RNA–Protein interactions for RNA: ENST00000482659.2

SHANK2-216, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-216ENST00000482659 USP17L19D6RCP7 530 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 USP17L20D6RJB6 530 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 F5H6K3 240 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 FOXP2O15409 715 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 TLR2O60603 784 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 PRDM1O75626 825 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 SLURP2P0DP57 97 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 FDX1P10109 184 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 EEF2P13639 858 aaKnown RBP5.36□□□□□ -1.55
SHANK2-216ENST00000482659 HMGCS2P54868 508 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 IRX3P78415 501 aaPredicted RBP5.36□□□□□ -1.55
SHANK2-216ENST00000482659 ATP2B2Q01814 1243 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 CTDSPL2Q05D32 466 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 KLRC3Q07444 240 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 USP17L24Q0WX57 530 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 COG2Q14746 738 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 KIF22Q14807 665 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 TAF1CQ15572 869 aaPredicted RBP5.36□□□□□ -1.55
SHANK2-216ENST00000482659 RRP12Q5JTH9 1297 aaKnown RBP5.36□□□□□ -1.55
SHANK2-216ENST00000482659 GADL1Q6ZQY3 521 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 STK11IPQ8N1F8 1099 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 GMCL1P1Q8NEA9 526 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 NCOA7Q8NI08 942 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 CEP95Q96GE4 821 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 PTPN18Q99952 460 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 UBAC1Q9BSL1 405 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 VCPKMTQ9H867 229 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 PRDM10Q9NQV6 1147 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 ZSWIM5Q9P217 1185 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 CLIP2Q9UDT6 1046 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 PNMA2Q9UL42 364 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 STX8Q9UNK0 236 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.36□□□□□ -1.55
SHANK2-216ENST00000482659 RBM8AQ9Y5S9 174 aaKnown RBP5.36□□□□□ -1.55
SHANK2-216ENST00000482659 ARAP2Q8WZ64 1704 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 PAPPA2Q9BXP8 1791 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 SCN9AQ15858 1988 aa5.36□□□□□ -1.55
SHANK2-216ENST00000482659 CACNA1SQ13698 1873 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 MYPNQ86TC9 1320 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 IGKV6D-41A0A0C4DH26 115 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 GPR25O00155 361 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 IGF2BP3O00425 579 aaKnown RBP eCLIP5.35□□□□□ -1.55
SHANK2-216ENST00000482659 WDR46O15213 610 aaKnown RBP5.35□□□□□ -1.55
SHANK2-216ENST00000482659 ATMINO43313 823 aaPredicted RBP5.35□□□□□ -1.55
SHANK2-216ENST00000482659 GNRH1P01148 92 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 CYP21A2P08686 494 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 TOP1P11387 765 aaKnown RBP5.35□□□□□ -1.55
SHANK2-216ENST00000482659 PSMA5P28066 241 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 HOXD10P28358 340 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 GUCY1A2P33402 732 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 MCM5P33992 734 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 NOVP48745 357 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 HAND2P61296 217 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 JAG1P78504 1218 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 SP3Q02447 781 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 PTH1RQ03431 593 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 CRHR2Q13324 411 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 NECTIN1Q15223 517 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 PKN2Q16513 984 aaKnown RBP5.35□□□□□ -1.55
SHANK2-216ENST00000482659 TSGA10IPQ3SY00 556 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 FAM47AQ5JRC9 791 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 GPAT2Q6NUI2 795 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 CATSPERGQ6ZRH7 1159 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 SKAP1Q86WV1 359 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 SIAH1Q8IUQ4 282 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 CCAR1Q8IX12 1150 aaKnown RBP5.35□□□□□ -1.55
SHANK2-216ENST00000482659 FAM43AQ8N2R8 423 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 MB21D1Q8N884 522 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 IL27Q8NEV9 243 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 CHURC1Q8WUH1 139 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 ANKS1AQ92625 1134 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 ERO1AQ96HE7 468 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 TMEM87BQ96K49 555 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 ZSCAN10Q96SZ4 725 aaPredicted RBP5.35□□□□□ -1.55
SHANK2-216ENST00000482659 ZIC5Q96T25 663 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.35□□□□□ -1.55
SHANK2-216ENST00000482659 LSG1Q9H089 658 aaKnown RBP5.35□□□□□ -1.55
SHANK2-216ENST00000482659 EMILIN3Q9NT22 766 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 GTF3C3Q9Y5Q9 886 aa5.35□□□□□ -1.55
SHANK2-216ENST00000482659 SPEF2Q9C093 1822 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 PLIN4Q96Q06 1357 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 A0A1W2PRG0 241 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 B4E1Z4 1266 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 E7EWF7 191 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 SLC27A2O14975 620 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 FOXN1O15353 648 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 RAD21O60216 631 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 FKTNO75072 461 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 KDM4AO75164 1064 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 TBC1D8O95759 1140 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 HSPA8P11142 646 aaKnown RBP5.34□□□□□ -1.55
SHANK2-216ENST00000482659 BMP3P12645 472 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 VCAM1P19320 739 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 HSPA4P34932 840 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 COPB2P35606 906 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 SLC1A4P43007 532 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 LBX1P52954 281 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 ATN1P54259 1190 aaPredicted RBP5.34□□□□□ -1.55
SHANK2-216ENST00000482659 PRMT2P55345 433 aa5.34□□□□□ -1.55
SHANK2-216ENST00000482659 CCNA1P78396 465 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms