RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 PLVAPQ9BX97 442 aa9.2□□□□□ -0.94
SEC22A-207ENST00000481965 FOXQ1Q9C009 403 aa9.2□□□□□ -0.94
SEC22A-207ENST00000481965 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.2□□□□□ -0.94
SEC22A-207ENST00000481965 DDX56Q9NY93 547 aaKnown RBP9.2□□□□□ -0.94
SEC22A-207ENST00000481965 MRPS23Q9Y3D9 190 aaKnown RBP9.2□□□□□ -0.94
SEC22A-207ENST00000481965 CCDC163A0A0D9SF12 145 aa9.19□□□□□ -0.94
SEC22A-207ENST00000481965 IRS4O14654 1257 aaPredicted RBP9.19□□□□□ -0.94
SEC22A-207ENST00000481965 RNGTTO60942 597 aaKnown RBP9.19□□□□□ -0.94
SEC22A-207ENST00000481965 GRIA2P42262 883 aa9.19□□□□□ -0.94
SEC22A-207ENST00000481965 PLEKHG6Q3KR16 790 aa9.19□□□□□ -0.94
SEC22A-207ENST00000481965 NBPF12Q5TAG4 269 aaPredicted RBP9.19□□□□□ -0.94
SEC22A-207ENST00000481965 HEATR6Q6AI08 1181 aaKnown RBP9.19□□□□□ -0.94
SEC22A-207ENST00000481965 IGF2-ASQ6U949 168 aa9.19□□□□□ -0.94
SEC22A-207ENST00000481965 ARMCX6Q7L4S7 300 aa9.19□□□□□ -0.94
SEC22A-207ENST00000481965 SMYD4Q8IYR2 804 aaPredicted RBP9.19□□□□□ -0.94
SEC22A-207ENST00000481965 C12orf50Q8NA57 414 aaPredicted RBP9.19□□□□□ -0.94
SEC22A-207ENST00000481965 RRAGCQ9HB90 399 aa9.19□□□□□ -0.94
SEC22A-207ENST00000481965 ZNF451Q9Y4E5 1061 aa9.19□□□□□ -0.94
SEC22A-207ENST00000481965 AGRPO00253 132 aa9.18□□□□□ -0.94
SEC22A-207ENST00000481965 KCNQ2O43526 872 aa9.18□□□□□ -0.94
SEC22A-207ENST00000481965 LRIG2O94898 1065 aa9.18□□□□□ -0.94
SEC22A-207ENST00000481965 RAPGEF3O95398 923 aa9.18□□□□□ -0.94
SEC22A-207ENST00000481965 ANKRD39Q53RE8 183 aa9.18□□□□□ -0.94
SEC22A-207ENST00000481965 LCE2AQ5TA79 106 aaPredicted RBP9.18□□□□□ -0.94
SEC22A-207ENST00000481965 JAMLQ86YT9 394 aa9.18□□□□□ -0.94
SEC22A-207ENST00000481965 CCDC144CPQ8IYA2 1237 aa9.18□□□□□ -0.94
SEC22A-207ENST00000481965 AARSD1Q9BTE6 412 aaKnown RBP9.18□□□□□ -0.94
SEC22A-207ENST00000481965 MRPL18Q9H0U6 180 aaKnown RBP9.18□□□□□ -0.94
SEC22A-207ENST00000481965 PIDD1Q9HB75 910 aa9.18□□□□□ -0.94
SEC22A-207ENST00000481965 CWC22Q9HCG8 908 aaKnown RBP9.18□□□□□ -0.94
SEC22A-207ENST00000481965 TRAV20A0A0B4J274 112 aa9.17□□□□□ -0.94
SEC22A-207ENST00000481965 F8W735 103 aaPredicted RBP9.17□□□□□ -0.94
SEC22A-207ENST00000481965 PLD2O14939 933 aa9.17□□□□□ -0.94
SEC22A-207ENST00000481965 NAT2P11245 290 aa9.17□□□□□ -0.94
SEC22A-207ENST00000481965 HSP90AA2PQ14568 343 aaPredicted RBP9.17□□□□□ -0.94
SEC22A-207ENST00000481965 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.17□□□□□ -0.94
SEC22A-207ENST00000481965 LRRN4CLQ8ND94 238 aa9.17□□□□□ -0.94
SEC22A-207ENST00000481965 RIN3Q8TB24 985 aa9.17□□□□□ -0.94
SEC22A-207ENST00000481965 OSBP2Q969R2 916 aa9.17□□□□□ -0.94
SEC22A-207ENST00000481965 MRGPRX3Q96LB0 322 aa9.17□□□□□ -0.94
SEC22A-207ENST00000481965 ACSS3Q9H6R3 686 aa9.17□□□□□ -0.94
SEC22A-207ENST00000481965 METTL14Q9HCE5 456 aaKnown RBP9.17□□□□□ -0.94
SEC22A-207ENST00000481965 TRBV23-1A0A0A0MS06 115 aa9.16□□□□□ -0.94
SEC22A-207ENST00000481965 SPDYE3A6NKU9 549 aa9.16□□□□□ -0.94
SEC22A-207ENST00000481965 MYCLP1P12525 358 aaPredicted RBP9.16□□□□□ -0.94
SEC22A-207ENST00000481965 CD247P20963 164 aa9.16□□□□□ -0.94
SEC22A-207ENST00000481965 STAT3P40763 770 aa9.16□□□□□ -0.94
SEC22A-207ENST00000481965 PREPP48147 710 aa9.16□□□□□ -0.94
SEC22A-207ENST00000481965 SHISA2Q6UWI4 295 aa9.16□□□□□ -0.94
SEC22A-207ENST00000481965 TMEM130Q8N3G9 435 aa9.16□□□□□ -0.94
SEC22A-207ENST00000481965 MFSD2AQ8NA29 543 aa9.16□□□□□ -0.94
SEC22A-207ENST00000481965 IRF2BPLQ9H1B7 796 aa9.16□□□□□ -0.94
SEC22A-207ENST00000481965 CEP131Q9UPN4 1083 aa9.16□□□□□ -0.94
SEC22A-207ENST00000481965 FAM83GA6ND36 823 aa9.15□□□□□ -0.94
SEC22A-207ENST00000481965 ALX3O95076 343 aa9.15□□□□□ -0.94
SEC22A-207ENST00000481965 ELNP15502 786 aa9.15□□□□□ -0.94
SEC22A-207ENST00000481965 CDKN1CP49918 316 aaPredicted RBP9.15□□□□□ -0.94
SEC22A-207ENST00000481965 FNDC3BQ53EP0 1204 aaKnown RBP9.15□□□□□ -0.94
SEC22A-207ENST00000481965 FDX2Q6P4F2 183 aa9.15□□□□□ -0.94
SEC22A-207ENST00000481965 RNF180Q86T96 592 aa9.15□□□□□ -0.94
SEC22A-207ENST00000481965 SCUBE1Q8IWY4 988 aa9.15□□□□□ -0.94
SEC22A-207ENST00000481965 C7orf61Q8IZ16 206 aa9.15□□□□□ -0.94
SEC22A-207ENST00000481965 NEDD1Q8NHV4 660 aa9.15□□□□□ -0.94
SEC22A-207ENST00000481965 PPP1R14AQ96A00 147 aa9.15□□□□□ -0.94
SEC22A-207ENST00000481965 KREMEN1Q96MU8 473 aa9.15□□□□□ -0.94
SEC22A-207ENST00000481965 PSMG3-AS1Q96PY0 264 aa9.15□□□□□ -0.94
SEC22A-207ENST00000481965 CDC6Q99741 560 aa9.15□□□□□ -0.94
SEC22A-207ENST00000481965 MKRN2Q9H000 416 aaKnown RBP9.15□□□□□ -0.94
SEC22A-207ENST00000481965 SSU72Q9NP77 194 aaKnown RBP9.15□□□□□ -0.94
SEC22A-207ENST00000481965 LRP2BPQ9P2M1 347 aa9.15□□□□□ -0.94
SEC22A-207ENST00000481965 PCOLCE2Q9UKZ9 415 aa9.15□□□□□ -0.94
SEC22A-207ENST00000481965 GSG1L2A8MUP6 293 aa9.14□□□□□ -0.95
SEC22A-207ENST00000481965 ARHGEF15O94989 841 aa9.14□□□□□ -0.95
SEC22A-207ENST00000481965 SLITRK5O94991 958 aa9.14□□□□□ -0.95
SEC22A-207ENST00000481965 C6orf222P0C671 652 aaPredicted RBP9.14□□□□□ -0.95
SEC22A-207ENST00000481965 FGFR1P11362 822 aa9.14□□□□□ -0.95
SEC22A-207ENST00000481965 SDSP20132 328 aa9.14□□□□□ -0.95
SEC22A-207ENST00000481965 AUHQ13825 339 aaKnown RBP9.14□□□□□ -0.95
SEC22A-207ENST00000481965 ANKRD34AQ69YU3 496 aa9.14□□□□□ -0.95
SEC22A-207ENST00000481965 CDPF1Q6NVV7 123 aa9.14□□□□□ -0.95
SEC22A-207ENST00000481965 PRPF38AQ8NAV1 312 aaKnown RBP9.14□□□□□ -0.95
SEC22A-207ENST00000481965 BVESQ8NE79 360 aa9.14□□□□□ -0.95
SEC22A-207ENST00000481965 GP6Q9HCN6 339 aa9.14□□□□□ -0.95
SEC22A-207ENST00000481965 WHRNQ9P202 907 aa9.14□□□□□ -0.95
SEC22A-207ENST00000481965 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.13□□□□□ -0.95
SEC22A-207ENST00000481965 PRODHO43272 600 aa9.13□□□□□ -0.95
SEC22A-207ENST00000481965 PDE8AO60658 829 aa9.13□□□□□ -0.95
SEC22A-207ENST00000481965 PARNO95453 639 aaKnown RBP9.13□□□□□ -0.95
SEC22A-207ENST00000481965 PDGFRBP09619 1106 aa9.13□□□□□ -0.95
SEC22A-207ENST00000481965 PABPC1P11940 636 aaKnown RBP9.13□□□□□ -0.95
SEC22A-207ENST00000481965 EVA1CP58658 441 aa9.13□□□□□ -0.95
SEC22A-207ENST00000481965 TRIM28Q13263 835 aaKnown RBP9.13□□□□□ -0.95
SEC22A-207ENST00000481965 LETMD1Q6P1Q0 360 aa9.13□□□□□ -0.95
SEC22A-207ENST00000481965 Q6ZS46 218 aa9.13□□□□□ -0.95
SEC22A-207ENST00000481965 MIPEPQ99797 713 aa9.13□□□□□ -0.95
SEC22A-207ENST00000481965 EMC9Q9Y3B6 208 aa9.13□□□□□ -0.95
SEC22A-207ENST00000481965 DYNC1LI2O43237 492 aaPredicted RBP9.12□□□□□ -0.95
SEC22A-207ENST00000481965 GRIK4Q16099 956 aa9.12□□□□□ -0.95
SEC22A-207ENST00000481965 NSMFQ6X4W1 530 aa9.12□□□□□ -0.95
SEC22A-207ENST00000481965 ADAT2Q7Z6V5 191 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms