RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 RALYLQ86SE5 291 aaKnown RBP15.63■□□□□ 0.09
BRAT1-205ENST00000473879 SNX21Q969T3 373 aa15.63■□□□□ 0.09
BRAT1-205ENST00000473879 CNNM2Q9H8M5 875 aa15.63■□□□□ 0.09
BRAT1-205ENST00000473879 TMOD4Q9NZQ9 345 aa15.63■□□□□ 0.09
BRAT1-205ENST00000473879 MINDY4BA8MYZ0 360 aa15.62■□□□□ 0.09
BRAT1-205ENST00000473879 OSBPP22059 807 aa15.62■□□□□ 0.09
BRAT1-205ENST00000473879 GUCY1A2P33402 732 aa15.62■□□□□ 0.09
BRAT1-205ENST00000473879 MCM2P49736 904 aa15.62■□□□□ 0.09
BRAT1-205ENST00000473879 NCOA7Q8NI08 942 aa15.62■□□□□ 0.09
BRAT1-205ENST00000473879 STAG1Q8WVM7 1258 aa15.62■□□□□ 0.09
BRAT1-205ENST00000473879 UPF3BQ9BZI7 483 aaKnown RBP15.62■□□□□ 0.09
BRAT1-205ENST00000473879 ARHGAP39Q9C0H5 1083 aa15.62■□□□□ 0.09
BRAT1-205ENST00000473879 DAXXQ9UER7 740 aaPredicted RBP15.62■□□□□ 0.09
BRAT1-205ENST00000473879 TAF6LQ9Y6J9 622 aa15.62■□□□□ 0.09
BRAT1-205ENST00000473879 PLIN4Q96Q06 1357 aa15.62■□□□□ 0.09
BRAT1-205ENST00000473879 RPS6KB1P23443 525 aa15.61■□□□□ 0.09
BRAT1-205ENST00000473879 HOXA7P31268 230 aaPredicted RBP15.61■□□□□ 0.09
BRAT1-205ENST00000473879 NT5C2P49902 561 aa15.61■□□□□ 0.09
BRAT1-205ENST00000473879 PRMT2P55345 433 aa15.61■□□□□ 0.09
BRAT1-205ENST00000473879 RAB3GAP1Q15042 981 aa15.61■□□□□ 0.09
BRAT1-205ENST00000473879 AKNAD1Q5T1N1 836 aa15.61■□□□□ 0.09
BRAT1-205ENST00000473879 USP17L2Q6R6M4 530 aa15.61■□□□□ 0.09
BRAT1-205ENST00000473879 MFSD6Q6ZSS7 791 aa15.61■□□□□ 0.09
BRAT1-205ENST00000473879 STOX1Q6ZVD7 989 aa15.61■□□□□ 0.09
BRAT1-205ENST00000473879 TBC1D10CQ8IV04 446 aa15.61■□□□□ 0.09
BRAT1-205ENST00000473879 SLC44A5Q8NCS7 719 aa15.61■□□□□ 0.09
BRAT1-205ENST00000473879 SMCR8Q8TEV9 937 aaPredicted RBP15.61■□□□□ 0.09
BRAT1-205ENST00000473879 DYNLL2Q96FJ2 89 aa15.61■□□□□ 0.09
BRAT1-205ENST00000473879 IPO9Q96P70 1041 aaKnown RBP15.61■□□□□ 0.09
BRAT1-205ENST00000473879 KRT23Q9C075 422 aa15.61■□□□□ 0.09
BRAT1-205ENST00000473879 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.61■□□□□ 0.09
BRAT1-205ENST00000473879 MGAMO43451 1857 aa15.61■□□□□ 0.09
BRAT1-205ENST00000473879 CTGFP29279 349 aa15.6■□□□□ 0.09
BRAT1-205ENST00000473879 PSMC4P43686 418 aa15.6■□□□□ 0.09
BRAT1-205ENST00000473879 CDK8P49336 464 aa15.6■□□□□ 0.09
BRAT1-205ENST00000473879 RGS19P49795 217 aa15.6■□□□□ 0.09
BRAT1-205ENST00000473879 USP14P54578 494 aa15.6■□□□□ 0.09
BRAT1-205ENST00000473879 CTDSPL2Q05D32 466 aa15.6■□□□□ 0.09
BRAT1-205ENST00000473879 ANKRD1Q15327 319 aa15.6■□□□□ 0.09
BRAT1-205ENST00000473879 C12orf42Q96LP6 360 aa15.6■□□□□ 0.09
BRAT1-205ENST00000473879 CCDC17Q96LX7 622 aa15.6■□□□□ 0.09
BRAT1-205ENST00000473879 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.6■□□□□ 0.09
BRAT1-205ENST00000473879 NBPF3Q9H094 633 aa15.6■□□□□ 0.09
BRAT1-205ENST00000473879 KIAA1683Q9H0B3 1180 aa15.6■□□□□ 0.09
BRAT1-205ENST00000473879 ASCC2Q9H1I8 757 aaPredicted RBP15.6■□□□□ 0.09
BRAT1-205ENST00000473879 EMILIN3Q9NT22 766 aa15.6■□□□□ 0.09
BRAT1-205ENST00000473879 PDRG1Q9NUG6 133 aa15.6■□□□□ 0.09
BRAT1-205ENST00000473879 TACC3Q9Y6A5 838 aa15.6■□□□□ 0.09
BRAT1-205ENST00000473879 HOXD10P28358 340 aa15.59■□□□□ 0.09
BRAT1-205ENST00000473879 MCM5P33992 734 aa15.59■□□□□ 0.09
BRAT1-205ENST00000473879 GCLCP48506 637 aaPredicted RBP15.59■□□□□ 0.09
BRAT1-205ENST00000473879 PDE4BQ07343 736 aa15.59■□□□□ 0.09
BRAT1-205ENST00000473879 SEPT2Q15019 361 aa15.59■□□□□ 0.09
BRAT1-205ENST00000473879 TMEM179Q6ZVK1 233 aa15.59■□□□□ 0.09
BRAT1-205ENST00000473879 DHX32Q7L7V1 743 aaKnown RBP15.59■□□□□ 0.09
BRAT1-205ENST00000473879 TRIM47Q96LD4 638 aa15.59■□□□□ 0.09
BRAT1-205ENST00000473879 TTC14Q96N46 770 aa15.59■□□□□ 0.09
BRAT1-205ENST00000473879 ZNF287Q9HBT7 754 aa15.59■□□□□ 0.09
BRAT1-205ENST00000473879 WDR19Q8NEZ3 1342 aa15.59■□□□□ 0.09
BRAT1-205ENST00000473879 IGKV6D-41A0A0C4DH26 115 aa15.58■□□□□ 0.08
BRAT1-205ENST00000473879 K7ELQ4 463 aaPredicted RBP15.58■□□□□ 0.08
BRAT1-205ENST00000473879 MPHOSPH10O00566 681 aaKnown RBP15.58■□□□□ 0.08
BRAT1-205ENST00000473879 FMNL1O95466 1100 aaPredicted RBP15.58■□□□□ 0.08
BRAT1-205ENST00000473879 RASA1P20936 1047 aa15.58■□□□□ 0.08
BRAT1-205ENST00000473879 FCGRTP55899 365 aa15.58■□□□□ 0.08
BRAT1-205ENST00000473879 FAM110CQ1W6H9 321 aa15.58■□□□□ 0.08
BRAT1-205ENST00000473879 SIAH1Q8IUQ4 282 aa15.58■□□□□ 0.08
BRAT1-205ENST00000473879 MB21D2Q8IYB1 491 aaPredicted RBP15.58■□□□□ 0.08
BRAT1-205ENST00000473879 ANKRD13CQ8N6S4 541 aa15.58■□□□□ 0.08
BRAT1-205ENST00000473879 ACER1Q8TDN7 264 aa15.58■□□□□ 0.08
BRAT1-205ENST00000473879 FEZ1Q99689 392 aa15.58■□□□□ 0.08
BRAT1-205ENST00000473879 ALDH8A1Q9H2A2 487 aaPredicted RBP15.58■□□□□ 0.08
BRAT1-205ENST00000473879 TOMM22Q9NS69 142 aa15.58■□□□□ 0.08
BRAT1-205ENST00000473879 PTCH2Q9Y6C5 1203 aa15.58■□□□□ 0.08
BRAT1-205ENST00000473879 NEDD4P46934 1319 aa15.58■□□□□ 0.08
BRAT1-205ENST00000473879 TNRC18O15417 2968 aaPredicted RBP15.57■□□□□ 0.08
BRAT1-205ENST00000473879 CPA1P15085 419 aa15.57■□□□□ 0.08
BRAT1-205ENST00000473879 AKR1B1P15121 316 aa15.57■□□□□ 0.08
BRAT1-205ENST00000473879 NOVP48745 357 aa15.57■□□□□ 0.08
BRAT1-205ENST00000473879 IRX3P78415 501 aaPredicted RBP15.57■□□□□ 0.08
BRAT1-205ENST00000473879 FGD1P98174 961 aa15.57■□□□□ 0.08
BRAT1-205ENST00000473879 ESR2Q92731 530 aa15.57■□□□□ 0.08
BRAT1-205ENST00000473879 ARMC5Q96C12 935 aa15.57■□□□□ 0.08
BRAT1-205ENST00000473879 SRRDQ9UH36 339 aa15.57■□□□□ 0.08
BRAT1-205ENST00000473879 PARP14Q460N5 1801 aa15.57■□□□□ 0.08
BRAT1-205ENST00000473879 RLFQ13129 1914 aa15.56■□□□□ 0.08
BRAT1-205ENST00000473879 BRCA2P51587 3418 aa15.56■□□□□ 0.08
BRAT1-205ENST00000473879 B4E1Z4 1266 aa15.56■□□□□ 0.08
BRAT1-205ENST00000473879 ORC4O43929 436 aa15.56■□□□□ 0.08
BRAT1-205ENST00000473879 AK2P54819 239 aa15.56■□□□□ 0.08
BRAT1-205ENST00000473879 ZYXQ15942 572 aaKnown RBP15.56■□□□□ 0.08
BRAT1-205ENST00000473879 RRP12Q5JTH9 1297 aaKnown RBP15.56■□□□□ 0.08
BRAT1-205ENST00000473879 GTF3C2Q8WUA4 911 aaPredicted RBP15.56■□□□□ 0.08
BRAT1-205ENST00000473879 P2RX7Q99572 595 aaKnown RBP15.56■□□□□ 0.08
BRAT1-205ENST00000473879 MTA3Q9BTC8 594 aa15.56■□□□□ 0.08
BRAT1-205ENST00000473879 MORF4L1Q9UBU8 362 aa15.56■□□□□ 0.08
BRAT1-205ENST00000473879 RBBP6Q7Z6E9 1792 aaKnown RBP15.56■□□□□ 0.08
BRAT1-205ENST00000473879 CENPFP49454 3210 aa15.55■□□□□ 0.08
BRAT1-205ENST00000473879 A0A0G2JMZ2 1700 aa15.55■□□□□ 0.08
BRAT1-205ENST00000473879 A0A1W2PRG0 241 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms