RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 POLR3DP05423 398 aaPredicted RBP10.81□□□□□ -0.68
VCP-206ENST00000480327 CAPN2P17655 700 aa10.81□□□□□ -0.68
VCP-206ENST00000480327 CYP2B6P20813 491 aa10.81□□□□□ -0.68
VCP-206ENST00000480327 HERVK_113P62684 666 aa10.81□□□□□ -0.68
VCP-206ENST00000480327 NECAB2Q7Z6G3 386 aa10.81□□□□□ -0.68
VCP-206ENST00000480327 C7orf61Q8IZ16 206 aa10.81□□□□□ -0.68
VCP-206ENST00000480327 STK11IPQ8N1F8 1099 aa10.81□□□□□ -0.68
VCP-206ENST00000480327 ANKLE1Q8NAG6 615 aa10.81□□□□□ -0.68
VCP-206ENST00000480327 DDRGK1Q96HY6 314 aa10.81□□□□□ -0.68
VCP-206ENST00000480327 PORCNQ9H237 461 aa10.81□□□□□ -0.68
VCP-206ENST00000480327 DHX36Q9H2U1 1008 aaKnown RBP10.81□□□□□ -0.68
VCP-206ENST00000480327 AS3MTQ9HBK9 375 aa10.81□□□□□ -0.68
VCP-206ENST00000480327 EMILIN3Q9NT22 766 aa10.81□□□□□ -0.68
VCP-206ENST00000480327 OGDHLQ9ULD0 1010 aa10.81□□□□□ -0.68
VCP-206ENST00000480327 ZBTB21Q9ULJ3 1066 aa10.81□□□□□ -0.68
VCP-206ENST00000480327 ZMYND8Q9ULU4 1186 aaPredicted RBP10.81□□□□□ -0.68
VCP-206ENST00000480327 CCDC171Q6TFL3 1326 aa10.81□□□□□ -0.68
VCP-206ENST00000480327 COL11A1P12107 1806 aaPredicted RBP10.8□□□□□ -0.68
VCP-206ENST00000480327 USP17L12C9JPN9 530 aa10.8□□□□□ -0.68
VCP-206ENST00000480327 USP17L21D6R901 530 aa10.8□□□□□ -0.68
VCP-206ENST00000480327 SMIM22K7EJ46 135 aa10.8□□□□□ -0.68
VCP-206ENST00000480327 CNMDO75829 334 aa10.8□□□□□ -0.68
VCP-206ENST00000480327 HLA-DOAP06340 250 aa10.8□□□□□ -0.68
VCP-206ENST00000480327 ASNSP08243 561 aa10.8□□□□□ -0.68
VCP-206ENST00000480327 GNAT2P19087 354 aa10.8□□□□□ -0.68
VCP-206ENST00000480327 TDO2P48775 406 aa10.8□□□□□ -0.68
VCP-206ENST00000480327 PLCD1P51178 756 aa10.8□□□□□ -0.68
VCP-206ENST00000480327 PABPC4Q13310 644 aaKnown RBP eCLIP10.8□□□□□ -0.68
VCP-206ENST00000480327 CCL14Q16627 93 aa10.8□□□□□ -0.68
VCP-206ENST00000480327 TICAM2Q86XR7 235 aa10.8□□□□□ -0.68
VCP-206ENST00000480327 FOXP4Q8IVH2 680 aaPredicted RBP10.8□□□□□ -0.68
VCP-206ENST00000480327 IFNL3Q8IZI9 196 aa10.8□□□□□ -0.68
VCP-206ENST00000480327 RUFY2Q8WXA3 655 aa10.8□□□□□ -0.68
VCP-206ENST00000480327 EPB41L4AQ9HCS5 686 aaPredicted RBP10.8□□□□□ -0.68
VCP-206ENST00000480327 HMX1Q9NP08 348 aaPredicted RBP10.8□□□□□ -0.68
VCP-206ENST00000480327 ATP8A2Q9NTI2 1148 aa10.8□□□□□ -0.68
VCP-206ENST00000480327 ZNF236Q9UL36 1845 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 MINDY4BA8MYZ0 360 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 USP17L10C9JJH3 530 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 FOXP2O15409 715 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 CDC45O75419 566 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 COL6A1P12109 1028 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 XRCC5P13010 732 aaKnown RBP10.79□□□□□ -0.68
VCP-206ENST00000480327 PRKAR2AP13861 404 aaKnown RBP10.79□□□□□ -0.68
VCP-206ENST00000480327 SYN1P17600 705 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 CCND3P30281 292 aaPredicted RBP10.79□□□□□ -0.68
VCP-206ENST00000480327 BMP8BP34820 402 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 ERVK-9P63128 1117 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 ERVK-24P63145 666 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 CACNB2Q08289 660 aaPredicted RBP10.79□□□□□ -0.68
VCP-206ENST00000480327 MORN1Q5T089 497 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 LHX8Q68G74 356 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 CTR9Q6PD62 1173 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 TTC6Q86TZ1 520 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 CRACR2BQ8N4Y2 399 aaPredicted RBP10.79□□□□□ -0.68
VCP-206ENST00000480327 GPRC5AQ8NFJ5 357 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 DYNLL2Q96FJ2 89 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 TRIM34Q9BYJ4 488 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 NACAP1Q9BZK3 213 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 NBPF3Q9H094 633 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 NAPBQ9H115 298 aa10.79□□□□□ -0.68
VCP-206ENST00000480327 C19orf81C9J6K1 198 aa10.78□□□□□ -0.68
VCP-206ENST00000480327 SGSM2O43147 1006 aa10.78□□□□□ -0.68
VCP-206ENST00000480327 HSPD1P10809 573 aaKnown RBP10.78□□□□□ -0.68
VCP-206ENST00000480327 MFAP1P55081 439 aaKnown RBP10.78□□□□□ -0.68
VCP-206ENST00000480327 IRX3P78415 501 aaPredicted RBP10.78□□□□□ -0.68
VCP-206ENST00000480327 TATDN1Q6P1N9 297 aa10.78□□□□□ -0.68
VCP-206ENST00000480327 CASC1Q6TDU7 716 aa10.78□□□□□ -0.68
VCP-206ENST00000480327 GPR142Q7Z601 462 aa10.78□□□□□ -0.68
VCP-206ENST00000480327 AMOTL1Q8IY63 956 aa10.78□□□□□ -0.68
VCP-206ENST00000480327 C12orf42Q96LP6 360 aa10.78□□□□□ -0.68
VCP-206ENST00000480327 ESYT1Q9BSJ8 1104 aa10.78□□□□□ -0.68
VCP-206ENST00000480327 C11orf49Q9H6J7 331 aa10.78□□□□□ -0.68
VCP-206ENST00000480327 FLRT1Q9NZU1 646 aa10.78□□□□□ -0.68
VCP-206ENST00000480327 PLXNA1Q9UIW2 1896 aa10.78□□□□□ -0.68
VCP-206ENST00000480327 CUL9Q8IWT3 2517 aa10.78□□□□□ -0.68
VCP-206ENST00000480327 SMCHD1A6NHR9 2005 aa10.77□□□□□ -0.68
VCP-206ENST00000480327 GH2P01242 217 aa10.77□□□□□ -0.69
VCP-206ENST00000480327 IGHA2P01877 340 aa10.77□□□□□ -0.69
VCP-206ENST00000480327 GUCY1A2P33402 732 aa10.77□□□□□ -0.69
VCP-206ENST00000480327 MAGEA10P43363 369 aaPredicted RBP10.77□□□□□ -0.69
VCP-206ENST00000480327 PTH1RQ03431 593 aa10.77□□□□□ -0.69
VCP-206ENST00000480327 C12orf60Q5U649 245 aa10.77□□□□□ -0.69
VCP-206ENST00000480327 SLC44A5Q8NCS7 719 aa10.77□□□□□ -0.69
VCP-206ENST00000480327 ACER1Q8TDN7 264 aa10.77□□□□□ -0.69
VCP-206ENST00000480327 NUDT12Q9BQG2 462 aa10.77□□□□□ -0.69
VCP-206ENST00000480327 PAGR1Q9BTK6 254 aa10.77□□□□□ -0.69
VCP-206ENST00000480327 GINM1Q9NU53 330 aa10.77□□□□□ -0.69
VCP-206ENST00000480327 TMOD4Q9NZQ9 345 aa10.77□□□□□ -0.69
VCP-206ENST00000480327 ARPP21Q9UBL0 812 aaPredicted RBP10.77□□□□□ -0.69
VCP-206ENST00000480327 RAD50Q92878 1312 aa10.77□□□□□ -0.69
VCP-206ENST00000480327 FGAP02671 866 aa10.76□□□□□ -0.69
VCP-206ENST00000480327 MAPK4P31152 587 aa10.76□□□□□ -0.69
VCP-206ENST00000480327 SHMT1P34896 483 aa10.76□□□□□ -0.69
VCP-206ENST00000480327 HAND2P61296 217 aa10.76□□□□□ -0.69
VCP-206ENST00000480327 CTDSPL2Q05D32 466 aa10.76□□□□□ -0.69
VCP-206ENST00000480327 ZYXQ15942 572 aaKnown RBP10.76□□□□□ -0.69
VCP-206ENST00000480327 LRRC26Q2I0M4 334 aa10.76□□□□□ -0.69
VCP-206ENST00000480327 GIMAP6Q6P9H5 292 aa10.76□□□□□ -0.69
VCP-206ENST00000480327 USP17L2Q6R6M4 530 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 196.4 ms