RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 CCDC144CPQ8IYA2 1237 aa21.09■□□□□ 0.97
COL16A1-215ENST00000488897 CEP57L1Q8IYX8 460 aa21.09■□□□□ 0.97
COL16A1-215ENST00000488897 ARID3AQ99856 593 aa21.09■□□□□ 0.97
COL16A1-215ENST00000488897 CRNKL1Q9BZJ0 848 aaKnown RBP21.09■□□□□ 0.97
COL16A1-215ENST00000488897 MAST2Q6P0Q8 1798 aa21.09■□□□□ 0.97
COL16A1-215ENST00000488897 PATL2C9JE40 543 aaKnown RBP21.09■□□□□ 0.97
COL16A1-215ENST00000488897 TNNT1P13805 278 aa21.09■□□□□ 0.97
COL16A1-215ENST00000488897 DEFB129Q9H1M3 183 aa21.09■□□□□ 0.97
COL16A1-215ENST00000488897 PCDHA7Q9UN72 937 aa21.09■□□□□ 0.97
COL16A1-215ENST00000488897 ZC3H4Q9UPT8 1303 aaKnown RBP21.09■□□□□ 0.97
COL16A1-215ENST00000488897 MYO1BO43795 1136 aa21.08■□□□□ 0.97
COL16A1-215ENST00000488897 PRDM1O75626 825 aa21.08■□□□□ 0.97
COL16A1-215ENST00000488897 CTR9Q6PD62 1173 aa21.08■□□□□ 0.97
COL16A1-215ENST00000488897 ANKRD7Q92527 254 aa21.08■□□□□ 0.97
COL16A1-215ENST00000488897 C16orf45Q96MC5 204 aaPredicted RBP21.08■□□□□ 0.97
COL16A1-215ENST00000488897 MRIQ9BWK5 157 aa21.08■□□□□ 0.97
COL16A1-215ENST00000488897 MKRN1Q9UHC7 482 aaKnown RBP21.08■□□□□ 0.97
COL16A1-215ENST00000488897 CDK5RAP2Q96SN8 1893 aa21.08■□□□□ 0.97
COL16A1-215ENST00000488897 SYCP1Q15431 976 aa21.08■□□□□ 0.96
COL16A1-215ENST00000488897 TPD52L1Q16890 204 aaPredicted RBP21.08■□□□□ 0.96
COL16A1-215ENST00000488897 NBPF12Q5TAG4 269 aaPredicted RBP21.08■□□□□ 0.96
COL16A1-215ENST00000488897 DHX40Q8IX18 779 aaKnown RBP21.08■□□□□ 0.96
COL16A1-215ENST00000488897 ZNF784Q8NCA9 323 aaPredicted RBP21.08■□□□□ 0.96
COL16A1-215ENST00000488897 FMR1NBQ8N0W7 255 aaPredicted RBP21.07■□□□□ 0.96
COL16A1-215ENST00000488897 PDCL2Q8N4E4 241 aa21.07■□□□□ 0.96
COL16A1-215ENST00000488897 MTMR14Q8NCE2 650 aa21.07■□□□□ 0.96
COL16A1-215ENST00000488897 IQCA1LA6NCM1 817 aa21.07■□□□□ 0.96
COL16A1-215ENST00000488897 KCNG4Q8TDN1 519 aa21.07■□□□□ 0.96
COL16A1-215ENST00000488897 C8orf76Q96K31 380 aa21.07■□□□□ 0.96
COL16A1-215ENST00000488897 NAPBQ9H115 298 aa21.07■□□□□ 0.96
COL16A1-215ENST00000488897 ZNF408Q9H9D4 720 aa21.07■□□□□ 0.96
COL16A1-215ENST00000488897 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.07■□□□□ 0.96
COL16A1-215ENST00000488897 SF3A1Q15459 793 aaKnown RBP21.06■□□□□ 0.96
COL16A1-215ENST00000488897 MOB2Q70IA6 237 aa21.06■□□□□ 0.96
COL16A1-215ENST00000488897 KRT26Q7Z3Y9 468 aa21.06■□□□□ 0.96
COL16A1-215ENST00000488897 LINC00301Q8NCQ3 95 aa21.06■□□□□ 0.96
COL16A1-215ENST00000488897 SDF4Q9BRK5 362 aa21.06■□□□□ 0.96
COL16A1-215ENST00000488897 YEATS4O95619 227 aa21.06■□□□□ 0.96
COL16A1-215ENST00000488897 STK38Q15208 465 aa21.06■□□□□ 0.96
COL16A1-215ENST00000488897 BRAPQ7Z569 592 aa21.06■□□□□ 0.96
COL16A1-215ENST00000488897 NBPF3Q9H094 633 aa21.06■□□□□ 0.96
COL16A1-215ENST00000488897 OSBPL5Q9H0X9 879 aaPredicted RBP21.06■□□□□ 0.96
COL16A1-215ENST00000488897 PRC1O43663 620 aa21.05■□□□□ 0.96
COL16A1-215ENST00000488897 POLR3DP05423 398 aaPredicted RBP21.05■□□□□ 0.96
COL16A1-215ENST00000488897 PPP4R3BQ5MIZ7 849 aa21.05■□□□□ 0.96
COL16A1-215ENST00000488897 RGS22Q8NE09 1264 aa21.05■□□□□ 0.96
COL16A1-215ENST00000488897 NCOA7Q8NI08 942 aa21.05■□□□□ 0.96
COL16A1-215ENST00000488897 POLR3EQ9NVU0 708 aa21.05■□□□□ 0.96
COL16A1-215ENST00000488897 PPFIA3O75145 1194 aa21.05■□□□□ 0.96
COL16A1-215ENST00000488897 MB21D2Q8IYB1 491 aaPredicted RBP21.05■□□□□ 0.96
COL16A1-215ENST00000488897 FBXO18Q8NFZ0 1043 aa21.05■□□□□ 0.96
COL16A1-215ENST00000488897 WDR90Q96KV7 1748 aa21.04■□□□□ 0.96
COL16A1-215ENST00000488897 WDR19Q8NEZ3 1342 aa21.04■□□□□ 0.96
COL16A1-215ENST00000488897 USP50Q70EL3 339 aaPredicted RBP21.04■□□□□ 0.96
COL16A1-215ENST00000488897 DCPSQ96C86 337 aaKnown RBP21.04■□□□□ 0.96
COL16A1-215ENST00000488897 TMOD2Q9NZR1 351 aa21.04■□□□□ 0.96
COL16A1-215ENST00000488897 ECM29Q5VYK3 1845 aa21.04■□□□□ 0.96
COL16A1-215ENST00000488897 KLF18A0A0U1RQI7 1052 aa21.04■□□□□ 0.96
COL16A1-215ENST00000488897 ZRSR1Q15695 479 aaKnown RBP21.04■□□□□ 0.96
COL16A1-215ENST00000488897 RALYLQ86SE5 291 aaKnown RBP21.04■□□□□ 0.96
COL16A1-215ENST00000488897 CSRNP1Q96S65 589 aa21.04■□□□□ 0.96
COL16A1-215ENST00000488897 ORC3Q9UBD5 711 aaPredicted RBP21.04■□□□□ 0.96
COL16A1-215ENST00000488897 KIF3CO14782 793 aa21.03■□□□□ 0.96
COL16A1-215ENST00000488897 CPLX1O14810 134 aa21.03■□□□□ 0.96
COL16A1-215ENST00000488897 TBC1D10CQ8IV04 446 aa21.03■□□□□ 0.96
COL16A1-215ENST00000488897 CCDC112Q8NEF3 446 aa21.03■□□□□ 0.96
COL16A1-215ENST00000488897 TEPSINQ96N21 525 aa21.03■□□□□ 0.96
COL16A1-215ENST00000488897 IDI2Q9BXS1 227 aa21.03■□□□□ 0.96
COL16A1-215ENST00000488897 GPHNQ9NQX3 736 aaPredicted RBP21.03■□□□□ 0.96
COL16A1-215ENST00000488897 A0A1B0GVL5 298 aa21.03■□□□□ 0.96
COL16A1-215ENST00000488897 GOLGA8BA8MQT2 603 aa21.03■□□□□ 0.96
COL16A1-215ENST00000488897 AOPEPQ8N6M6 819 aa21.03■□□□□ 0.96
COL16A1-215ENST00000488897 BPIFA3Q9BQP9 254 aa21.03■□□□□ 0.96
COL16A1-215ENST00000488897 KIAA1468Q9P260 1216 aa21.03■□□□□ 0.96
COL16A1-215ENST00000488897 ZNF213O14771 459 aa21.02■□□□□ 0.96
COL16A1-215ENST00000488897 SPTLC2O15270 562 aa21.02■□□□□ 0.96
COL16A1-215ENST00000488897 SKILP12757 684 aa21.02■□□□□ 0.96
COL16A1-215ENST00000488897 PLCG2P16885 1265 aa21.02■□□□□ 0.96
COL16A1-215ENST00000488897 NDUFA8P51970 172 aa21.02■□□□□ 0.96
COL16A1-215ENST00000488897 GSDMDP57764 484 aa21.02■□□□□ 0.96
COL16A1-215ENST00000488897 RRP12Q5JTH9 1297 aaKnown RBP21.02■□□□□ 0.96
COL16A1-215ENST00000488897 SYNE3Q6ZMZ3 975 aa21.02■□□□□ 0.96
COL16A1-215ENST00000488897 HPS5Q9UPZ3 1129 aa21.02■□□□□ 0.96
COL16A1-215ENST00000488897 CLIC4Q9Y696 253 aa21.02■□□□□ 0.96
COL16A1-215ENST00000488897 RRP1BQ14684 758 aaKnown RBP21.02■□□□□ 0.95
COL16A1-215ENST00000488897 MYSM1Q5VVJ2 828 aa21.02■□□□□ 0.95
COL16A1-215ENST00000488897 CEP135Q66GS9 1140 aa21.02■□□□□ 0.95
COL16A1-215ENST00000488897 DNAJC18Q9H819 358 aa21.02■□□□□ 0.95
COL16A1-215ENST00000488897 SCN4AP35499 1836 aa21.01■□□□□ 0.95
COL16A1-215ENST00000488897 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.01■□□□□ 0.95
COL16A1-215ENST00000488897 CCDC69A6NI79 296 aa21.01■□□□□ 0.95
COL16A1-215ENST00000488897 OTUD7BQ6GQQ9 843 aa21.01■□□□□ 0.95
COL16A1-215ENST00000488897 CCDC84Q86UT8 332 aaPredicted RBP21.01■□□□□ 0.95
COL16A1-215ENST00000488897 SULF1Q8IWU6 871 aa21.01■□□□□ 0.95
COL16A1-215ENST00000488897 PKNOX2Q96KN3 472 aa21.01■□□□□ 0.95
COL16A1-215ENST00000488897 TOMM22Q9NS69 142 aa21.01■□□□□ 0.95
COL16A1-215ENST00000488897 FILIP1Q7Z7B0 1213 aa21■□□□□ 0.95
COL16A1-215ENST00000488897 PNMA8AQ86V59 439 aaPredicted RBP21■□□□□ 0.95
COL16A1-215ENST00000488897 ATP8A2Q9NTI2 1148 aa21■□□□□ 0.95
COL16A1-215ENST00000488897 IMPACTQ9P2X3 320 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms