RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 PARP14Q460N5 1801 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 USP17L15C9J2P7 530 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 USP17L13C9JLJ4 530 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 USP17L11C9JVI0 530 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 USP17L18D6R9N7 530 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 USP17L22D6RA61 530 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 USP17L17D6RBQ6 530 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 USP17L19D6RCP7 530 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 USP17L20D6RJB6 530 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 ORC4O43929 436 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 EIF5BO60841 1220 aaKnown RBP14.51□□□□□ -0.09
PTPRF-213ENST00000481019 CAPN15O75808 1086 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 PSMC4P43686 418 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 MFAP1P55081 439 aaKnown RBP14.51□□□□□ -0.09
PTPRF-213ENST00000481019 IRX3P78415 501 aaPredicted RBP14.51□□□□□ -0.09
PTPRF-213ENST00000481019 USP17L24Q0WX57 530 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 PABPC4Q13310 644 aaKnown RBP eCLIP14.51□□□□□ -0.09
PTPRF-213ENST00000481019 Q3C1V9 767 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 BMP2KLQ5H9B9 411 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 RASGRP2Q7LDG7 609 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 LRRC47Q8N1G4 583 aaKnown RBP14.51□□□□□ -0.09
PTPRF-213ENST00000481019 ARHGEF10LQ9HCE6 1279 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 MTMR4Q9NYA4 1195 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 NYAP2Q9P242 653 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 PNMA3Q9UL41 463 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 HPS5Q9UPZ3 1129 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 PTPN22Q9Y2R2 807 aa14.51□□□□□ -0.09
PTPRF-213ENST00000481019 RAD50Q92878 1312 aa14.5□□□□□ -0.09
PTPRF-213ENST00000481019 SPDYE16A6NNV3 312 aaPredicted RBP14.5□□□□□ -0.09
PTPRF-213ENST00000481019 RANBP6O60518 1105 aaKnown RBP14.5□□□□□ -0.09
PTPRF-213ENST00000481019 SLC3A2P08195 630 aaKnown RBP14.5□□□□□ -0.09
PTPRF-213ENST00000481019 TSPY3P0CV98 308 aa14.5□□□□□ -0.09
PTPRF-213ENST00000481019 TSPY8P0CW00 308 aa14.5□□□□□ -0.09
PTPRF-213ENST00000481019 RRP12Q5JTH9 1297 aaKnown RBP14.5□□□□□ -0.09
PTPRF-213ENST00000481019 CHMP4CQ96CF2 233 aa14.5□□□□□ -0.09
PTPRF-213ENST00000481019 BTBD7Q9P203 1132 aa14.5□□□□□ -0.09
PTPRF-213ENST00000481019 MORF4L1Q9UBU8 362 aa14.5□□□□□ -0.09
PTPRF-213ENST00000481019 GABRQQ9UN88 632 aa14.5□□□□□ -0.09
PTPRF-213ENST00000481019 BRCA2P51587 3418 aa14.49□□□□□ -0.09
PTPRF-213ENST00000481019 NDUFB10O96000 172 aa14.49□□□□□ -0.09
PTPRF-213ENST00000481019 FAM110CQ1W6H9 321 aa14.49□□□□□ -0.09
PTPRF-213ENST00000481019 FAM83BQ5T0W9 1011 aa14.49□□□□□ -0.09
PTPRF-213ENST00000481019 AKNAD1Q5T1N1 836 aa14.49□□□□□ -0.09
PTPRF-213ENST00000481019 FBXO46Q6PJ61 603 aaPredicted RBP14.49□□□□□ -0.09
PTPRF-213ENST00000481019 STAG1Q8WVM7 1258 aa14.49□□□□□ -0.09
PTPRF-213ENST00000481019 MKL1Q969V6 931 aa14.49□□□□□ -0.09
PTPRF-213ENST00000481019 PAGR1Q9BTK6 254 aa14.49□□□□□ -0.09
PTPRF-213ENST00000481019 TANGO6Q9C0B7 1094 aa14.49□□□□□ -0.09
PTPRF-213ENST00000481019 ZNF287Q9HBT7 754 aa14.49□□□□□ -0.09
PTPRF-213ENST00000481019 FBXO28Q9NVF7 368 aa14.49□□□□□ -0.09
PTPRF-213ENST00000481019 PTCH2Q9Y6C5 1203 aa14.49□□□□□ -0.09
PTPRF-213ENST00000481019 DOCK3Q8IZD9 2030 aa14.49□□□□□ -0.09
PTPRF-213ENST00000481019 A0A0G2JMZ2 1700 aa14.49□□□□□ -0.09
PTPRF-213ENST00000481019 PLXNB2O15031 1838 aa14.48□□□□□ -0.09
PTPRF-213ENST00000481019 TSPY2A6NKD2 308 aa14.48□□□□□ -0.09
PTPRF-213ENST00000481019 F5H6K3 240 aa14.48□□□□□ -0.09
PTPRF-213ENST00000481019 ZNF213O14771 459 aa14.48□□□□□ -0.09
PTPRF-213ENST00000481019 RAD21O60216 631 aa14.48□□□□□ -0.09
PTPRF-213ENST00000481019 FMNL1O95466 1100 aaPredicted RBP14.48□□□□□ -0.09
PTPRF-213ENST00000481019 GCLCP48506 637 aaPredicted RBP14.48□□□□□ -0.09
PTPRF-213ENST00000481019 NOVP48745 357 aa14.48□□□□□ -0.09
PTPRF-213ENST00000481019 KLRC3Q07444 240 aa14.48□□□□□ -0.09
PTPRF-213ENST00000481019 IFFO2Q5TF58 517 aa14.48□□□□□ -0.09
PTPRF-213ENST00000481019 ESYT1Q9BSJ8 1104 aa14.48□□□□□ -0.09
PTPRF-213ENST00000481019 LSG1Q9H089 658 aaKnown RBP14.48□□□□□ -0.09
PTPRF-213ENST00000481019 PORCNQ9H237 461 aa14.48□□□□□ -0.09
PTPRF-213ENST00000481019 TOMM22Q9NS69 142 aa14.48□□□□□ -0.09
PTPRF-213ENST00000481019 WDR46O15213 610 aaKnown RBP14.47□□□□□ -0.09
PTPRF-213ENST00000481019 TTLL1O95922 423 aa14.47□□□□□ -0.09
PTPRF-213ENST00000481019 ERVK-9P63128 1117 aa14.47□□□□□ -0.09
PTPRF-213ENST00000481019 ERVK-24P63145 666 aa14.47□□□□□ -0.09
PTPRF-213ENST00000481019 PRKCZQ05513 592 aa14.47□□□□□ -0.09
PTPRF-213ENST00000481019 COL9A3Q14050 684 aaPredicted RBP14.47□□□□□ -0.09
PTPRF-213ENST00000481019 KIF22Q14807 665 aa14.47□□□□□ -0.09
PTPRF-213ENST00000481019 PKN2Q16513 984 aaKnown RBP14.47□□□□□ -0.09
PTPRF-213ENST00000481019 MFSD6Q6ZSS7 791 aa14.47□□□□□ -0.09
PTPRF-213ENST00000481019 RUFY2Q8WXA3 655 aa14.47□□□□□ -0.09
PTPRF-213ENST00000481019 LPAR1Q92633 364 aa14.47□□□□□ -0.09
PTPRF-213ENST00000481019 ATG4CQ96DT6 458 aa14.47□□□□□ -0.09
PTPRF-213ENST00000481019 SH2D4AQ9H788 454 aa14.47□□□□□ -0.09
PTPRF-213ENST00000481019 SRRDQ9UH36 339 aa14.47□□□□□ -0.09
PTPRF-213ENST00000481019 CCDC85CA6NKD9 419 aa14.46□□□□□ -0.09
PTPRF-213ENST00000481019 FLOT1O75955 427 aa14.46□□□□□ -0.09
PTPRF-213ENST00000481019 CYP21A2P08686 494 aa14.46□□□□□ -0.09
PTPRF-213ENST00000481019 DSG3P32926 999 aa14.46□□□□□ -0.09
PTPRF-213ENST00000481019 FCGRTP55899 365 aa14.46□□□□□ -0.09
PTPRF-213ENST00000481019 COG2Q14746 738 aa14.46□□□□□ -0.09
PTPRF-213ENST00000481019 RCSD1Q6JBY9 416 aa14.46□□□□□ -0.09
PTPRF-213ENST00000481019 SAMD1Q6SPF0 538 aaPredicted RBP14.46□□□□□ -0.09
PTPRF-213ENST00000481019 LBX2Q6XYB7 198 aa14.46□□□□□ -0.09
PTPRF-213ENST00000481019 STOX1Q6ZVD7 989 aa14.46□□□□□ -0.09
PTPRF-213ENST00000481019 GPRC5AQ8NFJ5 357 aa14.46□□□□□ -0.09
PTPRF-213ENST00000481019 MAP4K1Q92918 833 aa14.46□□□□□ -0.09
PTPRF-213ENST00000481019 ZKSCAN3Q9BRR0 538 aa14.46□□□□□ -0.09
PTPRF-213ENST00000481019 GOPCQ9HD26 462 aa14.46□□□□□ -0.09
PTPRF-213ENST00000481019 COL11A1P12107 1806 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-213ENST00000481019 MYPNQ86TC9 1320 aa14.45□□□□□ -0.1
PTPRF-213ENST00000481019 B4E1Z4 1266 aa14.45□□□□□ -0.1
PTPRF-213ENST00000481019 KDM4AO75164 1064 aa14.45□□□□□ -0.1
PTPRF-213ENST00000481019 IMMTQ16891 758 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms