RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 TEFQ10587 303 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 GLE1Q53GS7 698 aaKnown RBP15.47■□□□□ 0.07
HDAC1-206ENST00000476391 TTC39AQ5SRH9 613 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 KANK3Q6NY19 840 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 MIS18BP1Q6P0N0 1132 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 SPDYE1Q8NFV5 336 aaPredicted RBP15.47■□□□□ 0.07
HDAC1-206ENST00000476391 NSMCE1Q8WV22 266 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 CUL5Q93034 780 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 SLC39A2Q9NP94 309 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 IRAK4Q9NWZ3 460 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 C9orf78Q9NZ63 289 aaPredicted RBP15.47■□□□□ 0.07
HDAC1-206ENST00000476391 SETD1BQ9UPS6 1966 aaKnown RBP15.47■□□□□ 0.07
HDAC1-206ENST00000476391 E7EVH7 732 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 WASLO00401 505 aaPredicted RBP15.47■□□□□ 0.07
HDAC1-206ENST00000476391 PDE2AO00408 941 aaPredicted RBP15.47■□□□□ 0.07
HDAC1-206ENST00000476391 BUB1BO60566 1050 aaPredicted RBP15.47■□□□□ 0.07
HDAC1-206ENST00000476391 ATP6V1G2O95670 118 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 SCTRP47872 440 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 RAB27AP51159 221 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 C2orf54Q08AI8 447 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 KCTD16Q68DU8 428 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 ARMC9Q7Z3E5 817 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 FNBP4Q8N3X1 1017 aaPredicted RBP15.47■□□□□ 0.07
HDAC1-206ENST00000476391 SPATA20Q8TB22 786 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 NOD2Q9HC29 1040 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 TRIM10Q9UDY6 481 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 CORO1CQ9ULV4 474 aaPredicted RBP15.47■□□□□ 0.07
HDAC1-206ENST00000476391 RIPOR2Q9Y4F9 1068 aa15.47■□□□□ 0.07
HDAC1-206ENST00000476391 ERICH2A1L162 156 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 SMNDC1O75940 238 aaKnown RBP eCLIP15.46■□□□□ 0.07
HDAC1-206ENST00000476391 NPM1P06748 294 aaKnown RBP eCLIP15.46■□□□□ 0.07
HDAC1-206ENST00000476391 FESP07332 822 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 GHRP10912 638 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 CCDC122Q5T0U0 273 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 CYB5RLQ6IPT4 315 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 IQCKQ8N0W5 287 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 ARFGAP2Q8N6H7 521 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 DRAXINQ8NBI3 349 aaPredicted RBP15.46■□□□□ 0.07
HDAC1-206ENST00000476391 AIDAQ96BJ3 306 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 EDC3Q96F86 508 aaKnown RBP15.46■□□□□ 0.07
HDAC1-206ENST00000476391 PAIP2Q9BPZ3 127 aaKnown RBP15.46■□□□□ 0.07
HDAC1-206ENST00000476391 TMX4Q9H1E5 349 aaPredicted RBP15.46■□□□□ 0.07
HDAC1-206ENST00000476391 C15orf41Q9Y2V0 281 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 TMEM131LA2VDJ0 1609 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 HMGB1P1B2RPK0 211 aaPredicted RBP15.46■□□□□ 0.07
HDAC1-206ENST00000476391 KRT86O43790 486 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 AHCYL1O43865 530 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 CAND2O75155 1236 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 KRT14P02533 472 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 HOXB7P09629 217 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 ZNF827Q17R98 1081 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 ACCSLQ4AC99 568 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 OSBPL9Q96SU4 736 aa15.46■□□□□ 0.07
HDAC1-206ENST00000476391 NUP88Q99567 741 aaPredicted RBP15.46■□□□□ 0.07
HDAC1-206ENST00000476391 RIPK1Q13546 671 aa15.45■□□□□ 0.06
HDAC1-206ENST00000476391 VPS37DQ86XT2 251 aa15.45■□□□□ 0.06
HDAC1-206ENST00000476391 KRI1Q8N9T8 703 aaKnown RBP15.45■□□□□ 0.06
HDAC1-206ENST00000476391 THOC1Q96FV9 657 aaKnown RBP15.45■□□□□ 0.06
HDAC1-206ENST00000476391 ACSBG1Q96GR2 724 aa15.45■□□□□ 0.06
HDAC1-206ENST00000476391 DMGDHQ9UI17 866 aaKnown RBP15.45■□□□□ 0.06
HDAC1-206ENST00000476391 CCDC61Q9Y6R9 512 aa15.45■□□□□ 0.06
HDAC1-206ENST00000476391 SYNRGQ9UMZ2 1314 aa15.45■□□□□ 0.06
HDAC1-206ENST00000476391 CPLX1O14810 134 aa15.45■□□□□ 0.06
HDAC1-206ENST00000476391 NEFHP12036 1026 aa15.45■□□□□ 0.06
HDAC1-206ENST00000476391 KRT9P35527 623 aa15.45■□□□□ 0.06
HDAC1-206ENST00000476391 HDGFP51858 240 aaKnown RBP15.45■□□□□ 0.06
HDAC1-206ENST00000476391 KRT83P78385 493 aa15.45■□□□□ 0.06
HDAC1-206ENST00000476391 CFAP58Q5T655 872 aa15.45■□□□□ 0.06
HDAC1-206ENST00000476391 LRRC1Q9BTT6 524 aa15.45■□□□□ 0.06
HDAC1-206ENST00000476391 NALCNQ8IZF0 1738 aa15.44■□□□□ 0.06
HDAC1-206ENST00000476391 FMN2Q9NZ56 1722 aa15.44■□□□□ 0.06
HDAC1-206ENST00000476391 GMNCA6NCL1 334 aa15.44■□□□□ 0.06
HDAC1-206ENST00000476391 ENO4A6NNW6 628 aa15.44■□□□□ 0.06
HDAC1-206ENST00000476391 A1BGP04217 495 aa15.44■□□□□ 0.06
HDAC1-206ENST00000476391 ELF3P78545 371 aaPredicted RBP15.44■□□□□ 0.06
HDAC1-206ENST00000476391 TRIM58Q8NG06 486 aa15.44■□□□□ 0.06
HDAC1-206ENST00000476391 ATP6V1G3Q96LB4 118 aa15.44■□□□□ 0.06
HDAC1-206ENST00000476391 KDM4CQ9H3R0 1056 aa15.44■□□□□ 0.06
HDAC1-206ENST00000476391 GJB4Q9NTQ9 266 aa15.44■□□□□ 0.06
HDAC1-206ENST00000476391 STIM2Q9P246 746 aa15.44■□□□□ 0.06
HDAC1-206ENST00000476391 LRRC10BA6NIK2 292 aa15.44■□□□□ 0.06
HDAC1-206ENST00000476391 MYO1EQ12965 1108 aa15.44■□□□□ 0.06
HDAC1-206ENST00000476391 ITGB3BPQ13352 177 aaPredicted RBP15.44■□□□□ 0.06
HDAC1-206ENST00000476391 MSL1Q68DK7 614 aa15.44■□□□□ 0.06
HDAC1-206ENST00000476391 SENP3Q9H4L4 574 aaPredicted RBP15.44■□□□□ 0.06
HDAC1-206ENST00000476391 ZBTB12Q9Y330 459 aaPredicted RBP15.44■□□□□ 0.06
HDAC1-206ENST00000476391 UBN2Q6ZU65 1347 aa15.44■□□□□ 0.06
HDAC1-206ENST00000476391 C5orf60A6NFR6 353 aa15.43■□□□□ 0.06
HDAC1-206ENST00000476391 ZNF233A6NK53 670 aa15.43■□□□□ 0.06
HDAC1-206ENST00000476391 ZNF185O15231 689 aa15.43■□□□□ 0.06
HDAC1-206ENST00000476391 VAV2P52735 878 aa15.43■□□□□ 0.06
HDAC1-206ENST00000476391 CUL4BQ13620 913 aa15.43■□□□□ 0.06
HDAC1-206ENST00000476391 SPRED3Q2MJR0 410 aa15.43■□□□□ 0.06
HDAC1-206ENST00000476391 MREGQ8N565 214 aa15.43■□□□□ 0.06
HDAC1-206ENST00000476391 HDAC7Q8WUI4 952 aa15.43■□□□□ 0.06
HDAC1-206ENST00000476391 NUDT16Q96DE0 195 aaKnown RBP15.43■□□□□ 0.06
HDAC1-206ENST00000476391 NUP58Q9BVL2 599 aa15.43■□□□□ 0.06
HDAC1-206ENST00000476391 HELLSQ9NRZ9 838 aa15.43■□□□□ 0.06
HDAC1-206ENST00000476391 OPLAHO14841 1288 aa15.43■□□□□ 0.06
HDAC1-206ENST00000476391 RTN3O95197 1032 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms