RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 PUM3Q15397 648 aaKnown RBP22.09■■□□□ 1.13
HMG20B-213ENST00000488973 RNF26Q9BY78 433 aaPredicted RBP22.09■■□□□ 1.13
HMG20B-213ENST00000488973 NACAP1Q9BZK3 213 aa22.09■■□□□ 1.13
HMG20B-213ENST00000488973 ARMT1Q9H993 441 aa22.09■■□□□ 1.13
HMG20B-213ENST00000488973 PDE11AQ9HCR9 933 aa22.09■■□□□ 1.13
HMG20B-213ENST00000488973 TOGARAM1Q9Y4F4 1720 aa22.09■■□□□ 1.13
HMG20B-213ENST00000488973 BCL9LQ86UU0 1499 aa22.08■■□□□ 1.13
HMG20B-213ENST00000488973 PPP1R3GB7ZBB8 358 aa22.08■■□□□ 1.13
HMG20B-213ENST00000488973 GYPCP04921 128 aa22.08■■□□□ 1.13
HMG20B-213ENST00000488973 AFMP43652 599 aa22.08■■□□□ 1.13
HMG20B-213ENST00000488973 LMAN1P49257 510 aa22.08■■□□□ 1.13
HMG20B-213ENST00000488973 GYS2P54840 703 aa22.08■■□□□ 1.13
HMG20B-213ENST00000488973 STX17P56962 302 aa22.08■■□□□ 1.13
HMG20B-213ENST00000488973 PPP2R5BQ15173 497 aa22.08■■□□□ 1.13
HMG20B-213ENST00000488973 WHAMMP3Q1A5X7 153 aa22.08■■□□□ 1.13
HMG20B-213ENST00000488973 RRP12Q5JTH9 1297 aaKnown RBP22.08■■□□□ 1.13
HMG20B-213ENST00000488973 CCDC82Q8N4S0 544 aa22.08■■□□□ 1.13
HMG20B-213ENST00000488973 CNKSR2Q8WXI2 1034 aa22.08■■□□□ 1.13
HMG20B-213ENST00000488973 ZKSCAN3Q9BRR0 538 aa22.08■■□□□ 1.13
HMG20B-213ENST00000488973 BMP15O95972 392 aa22.08■■□□□ 1.12
HMG20B-213ENST00000488973 FGFR2P21802 821 aa22.08■■□□□ 1.12
HMG20B-213ENST00000488973 PIP4K2BP78356 416 aa22.08■■□□□ 1.12
HMG20B-213ENST00000488973 ZNF654Q8IZM8 581 aa22.08■■□□□ 1.12
HMG20B-213ENST00000488973 SLC35F6Q8N357 371 aa22.08■■□□□ 1.12
HMG20B-213ENST00000488973 FERMT2Q96AC1 680 aa22.08■■□□□ 1.12
HMG20B-213ENST00000488973 EPSTI1Q96J88 318 aa22.08■■□□□ 1.12
HMG20B-213ENST00000488973 TRERF1Q96PN7 1200 aa22.08■■□□□ 1.12
HMG20B-213ENST00000488973 GBP3Q9H0R5 595 aa22.08■■□□□ 1.12
HMG20B-213ENST00000488973 LRP5O75197 1615 aa22.07■■□□□ 1.12
HMG20B-213ENST00000488973 XBP1P17861 261 aa22.07■■□□□ 1.12
HMG20B-213ENST00000488973 ACTN2P35609 894 aa22.07■■□□□ 1.12
HMG20B-213ENST00000488973 MCM6Q14566 821 aa22.07■■□□□ 1.12
HMG20B-213ENST00000488973 CMTR1Q8N1G2 835 aaKnown RBP22.07■■□□□ 1.12
HMG20B-213ENST00000488973 NAPGQ99747 312 aaPredicted RBP22.07■■□□□ 1.12
HMG20B-213ENST00000488973 COL22A1Q8NFW1 1626 aaPredicted RBP22.07■■□□□ 1.12
HMG20B-213ENST00000488973 PNPLA7Q6ZV29 1317 aa22.07■■□□□ 1.12
HMG20B-213ENST00000488973 FXR1P51114 621 aaKnown RBP eCLIP22.07■■□□□ 1.12
HMG20B-213ENST00000488973 RNF41Q9H4P4 317 aaPredicted RBP22.07■■□□□ 1.12
HMG20B-213ENST00000488973 ABCB6Q9NP58 842 aa22.07■■□□□ 1.12
HMG20B-213ENST00000488973 MROH5Q6ZUA9 1318 aa22.06■■□□□ 1.12
HMG20B-213ENST00000488973 IRS4O14654 1257 aaPredicted RBP22.06■■□□□ 1.12
HMG20B-213ENST00000488973 TDO2P48775 406 aa22.06■■□□□ 1.12
HMG20B-213ENST00000488973 SYMPKQ92797 1274 aaKnown RBP22.06■■□□□ 1.12
HMG20B-213ENST00000488973 TOMM22Q9NS69 142 aa22.06■■□□□ 1.12
HMG20B-213ENST00000488973 NUP98P52948 1817 aa22.06■■□□□ 1.12
HMG20B-213ENST00000488973 CTAGE15A4D2H0 777 aa22.06■■□□□ 1.12
HMG20B-213ENST00000488973 LRRC10BA6NIK2 292 aa22.06■■□□□ 1.12
HMG20B-213ENST00000488973 CTAGE8P0CG41 777 aa22.06■■□□□ 1.12
HMG20B-213ENST00000488973 GPTP24298 496 aa22.06■■□□□ 1.12
HMG20B-213ENST00000488973 HLFQ16534 295 aa22.06■■□□□ 1.12
HMG20B-213ENST00000488973 CTAGE6Q86UF2 777 aa22.06■■□□□ 1.12
HMG20B-213ENST00000488973 CTAGE4Q8IX94 777 aa22.06■■□□□ 1.12
HMG20B-213ENST00000488973 NUP133Q8WUM0 1156 aa22.06■■□□□ 1.12
HMG20B-213ENST00000488973 BTG4Q9NY30 223 aa22.06■■□□□ 1.12
HMG20B-213ENST00000488973 LIMA1Q9UHB6 759 aaKnown RBP22.06■■□□□ 1.12
HMG20B-213ENST00000488973 DNAJC10Q8IXB1 793 aa22.05■■□□□ 1.12
HMG20B-213ENST00000488973 VPS18Q9P253 973 aa22.05■■□□□ 1.12
HMG20B-213ENST00000488973 PDE8AO60658 829 aa22.05■■□□□ 1.12
HMG20B-213ENST00000488973 STARD3NLO95772 234 aa22.05■■□□□ 1.12
HMG20B-213ENST00000488973 KRT2P35908 639 aa22.05■■□□□ 1.12
HMG20B-213ENST00000488973 TRIM14Q14142 442 aa22.05■■□□□ 1.12
HMG20B-213ENST00000488973 HOMEZQ8IX15 550 aa22.05■■□□□ 1.12
HMG20B-213ENST00000488973 TMOD3Q9NYL9 352 aa22.05■■□□□ 1.12
HMG20B-213ENST00000488973 COL14A1Q05707 1796 aaKnown RBP22.04■■□□□ 1.12
HMG20B-213ENST00000488973 PRKAB2O43741 272 aa22.04■■□□□ 1.12
HMG20B-213ENST00000488973 GUCY2CP25092 1073 aa22.04■■□□□ 1.12
HMG20B-213ENST00000488973 AKAP17AQ02040 695 aaKnown RBP22.04■■□□□ 1.12
HMG20B-213ENST00000488973 RASGRF1Q13972 1273 aa22.04■■□□□ 1.12
HMG20B-213ENST00000488973 CYP26C1Q6V0L0 522 aa22.04■■□□□ 1.12
HMG20B-213ENST00000488973 CEP120Q8N960 986 aa22.04■■□□□ 1.12
HMG20B-213ENST00000488973 ACRBPQ8NEB7 543 aa22.04■■□□□ 1.12
HMG20B-213ENST00000488973 CDC5LQ99459 802 aaKnown RBP22.04■■□□□ 1.12
HMG20B-213ENST00000488973 PHF20Q9BVI0 1012 aa22.04■■□□□ 1.12
HMG20B-213ENST00000488973 ABHD10Q9NUJ1 306 aa22.04■■□□□ 1.12
HMG20B-213ENST00000488973 SLC4A4Q9Y6R1 1079 aa22.04■■□□□ 1.12
HMG20B-213ENST00000488973 PLCH1Q4KWH8 1693 aa22.04■■□□□ 1.12
HMG20B-213ENST00000488973 RTL9Q8NET4 1388 aa22.04■■□□□ 1.12
HMG20B-213ENST00000488973 SLC5A1P13866 664 aa22.04■■□□□ 1.12
HMG20B-213ENST00000488973 ERVK-24P63145 666 aa22.04■■□□□ 1.12
HMG20B-213ENST00000488973 SPAG1Q07617 926 aa22.04■■□□□ 1.12
HMG20B-213ENST00000488973 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.03■■□□□ 1.12
HMG20B-213ENST00000488973 CASP1P29466 404 aa22.03■■□□□ 1.12
HMG20B-213ENST00000488973 ARHGAP25P42331 645 aa22.03■■□□□ 1.12
HMG20B-213ENST00000488973 LEKR1Q6ZMV7 388 aa22.03■■□□□ 1.12
HMG20B-213ENST00000488973 SMYD4Q8IYR2 804 aaPredicted RBP22.03■■□□□ 1.12
HMG20B-213ENST00000488973 LCORLQ8N3X6 602 aa22.03■■□□□ 1.12
HMG20B-213ENST00000488973 BANK1Q8NDB2 785 aa22.03■■□□□ 1.12
HMG20B-213ENST00000488973 SHISA4Q96DD7 197 aa22.03■■□□□ 1.12
HMG20B-213ENST00000488973 UBAC1Q9BSL1 405 aa22.03■■□□□ 1.12
HMG20B-213ENST00000488973 FAM205CA6NFA0 338 aa22.02■■□□□ 1.12
HMG20B-213ENST00000488973 KRT31Q15323 416 aa22.02■■□□□ 1.12
HMG20B-213ENST00000488973 CTNND2Q9UQB3 1225 aa22.02■■□□□ 1.12
HMG20B-213ENST00000488973 CEP83Q9Y592 693 aa22.02■■□□□ 1.12
HMG20B-213ENST00000488973 RPS6KA5O75582 802 aa22.02■■□□□ 1.12
HMG20B-213ENST00000488973 IVLP07476 585 aa22.02■■□□□ 1.12
HMG20B-213ENST00000488973 RHOXF2BP0C7M4 288 aa22.02■■□□□ 1.12
HMG20B-213ENST00000488973 VSNL1P62760 191 aa22.02■■□□□ 1.12
HMG20B-213ENST00000488973 CASP8Q14790 479 aa22.02■■□□□ 1.12
HMG20B-213ENST00000488973 PKN1Q16512 942 aa22.02■■□□□ 1.12
HMG20B-213ENST00000488973 RHOXF2Q9BQY4 288 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms