ -1.03
NPHP3-211ENST00000515289 MIA2Q96PC5 1412 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 SETD5Q9C0A6 1442 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 CLSPNQ9HAW4 1339 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 FAM177BA6PVY3 158 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 H7C1W4 665 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 ABLIM3O94929 683 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 ASLP04424 464 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 PABPC1P11940 636 aaKnown RBP8.64□□□□□ -1.03
NPHP3-211ENST00000515289 RAG1P15918 1043 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 CDC27P30260 824 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 NEK4P51957 841 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 PMS1P54277 932 aaKnown RBP8.64□□□□□ -1.03
NPHP3-211ENST00000515289 ZFYVE27Q5T4F4 411 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 NSMFQ6X4W1 530 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 RIPOR1Q6ZS17 1223 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 MICALL1Q8N3F8 863 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 TRIM8Q9BZR9 551 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 LRP2BPQ9P2M1 347 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 KLHL3Q9UH77 587 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 TRHDEQ9UKU6 1024 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 ERCC6L2Q5T890 1561 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 ATP10BO94823 1461 aa8.64□□□□□ -1.03
NPHP3-211ENST00000515289 PTPRGP23470 1445 aa8.63□□□□□ -1.03
NPHP3-211ENST00000515289 ADCY10Q96PN6 1610 aa8.63□□□□□ -1.03
NPHP3-211ENST00000515289 GABRDO14764 452 aa8.63□□□□□ -1.03
NPHP3-211ENST00000515289 EFCAB14O75071 495 aa8.63□□□□□ -1.03
NPHP3-211ENST00000515289 CAPNS1P04632 268 aa8.63□□□□□ -1.03
NPHP3-211ENST00000515289 SEPT7Q16181 437 aaKnown RBP8.63□□□□□ -1.03
NPHP3-211ENST00000515289 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.63□□□□□ -1.03
NPHP3-211ENST00000515289 SYDE2Q5VT97 1194 aa8.63□□□□□ -1.03
NPHP3-211ENST00000515289 CXorf57Q6NSI4 855 aaKnown RBP8.63□□□□□ -1.03
NPHP3-211ENST00000515289 BRAPQ7Z569 592 aa8.63□□□□□ -1.03
NPHP3-211ENST00000515289 ZNF227Q86WZ6 799 aa8.63□□□□□ -1.03
NPHP3-211ENST00000515289 GSTCDQ8NEC7 633 aa8.63□□□□□ -1.03
NPHP3-211ENST00000515289 SLC7A14Q8TBB6 771 aa8.63□□□□□ -1.03
NPHP3-211ENST00000515289 SLC7A3Q8WY07 619 aa8.63□□□□□ -1.03
NPHP3-211ENST00000515289 OSBP2Q969R2 916 aa8.63□□□□□ -1.03
NPHP3-211ENST00000515289 SCYL1Q96KG9 808 aa8.63□□□□□ -1.03
NPHP3-211ENST00000515289 TTC1Q99614 292 aa8.63□□□□□ -1.03
NPHP3-211ENST00000515289 MTFR1LQ9H019 292 aa8.63□□□□□ -1.03
NPHP3-211ENST00000515289 NOB1Q9ULX3 412 aaKnown RBP8.63□□□□□ -1.03
NPHP3-211ENST00000515289 TNPO3Q9Y5L0 923 aaKnown RBP8.63□□□□□ -1.03
NPHP3-211ENST00000515289 SOX1O00570 391 aaPredicted RBP8.62□□□□□ -1.03
NPHP3-211ENST00000515289 PRODHO43272 600 aa8.62□□□□□ -1.03
NPHP3-211ENST00000515289 ITGAVP06756 1048 aa8.62□□□□□ -1.03
NPHP3-211ENST00000515289 CENPBP07199 599 aaPredicted RBP8.62□□□□□ -1.03
NPHP3-211ENST00000515289 C6orf222P0C671 652 aaPredicted RBP8.62□□□□□ -1.03
NPHP3-211ENST00000515289 CABP4P57796 275 aa8.62□□□□□ -1.03
NPHP3-211ENST00000515289 PRR20EP86478 221 aa8.62□□□□□ -1.03
NPHP3-211ENST00000515289 PRR20CP86479 221 aa8.62□□□□□ -1.03
NPHP3-211ENST00000515289 PRR20DP86480 221 aa8.62□□□□□ -1.03
NPHP3-211ENST00000515289 PRR20BP86481 221 aa8.62□□□□□ -1.03
NPHP3-211ENST00000515289 PRR20AP86496 221 aa8.62□□□□□ -1.03
NPHP3-211ENST00000515289 PURAQ00577 322 aaKnown RBP8.62□□□□□ -1.03
NPHP3-211ENST00000515289 HNRNPUQ00839 825 aaKnown RBP eCLIP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms