RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 PPRC1Q5VV67 1664 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-215ENST00000475319 POGZQ7Z3K3 1410 aa6.9□□□□□ -1.3
ECHDC1-215ENST00000475319 CNTLNQ9NXG0 1405 aa6.9□□□□□ -1.3
ECHDC1-215ENST00000475319 KDRP35968 1356 aa6.9□□□□□ -1.3
ECHDC1-215ENST00000475319 KIF2AO00139 706 aaPredicted RBP6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 EREGO14944 169 aa6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 KIF4AO95239 1232 aa6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 CCDC175P0C221 793 aa6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 NBPF7P0C2Y1 421 aaPredicted RBP6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 XRCC5P13010 732 aaKnown RBP6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 HSD3B2P26439 372 aa6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 ELF1P32519 619 aa6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 PHKA2P46019 1235 aa6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 ACBD5Q5T8D3 534 aaPredicted RBP6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 ANKRD13BQ86YJ7 626 aa6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 MYLK4Q86YV6 388 aaPredicted RBP6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 GALNT12Q8IXK2 581 aa6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 BHMTQ93088 406 aa6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 PLEKHG4BQ96PX9 1271 aa6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 FMNL2Q96PY5 1086 aa6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 INSM2Q96T92 566 aaPredicted RBP6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 TRIM56Q9BRZ2 755 aaKnown RBP6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 NOC4LQ9BVI4 516 aaKnown RBP6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 RWDD1Q9H446 243 aaPredicted RBP6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 ZDHHC3Q9NYG2 299 aa6.9□□□□□ -1.31
ECHDC1-215ENST00000475319 USP19O94966 1318 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 SOS1Q07889 1333 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 ABCA8O94911 1581 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 HECW2Q9P2P5 1572 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 NCOA3Q9Y6Q9 1424 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 SMTNL1A8MU46 457 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 SHISA8B8ZZ34 492 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 H7C1W4 665 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 RAB11FIP3O75154 756 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 PPFIA4O75335 1185 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 PECAM1P16284 738 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 EIF5P55010 431 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 TBC1D8BQ0IIM8 1120 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 CCDC15Q0P6D6 951 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 TBC1D10BQ4KMP7 808 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 NKAPLQ5M9Q1 402 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 NUTM2GQ5VZR2 741 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 C16orf87Q6PH81 154 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 CLEC17AQ6ZS10 378 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 BTLAQ7Z6A9 289 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 SDCCAG8Q86SQ7 713 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 ERC1Q8IUD2 1116 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 ANKRD18AQ8IVF6 992 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 C1orf127Q8N9H9 656 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 MIPOL1Q8TD10 442 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 ZNF483Q8TF39 744 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 RSRP1Q9BUV0 290 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 TRPV5Q9NQA5 729 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 TMOD4Q9NZQ9 345 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 CNTN3Q9P232 1028 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 LRRFIP2Q9Y608 721 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 NEO1Q92859 1461 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 ARAP3Q8WWN8 1544 aa6.89□□□□□ -1.31
ECHDC1-215ENST00000475319 ROCK2O75116 1388 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 SHTN1A0MZ66 631 aa6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 MINDY4BA8MYZ0 360 aa6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 HMMRO75330 724 aa6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 GSTT1P30711 240 aa6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 ETFBP38117 255 aa6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 CLEC4GQ6UXB4 293 aa6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 GBP6Q6ZN66 633 aa6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 BICDL1Q6ZP65 573 aa6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 OTUD6AQ7L8S5 288 aa6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 MICALL1Q8N3F8 863 aa6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 MORC4Q8TE76 937 aa6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 FBXO41Q8TF61 875 aa6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 KCNB2Q92953 911 aa6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 THOC1Q96FV9 657 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 BAG1Q99933 345 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 UNC45AQ9H3U1 944 aa6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 EFR3BQ9Y2G0 817 aa6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 COL17A1Q9UMD9 1497 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-215ENST00000475319 PRXQ9BXM0 1461 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 NLRP1Q9C000 1473 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 hCG_2014768A0A024R1R8 64 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 U2SURPO15042 1029 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 CBFA2T2O43439 604 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 ATP8B1O43520 1251 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 TATP17735 454 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 CHMLP26374 656 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 GRNP28799 593 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 CCDC85BQ15834 202 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 DBN1Q16643 649 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 CCDC73Q6ZRK6 1079 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 ANKS3Q6ZW76 656 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 KIAA1328Q86T90 577 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 TRIM42Q8IWZ5 723 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 GLIS3Q8NEA6 775 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 MICAL1Q8TDZ2 1067 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 HDAC7Q8WUI4 952 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 EDARADDQ8WWZ3 215 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 SNX21Q969T3 373 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 EVI5LQ96CN4 794 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms