RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 C4AP0C0L4 1744 aa11.84□□□□□ -0.51
ABCF1-205ENST00000475993 C4BP0C0L5 1744 aa11.84□□□□□ -0.51
ABCF1-205ENST00000475993 SRGAP2O75044 1071 aa11.84□□□□□ -0.51
ABCF1-205ENST00000475993 PROSER3Q2NL68 480 aa11.84□□□□□ -0.51
ABCF1-205ENST00000475993 CEP85LQ5SZL2 805 aa11.84□□□□□ -0.51
ABCF1-205ENST00000475993 CCDC13Q8IYE1 715 aa11.84□□□□□ -0.51
ABCF1-205ENST00000475993 KRI1Q8N9T8 703 aaKnown RBP11.84□□□□□ -0.51
ABCF1-205ENST00000475993 MAGEC3Q8TD91 643 aa11.84□□□□□ -0.51
ABCF1-205ENST00000475993 HAUS4Q9H6D7 363 aa11.84□□□□□ -0.51
ABCF1-205ENST00000475993 COPRSQ9NQ92 184 aa11.84□□□□□ -0.51
ABCF1-205ENST00000475993 CHCHD3Q9NX63 227 aaKnown RBP11.84□□□□□ -0.51
ABCF1-205ENST00000475993 TRIM10Q9UDY6 481 aa11.84□□□□□ -0.51
ABCF1-205ENST00000475993 GUCA1BQ9UMX6 200 aa11.84□□□□□ -0.51
ABCF1-205ENST00000475993 DDX60Q8IY21 1712 aaKnown RBP11.84□□□□□ -0.51
ABCF1-205ENST00000475993 PDCD2Q16342 344 aaPredicted RBP11.84□□□□□ -0.51
ABCF1-205ENST00000475993 FILIP1LQ4L180 1135 aa11.84□□□□□ -0.51
ABCF1-205ENST00000475993 NAA35Q5VZE5 725 aa11.84□□□□□ -0.51
ABCF1-205ENST00000475993 DRAXINQ8NBI3 349 aaPredicted RBP11.84□□□□□ -0.51
ABCF1-205ENST00000475993 RUBCNQ92622 972 aa11.84□□□□□ -0.51
ABCF1-205ENST00000475993 SAAL1Q96ER3 474 aa11.84□□□□□ -0.51
ABCF1-205ENST00000475993 DBNDD2Q9BQY9 259 aa11.84□□□□□ -0.51
ABCF1-205ENST00000475993 RNF225M0QZC1 329 aaPredicted RBP11.83□□□□□ -0.52
ABCF1-205ENST00000475993 RPSAP08865 295 aaKnown RBP11.83□□□□□ -0.52
ABCF1-205ENST00000475993 TFCP2Q12800 502 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 DRP2Q13474 957 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 CUL4BQ13620 913 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 KRT40Q6A162 431 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 SND1Q7KZF4 910 aaKnown RBP eCLIP11.83□□□□□ -0.52
ABCF1-205ENST00000475993 ARL8AQ96BM9 186 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 AIFM3Q96NN9 605 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 ALG1Q9BT22 464 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 EPN3Q9H201 632 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 SLC40A1Q9NP59 571 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 SEC31BQ9NQW1 1179 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 DDX20Q9UHI6 824 aaKnown RBP11.83□□□□□ -0.52
ABCF1-205ENST00000475993 SERTAD1Q9UHV2 236 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 WDR17Q8IZU2 1322 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 USP4Q13107 963 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 KCNB1Q14721 858 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 SPECC1Q5M775 1068 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 EMC10Q5UCC4 262 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 ALS2CLQ60I27 953 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 STK11IPQ8N1F8 1099 aa11.83□□□□□ -0.52
ABCF1-205ENST00000475993 RRP36Q96EU6 259 aaKnown RBP11.83□□□□□ -0.52
ABCF1-205ENST00000475993 PDE2AO00408 941 aaPredicted RBP11.82□□□□□ -0.52
ABCF1-205ENST00000475993 POLR2DO15514 142 aaKnown RBP11.82□□□□□ -0.52
ABCF1-205ENST00000475993 NDUFA10O95299 355 aa11.82□□□□□ -0.52
ABCF1-205ENST00000475993 POLD1P28340 1107 aa11.82□□□□□ -0.52
ABCF1-205ENST00000475993 LSP1P33241 339 aa11.82□□□□□ -0.52
ABCF1-205ENST00000475993 RAB27AP51159 221 aa11.82□□□□□ -0.52
ABCF1-205ENST00000475993 TLDC1Q6P9B6 456 aa11.82□□□□□ -0.52
ABCF1-205ENST00000475993 MB21D2Q8IYB1 491 aaPredicted RBP11.82□□□□□ -0.52
ABCF1-205ENST00000475993 JAKMIP2Q96AA8 810 aa11.82□□□□□ -0.52
ABCF1-205ENST00000475993 CAPZA3Q96KX2 299 aa11.82□□□□□ -0.52
ABCF1-205ENST00000475993 LMCD1Q9NZU5 365 aa11.82□□□□□ -0.52
ABCF1-205ENST00000475993 EPN1Q9Y6I3 576 aaPredicted RBP11.82□□□□□ -0.52
ABCF1-205ENST00000475993 SYNRGQ9UMZ2 1314 aa11.82□□□□□ -0.52
ABCF1-205ENST00000475993 PRC1O43663 620 aa11.82□□□□□ -0.52
ABCF1-205ENST00000475993 HHATQ5VTY9 493 aa11.82□□□□□ -0.52
ABCF1-205ENST00000475993 FAM228AQ86W67 206 aa11.82□□□□□ -0.52
ABCF1-205ENST00000475993 GRAMD1CQ8IYS0 662 aa11.82□□□□□ -0.52
ABCF1-205ENST00000475993 ZNF473Q8WTR7 871 aaKnown RBP11.82□□□□□ -0.52
ABCF1-205ENST00000475993 MAST3O60307 1309 aa11.82□□□□□ -0.52
ABCF1-205ENST00000475993 ACTN4O43707 911 aaKnown RBP11.81□□□□□ -0.52
ABCF1-205ENST00000475993 RAPGEF3O95398 923 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 RFX5P48382 616 aaPredicted RBP11.81□□□□□ -0.52
ABCF1-205ENST00000475993 TRIM14Q14142 442 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 SNCBQ16143 134 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 EPHA10Q5JZY3 1008 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 THEMIS2Q5TEJ8 643 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 KANK3Q6NY19 840 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 C6orf89Q6UWU4 347 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 KDM7AQ6ZMT4 941 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 ZNF662Q6ZS27 426 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 RAB11FIP4Q86YS3 637 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 CCDC50Q8IVM0 306 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 LGR6Q9HBX8 967 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
ABCF1-205ENST00000475993 GBP2P32456 591 aaPredicted RBP11.81□□□□□ -0.52
ABCF1-205ENST00000475993 CDR1P51861 262 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 ANTXR2P58335 489 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 MMGT1Q8N4V1 131 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 CHP1Q99653 195 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 LRRC10BA6NIK2 292 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 PPP1R12BO60237 982 aaPredicted RBP11.81□□□□□ -0.52
ABCF1-205ENST00000475993 IGKV5-2P06315 115 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 PTPREP23469 700 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 CDC25AP30304 524 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 PTPN12Q05209 780 aaKnown RBP11.81□□□□□ -0.52
ABCF1-205ENST00000475993 GRIN1Q05586 938 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 IQCEQ6IPM2 695 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 PARP9Q8IXQ6 854 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 TSEN2Q8NCE0 465 aaKnown RBP11.81□□□□□ -0.52
ABCF1-205ENST00000475993 NUP88Q99567 741 aaPredicted RBP11.81□□□□□ -0.52
ABCF1-205ENST00000475993 ATP6V0A4Q9HBG4 840 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 PAG1Q9NWQ8 432 aa11.81□□□□□ -0.52
ABCF1-205ENST00000475993 FBXO2Q9UK22 296 aaPredicted RBP11.81□□□□□ -0.52
ABCF1-205ENST00000475993 MST1RQ04912 1400 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 ANO9A1A5B4 782 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 A1BGP04217 495 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms