RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ARMCX6Q7L4S7 300 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 PANK1Q8TE04 598 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 L2HGDHQ9H9P8 463 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 CLIP2Q9UDT6 1046 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 ADAM21Q9UKJ8 722 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 AK9Q5TCS8 1911 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 ARHGAP5Q13017 1502 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 U2SURPO15042 1029 aaKnown RBP5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 GFRA3O60609 400 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 MYBL2P10244 700 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 PTSQ03393 145 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 TBC1D8BQ0IIM8 1120 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 LAMC2Q13753 1193 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 SMC1AQ14683 1233 aaKnown RBP5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 BMP2KLQ5H9B9 411 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 RIPOR1Q6ZS17 1223 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 OR13H1Q8NG92 308 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 ACBD3Q9H3P7 528 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 CCSER2Q9H7U1 834 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 AAASQ9NRG9 546 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 STRN4Q9NRL3 753 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 KCND1Q9NSA2 647 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 HCN2Q9UL51 889 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 EXOC6BQ9Y2D4 811 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 A2MP01023 1474 aa5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 COL16A1Q07092 1604 aaPredicted RBP5.92□□□□□ -1.46
TMEM39A-206ENST00000473684 PTGS1P23219 599 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 ABCD1P33897 745 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 MRPL12P52815 198 aaKnown RBP5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 DDR1Q08345 913 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 ZRSR2Q15696 482 aaKnown RBP5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 SLC5A9Q2M3M2 681 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 MSL3Q8N5Y2 521 aaKnown RBP5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 SLC43A3Q8NBI5 491 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 GLIS3Q8NEA6 775 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 ZNF483Q8TF39 744 aaPredicted RBP5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 NDFIP2Q9NV92 336 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 ZFATQ9P243 1243 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 MCM8Q9UJA3 840 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 SOS1Q07889 1333 aaPredicted RBP5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 DCDC2BA2VCK2 349 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 SOBPA7XYQ1 873 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 KHNYNO15037 678 aaKnown RBP5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 MMP20O60882 483 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 ERLIN2O94905 339 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 HCLS1P14317 486 aaPredicted RBP5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 HNRNPH1P31943 449 aaKnown RBP5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 NF2P35240 595 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 PRPHP41219 470 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 RPS6KA3P51812 740 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 ZNF394Q53GI3 561 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 PEAR1Q5VY43 1037 aaPredicted RBP5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 KRT25Q7Z3Z0 450 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 LATS2Q9NRM7 1088 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 PDRG1Q9NUG6 133 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 KANSL3Q9P2N6 904 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 SALL4Q9UJQ4 1053 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 ZDHHC9Q9Y397 364 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 COL24A1Q17RW2 1714 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 AATKQ6ZMQ8 1374 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 A0A1B0GUA9 196 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 A0A1W2PP55 124 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 ST8SIA5O15466 376 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 SNUPNO95149 360 aaKnown RBP5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 MAPTP10636 758 aaKnown RBP5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 MX1P20591 662 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 RACK1P63244 317 aaKnown RBP5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 ANKRD45Q5TZF3 282 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 HS2ST1Q7LGA3 356 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 SRA1Q9HD15 236 aaKnown RBP5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 ADAMTS8Q9UP79 889 aa5.91□□□□□ -1.46
TMEM39A-206ENST00000473684 DUOX2Q9NRD8 1548 aa5.9□□□□□ -1.46
TMEM39A-206ENST00000473684 CASTP20810 708 aaKnown RBP5.9□□□□□ -1.46
TMEM39A-206ENST00000473684 GPTP24298 496 aa5.9□□□□□ -1.46
TMEM39A-206ENST00000473684 RDXP35241 583 aaKnown RBP5.9□□□□□ -1.46
TMEM39A-206ENST00000473684 DBN1Q16643 649 aa5.9□□□□□ -1.46
TMEM39A-206ENST00000473684 ZSCAN25Q6NSZ9 544 aa5.9□□□□□ -1.46
TMEM39A-206ENST00000473684 TRIM74Q86UV6 250 aa5.9□□□□□ -1.46
TMEM39A-206ENST00000473684 TRIM73Q86UV7 250 aa5.9□□□□□ -1.46
TMEM39A-206ENST00000473684 ANKRD18AQ8IVF6 992 aa5.9□□□□□ -1.46
TMEM39A-206ENST00000473684 RPUSD2Q8IZ73 545 aaKnown RBP5.9□□□□□ -1.46
TMEM39A-206ENST00000473684 MICALL1Q8N3F8 863 aa5.9□□□□□ -1.46
TMEM39A-206ENST00000473684 DRAXINQ8NBI3 349 aaPredicted RBP5.9□□□□□ -1.46
TMEM39A-206ENST00000473684 CTCFLQ8NI51 663 aaPredicted RBP5.9□□□□□ -1.46
TMEM39A-206ENST00000473684 CUEDC1Q9NWM3 386 aaPredicted RBP5.9□□□□□ -1.46
TMEM39A-206ENST00000473684 CHCHD3Q9NX63 227 aaKnown RBP5.9□□□□□ -1.46
TMEM39A-206ENST00000473684 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.9□□□□□ -1.46
TMEM39A-206ENST00000473684 ADGRB3O60242 1522 aa5.9□□□□□ -1.47
TMEM39A-206ENST00000473684 ANKRD50Q9ULJ7 1429 aa5.9□□□□□ -1.47
TMEM39A-206ENST00000473684 H7C1W4 665 aa5.9□□□□□ -1.47
TMEM39A-206ENST00000473684 BNIP3LO60238 219 aa5.9□□□□□ -1.47
TMEM39A-206ENST00000473684 PPFIA4O75335 1185 aa5.9□□□□□ -1.47
TMEM39A-206ENST00000473684 RARAP10276 462 aa5.9□□□□□ -1.47
TMEM39A-206ENST00000473684 EDN3P14138 238 aa5.9□□□□□ -1.47
TMEM39A-206ENST00000473684 PKP1Q13835 747 aa5.9□□□□□ -1.47
TMEM39A-206ENST00000473684 GRIN2CQ14957 1233 aa5.9□□□□□ -1.47
TMEM39A-206ENST00000473684 ARHGAP29Q52LW3 1261 aa5.9□□□□□ -1.47
TMEM39A-206ENST00000473684 ZNF654Q8IZM8 581 aa5.9□□□□□ -1.47
TMEM39A-206ENST00000473684 SPC24Q8NBT2 197 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms