RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 ARID3AQ99856 593 aa23.59■■□□□ 1.37
TMED4-204ENST00000477639 FAM47AQ5JRC9 791 aa23.58■■□□□ 1.37
TMED4-204ENST00000477639 TPTE2Q6XPS3 522 aa23.58■■□□□ 1.37
TMED4-204ENST00000477639 SH3RF1Q7Z6J0 888 aa23.58■■□□□ 1.37
TMED4-204ENST00000477639 TXNRD3Q86VQ6 643 aa23.58■■□□□ 1.37
TMED4-204ENST00000477639 FERMT2Q96AC1 680 aa23.58■■□□□ 1.37
TMED4-204ENST00000477639 AKT1S1Q96B36 256 aa23.58■■□□□ 1.37
TMED4-204ENST00000477639 ARPP21Q9UBL0 812 aaPredicted RBP23.58■■□□□ 1.37
TMED4-204ENST00000477639 LAMB1P07942 1786 aa23.58■■□□□ 1.37
TMED4-204ENST00000477639 TAF1LQ8IZX4 1826 aa23.58■■□□□ 1.37
TMED4-204ENST00000477639 ZPR1O75312 459 aa23.58■■□□□ 1.36
TMED4-204ENST00000477639 NOM1Q5C9Z4 860 aaKnown RBP23.58■■□□□ 1.36
TMED4-204ENST00000477639 PPP4R3BQ5MIZ7 849 aa23.58■■□□□ 1.36
TMED4-204ENST00000477639 CCDC24Q8N4L8 307 aa23.58■■□□□ 1.36
TMED4-204ENST00000477639 EPSTI1Q96J88 318 aa23.58■■□□□ 1.36
TMED4-204ENST00000477639 BRMS1Q9HCU9 246 aa23.58■■□□□ 1.36
TMED4-204ENST00000477639 MYH13Q9UKX3 1938 aa23.57■■□□□ 1.36
TMED4-204ENST00000477639 MAST2Q6P0Q8 1798 aa23.57■■□□□ 1.36
TMED4-204ENST00000477639 TOP1P11387 765 aaKnown RBP23.57■■□□□ 1.36
TMED4-204ENST00000477639 TBX2Q13207 712 aaPredicted RBP23.57■■□□□ 1.36
TMED4-204ENST00000477639 NAA30Q147X3 362 aaPredicted RBP23.57■■□□□ 1.36
TMED4-204ENST00000477639 CTCFLQ8NI51 663 aaPredicted RBP23.57■■□□□ 1.36
TMED4-204ENST00000477639 NFE2L3Q9Y4A8 694 aa23.57■■□□□ 1.36
TMED4-204ENST00000477639 KIAA1551Q9HCM1 1747 aa23.57■■□□□ 1.36
TMED4-204ENST00000477639 GNPATO15228 680 aa23.56■■□□□ 1.36
TMED4-204ENST00000477639 DHX58Q96C10 678 aa23.56■■□□□ 1.36
TMED4-204ENST00000477639 SLFN14P0C7P3 912 aa23.56■■□□□ 1.36
TMED4-204ENST00000477639 PLCD1P51178 756 aa23.56■■□□□ 1.36
TMED4-204ENST00000477639 ZNF174Q15697 407 aa23.56■■□□□ 1.36
TMED4-204ENST00000477639 TTC38Q5R3I4 469 aa23.56■■□□□ 1.36
TMED4-204ENST00000477639 ERCC5P28715 1186 aaPredicted RBP23.55■■□□□ 1.36
TMED4-204ENST00000477639 RCSD1Q6JBY9 416 aa23.55■■□□□ 1.36
TMED4-204ENST00000477639 SYMPKQ92797 1274 aaKnown RBP23.55■■□□□ 1.36
TMED4-204ENST00000477639 PAGE5Q96GU1 130 aa23.55■■□□□ 1.36
TMED4-204ENST00000477639 TUBB4AP04350 444 aa23.54■■□□□ 1.36
TMED4-204ENST00000477639 SCG2P13521 617 aa23.54■■□□□ 1.36
TMED4-204ENST00000477639 CT47A1Q5JQC4 288 aaPredicted RBP23.54■■□□□ 1.36
TMED4-204ENST00000477639 SPTY2D1Q68D10 685 aaPredicted RBP23.54■■□□□ 1.36
TMED4-204ENST00000477639 AMIGO3Q86WK7 504 aa23.54■■□□□ 1.36
TMED4-204ENST00000477639 ZNF215Q9UL58 517 aaPredicted RBP23.54■■□□□ 1.36
TMED4-204ENST00000477639 ZBTB7AO95365 584 aa23.54■■□□□ 1.36
TMED4-204ENST00000477639 ATP2C1P98194 919 aaPredicted RBP23.54■■□□□ 1.36
TMED4-204ENST00000477639 PTPN21Q16825 1174 aa23.54■■□□□ 1.36
TMED4-204ENST00000477639 PFKFB3Q16875 520 aaPredicted RBP23.54■■□□□ 1.36
TMED4-204ENST00000477639 TMEM139Q8IV31 216 aa23.54■■□□□ 1.36
TMED4-204ENST00000477639 TRMT44Q8IYL2 757 aaKnown RBP23.54■■□□□ 1.36
TMED4-204ENST00000477639 CCP110O43303 1012 aa23.53■■□□□ 1.36
TMED4-204ENST00000477639 PRKCSHP14314 528 aaPredicted RBP23.53■■□□□ 1.36
TMED4-204ENST00000477639 ARHGEF1Q92888 912 aaKnown RBP23.53■■□□□ 1.36
TMED4-204ENST00000477639 MKRN1Q9UHC7 482 aaKnown RBP23.53■■□□□ 1.36
TMED4-204ENST00000477639 GOLGA8FQ08AF8 430 aa23.52■■□□□ 1.36
TMED4-204ENST00000477639 GOLGA8DPQ0D2H9 430 aa23.52■■□□□ 1.36
TMED4-204ENST00000477639 HSP90AA4PQ58FG1 418 aa23.52■■□□□ 1.36
TMED4-204ENST00000477639 CCDC34Q96HJ3 373 aa23.52■■□□□ 1.36
TMED4-204ENST00000477639 L2HGDHQ9H9P8 463 aa23.52■■□□□ 1.36
TMED4-204ENST00000477639 JAG2Q9Y219 1238 aa23.52■■□□□ 1.36
TMED4-204ENST00000477639 RTCBQ9Y3I0 505 aaKnown RBP23.52■■□□□ 1.36
TMED4-204ENST00000477639 TSPY2A6NKD2 308 aa23.52■■□□□ 1.36
TMED4-204ENST00000477639 USP17L8P0C7I0 530 aa23.52■■□□□ 1.36
TMED4-204ENST00000477639 VEGFAP15692 232 aaPredicted RBP23.52■■□□□ 1.36
TMED4-204ENST00000477639 CDK11BP21127 795 aaKnown RBP23.52■■□□□ 1.36
TMED4-204ENST00000477639 PTGDRQ13258 359 aa23.52■■□□□ 1.36
TMED4-204ENST00000477639 FCHSD1Q86WN1 690 aa23.52■■□□□ 1.36
TMED4-204ENST00000477639 ERO1AQ96HE7 468 aa23.52■■□□□ 1.36
TMED4-204ENST00000477639 SAMSN1Q9NSI8 373 aaKnown RBP23.52■■□□□ 1.36
TMED4-204ENST00000477639 MCM9Q9NXL9 1143 aa23.52■■□□□ 1.36
TMED4-204ENST00000477639 CCDC88AQ3V6T2 1871 aa23.51■■□□□ 1.35
TMED4-204ENST00000477639 IGSF3O75054 1194 aa23.51■■□□□ 1.35
TMED4-204ENST00000477639 AFMP43652 599 aa23.51■■□□□ 1.35
TMED4-204ENST00000477639 TRAPPC10P48553 1259 aa23.51■■□□□ 1.35
TMED4-204ENST00000477639 NLRP5P59047 1200 aa23.51■■□□□ 1.35
TMED4-204ENST00000477639 DPYDQ12882 1025 aa23.51■■□□□ 1.35
TMED4-204ENST00000477639 C12orf60Q5U649 245 aa23.51■■□□□ 1.35
TMED4-204ENST00000477639 SYT10Q6XYQ8 523 aa23.51■■□□□ 1.35
TMED4-204ENST00000477639 DZIP1Q86YF9 867 aaKnown RBP23.51■■□□□ 1.35
TMED4-204ENST00000477639 ANKS1AQ92625 1134 aa23.51■■□□□ 1.35
TMED4-204ENST00000477639 ADAMTS3O15072 1205 aa23.51■■□□□ 1.35
TMED4-204ENST00000477639 SLU7O95391 586 aaKnown RBP23.51■■□□□ 1.35
TMED4-204ENST00000477639 REXO1L1PQ8IX06 675 aa23.51■■□□□ 1.35
TMED4-204ENST00000477639 CGNQ9P2M7 1197 aaKnown RBP23.51■■□□□ 1.35
TMED4-204ENST00000477639 TNRC6CQ9HCJ0 1690 aaKnown RBP23.5■■□□□ 1.35
TMED4-204ENST00000477639 CD44P16070 742 aaKnown RBP23.5■■□□□ 1.35
TMED4-204ENST00000477639 NT5C2P49902 561 aa23.5■■□□□ 1.35
TMED4-204ENST00000477639 CUL4BQ13620 913 aa23.5■■□□□ 1.35
TMED4-204ENST00000477639 NR1I3Q14994 352 aa23.5■■□□□ 1.35
TMED4-204ENST00000477639 CCDC93Q567U6 631 aa23.5■■□□□ 1.35
TMED4-204ENST00000477639 SPECC1LQ69YQ0 1117 aa23.5■■□□□ 1.35
TMED4-204ENST00000477639 IL17RBQ9NRM6 502 aa23.5■■□□□ 1.35
TMED4-204ENST00000477639 VWA3AA6NCI4 1184 aa23.49■■□□□ 1.35
TMED4-204ENST00000477639 KIF5BP33176 963 aa23.49■■□□□ 1.35
TMED4-204ENST00000477639 TFAP4Q01664 338 aa23.49■■□□□ 1.35
TMED4-204ENST00000477639 PIK3AP1Q6ZUJ8 805 aa23.49■■□□□ 1.35
TMED4-204ENST00000477639 DGKHQ86XP1 1220 aa23.49■■□□□ 1.35
TMED4-204ENST00000477639 GSDMAQ96QA5 445 aa23.49■■□□□ 1.35
TMED4-204ENST00000477639 ATF5Q9Y2D1 282 aaPredicted RBP23.49■■□□□ 1.35
TMED4-204ENST00000477639 CASP1P29466 404 aa23.49■■□□□ 1.35
TMED4-204ENST00000477639 E2F4Q16254 413 aa23.49■■□□□ 1.35
TMED4-204ENST00000477639 SPATA1Q5VX52 437 aa23.49■■□□□ 1.35
TMED4-204ENST00000477639 WDR66Q8TBY9 1149 aa23.49■■□□□ 1.35
TMED4-204ENST00000477639 SPON1Q9HCB6 807 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms