RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 C11orf96Q7Z7L8 435 aa5.41□□□□□ -1.54
VPS41-212ENST00000482217 LSRQ86X29 649 aaPredicted RBP5.41□□□□□ -1.54
VPS41-212ENST00000482217 CKAP2LQ8IYA6 745 aa5.41□□□□□ -1.54
VPS41-212ENST00000482217 CCDC146Q8IYE0 955 aa5.41□□□□□ -1.54
VPS41-212ENST00000482217 SLFN12Q8IYM2 578 aa5.41□□□□□ -1.54
VPS41-212ENST00000482217 C19orf47Q8N9M1 422 aaKnown RBP5.41□□□□□ -1.54
VPS41-212ENST00000482217 FBLIM1Q8WUP2 373 aa5.41□□□□□ -1.54
VPS41-212ENST00000482217 ANAPC16Q96DE5 110 aa5.41□□□□□ -1.54
VPS41-212ENST00000482217 NBPF4Q96M43 638 aa5.41□□□□□ -1.54
VPS41-212ENST00000482217 SEMA6CQ9H3T2 930 aa5.41□□□□□ -1.54
VPS41-212ENST00000482217 CNNM2Q9H8M5 875 aa5.41□□□□□ -1.54
VPS41-212ENST00000482217 FBRSQ9HAH7 460 aa5.41□□□□□ -1.54
VPS41-212ENST00000482217 PCMTD2Q9NV79 361 aa5.41□□□□□ -1.54
VPS41-212ENST00000482217 PRKAG3Q9UGI9 489 aa5.41□□□□□ -1.54
VPS41-212ENST00000482217 NOP58Q9Y2X3 529 aaKnown RBP5.41□□□□□ -1.54
VPS41-212ENST00000482217 KIAA1324LA8MWY0 1029 aaPredicted RBP5.4□□□□□ -1.54
VPS41-212ENST00000482217 TNFRSF10CO14798 259 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 LRIG2O94898 1065 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 CST3P01034 146 aaPredicted RBP5.4□□□□□ -1.54
VPS41-212ENST00000482217 NFICP08651 508 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 ETFBP38117 255 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 CASP7P55210 303 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 RHBDL3P58872 404 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 SLBPQ14493 270 aaKnown RBP eCLIP5.4□□□□□ -1.54
VPS41-212ENST00000482217 BMS1Q14692 1282 aaKnown RBP5.4□□□□□ -1.54
VPS41-212ENST00000482217 NKG7Q16617 165 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 HSP90AB2PQ58FF8 381 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 TSHZ1Q6ZSZ6 1077 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 NLRC3Q7RTR2 1065 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 MFSD2AQ8NA29 543 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 FAM13CQ8NE31 585 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 SHKBP1Q8TBC3 707 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 PMFBP1Q8TBY8 1022 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 STAG1Q8WVM7 1258 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 ATG4CQ96DT6 458 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 FOXQ1Q9C009 403 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 IRF2BPLQ9H1B7 796 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 ATG3Q9NT62 314 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 DAGLAQ9Y4D2 1042 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 SLC12A7Q9Y666 1083 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 MRVI1Q9Y6F6 885 aa5.4□□□□□ -1.54
VPS41-212ENST00000482217 PRR19A6NJB7 356 aa5.39□□□□□ -1.55
VPS41-212ENST00000482217 CHURC1-FNTBB4DL54 471 aa5.39□□□□□ -1.55
VPS41-212ENST00000482217 DNAJA2O60884 412 aa5.39□□□□□ -1.55
VPS41-212ENST00000482217 TGFB1P01137 390 aa5.39□□□□□ -1.55
VPS41-212ENST00000482217 NME1P15531 152 aaKnown RBP5.39□□□□□ -1.55
VPS41-212ENST00000482217 GUCY2CP25092 1073 aa5.39□□□□□ -1.55
VPS41-212ENST00000482217 CCNFP41002 786 aa5.39□□□□□ -1.55
VPS41-212ENST00000482217 EVA1CP58658 441 aa5.39□□□□□ -1.55
VPS41-212ENST00000482217 CYP27A1Q02318 531 aa5.39□□□□□ -1.55
VPS41-212ENST00000482217 NFKBIBQ15653 356 aa5.39□□□□□ -1.55
VPS41-212ENST00000482217 C4orf46Q504U0 113 aa5.39□□□□□ -1.55
VPS41-212ENST00000482217 SEZ6L2Q6UXD5 910 aa5.39□□□□□ -1.55
VPS41-212ENST00000482217 UBE3DQ7Z6J8 389 aa5.39□□□□□ -1.55
VPS41-212ENST00000482217 MFSD14AQ96MC6 490 aa5.39□□□□□ -1.55
VPS41-212ENST00000482217 ANTXR1Q9H6X2 564 aa5.39□□□□□ -1.55
VPS41-212ENST00000482217 GNL3LQ9NVN8 582 aaKnown RBP5.39□□□□□ -1.55
VPS41-212ENST00000482217 KLHL3Q9UH77 587 aa5.39□□□□□ -1.55
VPS41-212ENST00000482217 R3HCC1Q9Y3T6 440 aaKnown RBP5.39□□□□□ -1.55
VPS41-212ENST00000482217 COL4A3BPQ9Y5P4 624 aa5.39□□□□□ -1.55
VPS41-212ENST00000482217 WDR64B1ANS9 1081 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 CCER2I3L3R5 266 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 SMAD7O15105 426 aaKnown RBP5.38□□□□□ -1.55
VPS41-212ENST00000482217 KLF4O43474 513 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 RAG1P15918 1043 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 GYS2P54840 703 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 ARSHQ5FYA8 562 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 PRAMEF13Q5VWM6 474 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 ANKS3Q6ZW76 656 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 ARMCX6Q7L4S7 300 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 ZAR1Q86SH2 424 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 FAM169BQ8N8A8 192 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 CYB5D2Q8WUJ1 264 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 CCDC74BQ96LY2 380 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 PSMG3-AS1Q96PY0 264 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 ZSWIM4Q9H7M6 989 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 PCDH12Q9NPG4 1184 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 PIM2Q9P1W9 311 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 LEMD3Q9Y2U8 911 aa5.38□□□□□ -1.55
VPS41-212ENST00000482217 UPK3BL1B0FP48 263 aa5.37□□□□□ -1.55
VPS41-212ENST00000482217 UPK3BL2E5RIL1 263 aa5.37□□□□□ -1.55
VPS41-212ENST00000482217 RGS13O14921 159 aa5.37□□□□□ -1.55
VPS41-212ENST00000482217 WDHD1O75717 1129 aaPredicted RBP5.37□□□□□ -1.55
VPS41-212ENST00000482217 IBSPP21815 317 aaPredicted RBP5.37□□□□□ -1.55
VPS41-212ENST00000482217 SSTR4P31391 388 aa5.37□□□□□ -1.55
VPS41-212ENST00000482217 TBX4P57082 545 aa5.37□□□□□ -1.55
VPS41-212ENST00000482217 RAB33AQ14088 237 aa5.37□□□□□ -1.55
VPS41-212ENST00000482217 ZNF746Q6NUN9 644 aaPredicted RBP5.37□□□□□ -1.55
VPS41-212ENST00000482217 PHACTR4Q8IZ21 702 aa5.37□□□□□ -1.55
VPS41-212ENST00000482217 TBC1D32Q96NH3 1257 aa5.37□□□□□ -1.55
VPS41-212ENST00000482217 OSBPL1AQ9BXW6 950 aa5.37□□□□□ -1.55
VPS41-212ENST00000482217 BRINP2Q9C0B6 783 aa5.37□□□□□ -1.55
VPS41-212ENST00000482217 ACTR10Q9NZ32 417 aa5.37□□□□□ -1.55
VPS41-212ENST00000482217 KAT6BQ8WYB5 2073 aa5.36□□□□□ -1.55
VPS41-212ENST00000482217 A0A1W2PQH9 124 aa5.36□□□□□ -1.55
VPS41-212ENST00000482217 F13BP05160 661 aa5.36□□□□□ -1.55
VPS41-212ENST00000482217 ACRP10323 421 aa5.36□□□□□ -1.55
VPS41-212ENST00000482217 FOSL1P15407 271 aa5.36□□□□□ -1.55
VPS41-212ENST00000482217 SPINK2P20155 84 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms