RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 GDAQ9Y2T3 454 aa12.17□□□□□ -0.46
LSS-208ENST00000474319 MATR3P43243 847 aaKnown RBP eCLIP12.17□□□□□ -0.46
LSS-208ENST00000474319 TTF1Q15361 905 aaPredicted RBP12.17□□□□□ -0.46
LSS-208ENST00000474319 PNKPQ96T60 521 aa12.17□□□□□ -0.46
LSS-208ENST00000474319 POLD4Q9HCU8 107 aa12.17□□□□□ -0.46
LSS-208ENST00000474319 SLC5A1P13866 664 aa12.17□□□□□ -0.46
LSS-208ENST00000474319 BARGINQ6ZT62 677 aa12.17□□□□□ -0.46
LSS-208ENST00000474319 CRACR2BQ8N4Y2 399 aaPredicted RBP12.17□□□□□ -0.46
LSS-208ENST00000474319 PHLPP1O60346 1717 aa12.16□□□□□ -0.46
LSS-208ENST00000474319 CAMTA2O94983 1202 aa12.16□□□□□ -0.46
LSS-208ENST00000474319 PTPREP23469 700 aa12.16□□□□□ -0.46
LSS-208ENST00000474319 PTGDRQ13258 359 aa12.16□□□□□ -0.46
LSS-208ENST00000474319 PUM3Q15397 648 aaKnown RBP12.16□□□□□ -0.46
LSS-208ENST00000474319 CCDC152Q4G0S7 254 aa12.16□□□□□ -0.46
LSS-208ENST00000474319 SHISA4Q96DD7 197 aa12.16□□□□□ -0.46
LSS-208ENST00000474319 MRFAP1Q9Y605 127 aa12.16□□□□□ -0.46
LSS-208ENST00000474319 AFDNP55196 1824 aaKnown RBP12.16□□□□□ -0.46
LSS-208ENST00000474319 NLRP5P59047 1200 aa12.16□□□□□ -0.46
LSS-208ENST00000474319 IFIT1BQ5T764 474 aaKnown RBP12.16□□□□□ -0.46
LSS-208ENST00000474319 CHP1Q99653 195 aa12.16□□□□□ -0.46
LSS-208ENST00000474319 LRRC4BQ9NT99 713 aa12.16□□□□□ -0.46
LSS-208ENST00000474319 LMO7Q8WWI1 1683 aa12.16□□□□□ -0.46
LSS-208ENST00000474319 PPARAQ07869 468 aa12.16□□□□□ -0.46
LSS-208ENST00000474319 CUL4BQ13620 913 aa12.16□□□□□ -0.46
LSS-208ENST00000474319 RILPL1Q5EBL4 403 aa12.16□□□□□ -0.46
LSS-208ENST00000474319 FNBP4Q8N3X1 1017 aaPredicted RBP12.16□□□□□ -0.46
LSS-208ENST00000474319 PAGE5Q96GU1 130 aa12.16□□□□□ -0.46
LSS-208ENST00000474319 NLRP3Q96P20 1036 aa12.16□□□□□ -0.46
LSS-208ENST00000474319 ABCB6Q9NP58 842 aa12.16□□□□□ -0.46
LSS-208ENST00000474319 USP54Q70EL1 1684 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 ZRANB2O95218 330 aaKnown RBP eCLIP12.15□□□□□ -0.464e-7■□□□□ 8.6
LSS-208ENST00000474319 CYP2D6P10635 497 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 IFNAR1P17181 557 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 MDM2Q00987 491 aaPredicted RBP12.15□□□□□ -0.46
LSS-208ENST00000474319 UBE3CQ15386 1083 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 FILIP1LQ4L180 1135 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 MLKLQ8NB16 471 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 NOA1Q8NC60 698 aaKnown RBP12.15□□□□□ -0.46
LSS-208ENST00000474319 CELF1Q92879 486 aaKnown RBP12.15□□□□□ -0.46
LSS-208ENST00000474319 LCMT1Q9UIC8 334 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 LAMA4Q16363 1823 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 ACTN4O43707 911 aaKnown RBP12.15□□□□□ -0.46
LSS-208ENST00000474319 STX10O60499 249 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 DEXIO95424 95 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 CYP2C19P33261 490 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 KRT9P35527 623 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 PLCD1P51178 756 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 MAP3K9P80192 1104 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 UBXN1Q04323 297 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 ENOX2Q16206 610 aaKnown RBP12.15□□□□□ -0.46
LSS-208ENST00000474319 FOXR1Q6PIV2 292 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 ANKRD18AQ8IVF6 992 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 RIN2Q8WYP3 895 aaPredicted RBP12.15□□□□□ -0.46
LSS-208ENST00000474319 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.15□□□□□ -0.46
LSS-208ENST00000474319 FAN1Q9Y2M0 1017 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 ADGRG1Q9Y653 693 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 COL18A1P39060 1754 aa12.15□□□□□ -0.46
LSS-208ENST00000474319 TPM1P09493 284 aa12.15□□□□□ -0.47
LSS-208ENST00000474319 MORC3Q14149 939 aa12.15□□□□□ -0.47
LSS-208ENST00000474319 DNAJC21Q5F1R6 531 aaKnown RBP12.15□□□□□ -0.47
LSS-208ENST00000474319 CERS3Q8IU89 383 aa12.15□□□□□ -0.47
LSS-208ENST00000474319 LPIN2Q92539 896 aa12.15□□□□□ -0.47
LSS-208ENST00000474319 WASF1Q92558 559 aa12.15□□□□□ -0.47
LSS-208ENST00000474319 KIFC2Q96AC6 838 aa12.15□□□□□ -0.47
LSS-208ENST00000474319 CALCOCO1Q9P1Z2 691 aa12.15□□□□□ -0.47
LSS-208ENST00000474319 DACH1Q9UI36 760 aa12.15□□□□□ -0.47
LSS-208ENST00000474319 LTBP4Q8N2S1 1624 aa12.14□□□□□ -0.47
LSS-208ENST00000474319 CAPN2P17655 700 aa12.14□□□□□ -0.47
LSS-208ENST00000474319 KRT23Q9C075 422 aa12.14□□□□□ -0.47
LSS-208ENST00000474319 AATFQ9NY61 560 aaKnown RBP eCLIP12.14□□□□□ -0.47
LSS-208ENST00000474319 TNS2Q63HR2 1409 aa12.14□□□□□ -0.47
LSS-208ENST00000474319 BCL9LQ86UU0 1499 aa12.14□□□□□ -0.47
LSS-208ENST00000474319 TCRBV5S4A2TA0A5A2 114 aa12.14□□□□□ -0.47
LSS-208ENST00000474319 MACROD2A1Z1Q3 448 aa12.14□□□□□ -0.47
LSS-208ENST00000474319 CSF1RP07333 972 aa12.14□□□□□ -0.47
LSS-208ENST00000474319 VSNL1P62760 191 aa12.14□□□□□ -0.47
LSS-208ENST00000474319 ZSCAN26Q16670 478 aa12.14□□□□□ -0.47
LSS-208ENST00000474319 RASGRP2Q7LDG7 609 aa12.14□□□□□ -0.47
LSS-208ENST00000474319 RIC1Q4ADV7 1423 aa12.13□□□□□ -0.47
LSS-208ENST00000474319 USP17L12C9JPN9 530 aa12.13□□□□□ -0.47
LSS-208ENST00000474319 USP17L21D6R901 530 aa12.13□□□□□ -0.47
LSS-208ENST00000474319 KRT2P35908 639 aa12.13□□□□□ -0.47
LSS-208ENST00000474319 RAD51AP2Q09MP3 1159 aa12.13□□□□□ -0.47
LSS-208ENST00000474319 TPTE2Q6XPS3 522 aa12.13□□□□□ -0.47
LSS-208ENST00000474319 CAGE1Q8TC20 777 aa12.13□□□□□ -0.47
LSS-208ENST00000474319 ENOX1Q8TC92 643 aaKnown RBP12.13□□□□□ -0.47
LSS-208ENST00000474319 HPS3Q969F9 1004 aa12.13□□□□□ -0.47
LSS-208ENST00000474319 ADAM21Q9UKJ8 722 aa12.13□□□□□ -0.47
LSS-208ENST00000474319 CTAGE9A4FU28 777 aa12.13□□□□□ -0.47
LSS-208ENST00000474319 GYPCP04921 128 aa12.13□□□□□ -0.47
LSS-208ENST00000474319 CYP27A1Q02318 531 aa12.13□□□□□ -0.47
LSS-208ENST00000474319 NR1I3Q14994 352 aa12.13□□□□□ -0.47
LSS-208ENST00000474319 KRT31Q15323 416 aa12.13□□□□□ -0.47
LSS-208ENST00000474319 TTC19Q6DKK2 380 aaPredicted RBP12.13□□□□□ -0.47
LSS-208ENST00000474319 GPR161Q8N6U8 529 aaKnown RBP12.13□□□□□ -0.47
LSS-208ENST00000474319 ENAHQ8N8S7 591 aaPredicted RBP12.13□□□□□ -0.47
LSS-208ENST00000474319 VAT1LQ9HCJ6 419 aa12.13□□□□□ -0.47
LSS-208ENST00000474319 MRC1P22897 1456 aa12.13□□□□□ -0.47
LSS-208ENST00000474319 MAGEB6P1A0A0J9YX57 407 aa12.13□□□□□ -0.47
LSS-208ENST00000474319 UQCRFS1P1P0C7P4 283 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms