RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 CCNFP41002 786 aa6.34□□□□□ -1.39
SMC4-208ENST00000467468 CLCQ05315 142 aa6.34□□□□□ -1.39
SMC4-208ENST00000467468 ZP2Q05996 745 aa6.34□□□□□ -1.39
SMC4-208ENST00000467468 GNL2Q13823 731 aaKnown RBP6.34□□□□□ -1.39
SMC4-208ENST00000467468 COL9A2Q14055 689 aaPredicted RBP6.34□□□□□ -1.39
SMC4-208ENST00000467468 CDCP2Q5VXM1 449 aa6.34□□□□□ -1.39
SMC4-208ENST00000467468 CBLL1Q75N03 491 aa6.34□□□□□ -1.39
SMC4-208ENST00000467468 TMPRSS7Q7RTY8 843 aa6.34□□□□□ -1.39
SMC4-208ENST00000467468 DTWD2Q8NBA8 298 aa6.34□□□□□ -1.39
SMC4-208ENST00000467468 TMEM40Q8WWA1 233 aa6.34□□□□□ -1.39
SMC4-208ENST00000467468 KREMEN1Q96MU8 473 aa6.34□□□□□ -1.39
SMC4-208ENST00000467468 FERD3LQ96RJ6 166 aa6.34□□□□□ -1.39
SMC4-208ENST00000467468 GMLQ99445 158 aa6.34□□□□□ -1.39
SMC4-208ENST00000467468 RC3H2Q9HBD1 1191 aaKnown RBP6.34□□□□□ -1.39
SMC4-208ENST00000467468 SEMA3GQ9NS98 782 aa6.34□□□□□ -1.39
SMC4-208ENST00000467468 MEIS3P2A8K0S8 358 aa6.33□□□□□ -1.4
SMC4-208ENST00000467468 JUNBP17275 347 aaPredicted RBP6.33□□□□□ -1.4
SMC4-208ENST00000467468 TAL1P17542 331 aaPredicted RBP6.33□□□□□ -1.4
SMC4-208ENST00000467468 RACK1P63244 317 aaKnown RBP6.33□□□□□ -1.4
SMC4-208ENST00000467468 UBE2FQ969M7 185 aa6.33□□□□□ -1.4
SMC4-208ENST00000467468 ARMC5Q96C12 935 aa6.33□□□□□ -1.4
SMC4-208ENST00000467468 CCDC120Q96HB5 630 aa6.33□□□□□ -1.4
SMC4-208ENST00000467468 Q96M66 194 aa6.33□□□□□ -1.4
SMC4-208ENST00000467468 ASCC2Q9H1I8 757 aaPredicted RBP6.33□□□□□ -1.4
SMC4-208ENST00000467468 CNNM2Q9H8M5 875 aa6.33□□□□□ -1.4
SMC4-208ENST00000467468 ATP13A1Q9HD20 1204 aa6.33□□□□□ -1.4
SMC4-208ENST00000467468 ZSWIM5Q9P217 1185 aa6.33□□□□□ -1.4
SMC4-208ENST00000467468 ZNRF3Q9ULT6 936 aa6.33□□□□□ -1.4
SMC4-208ENST00000467468 PAX4O43316 350 aa6.32□□□□□ -1.4
SMC4-208ENST00000467468 PAK2Q13177 524 aa6.32□□□□□ -1.4
SMC4-208ENST00000467468 ATG4CQ96DT6 458 aa6.32□□□□□ -1.4
SMC4-208ENST00000467468 PUS7Q96PZ0 661 aaKnown RBP6.32□□□□□ -1.4
SMC4-208ENST00000467468 GPR62Q9BZJ7 368 aa6.32□□□□□ -1.4
SMC4-208ENST00000467468 CARS2Q9HA77 564 aaKnown RBP6.32□□□□□ -1.4
SMC4-208ENST00000467468 CLEC3AO75596 197 aa6.31□□□□□ -1.4
SMC4-208ENST00000467468 RNASE1P07998 156 aaKnown RBP6.31□□□□□ -1.4
SMC4-208ENST00000467468 NME1P15531 152 aaKnown RBP6.31□□□□□ -1.4
SMC4-208ENST00000467468 CANXP27824 592 aaKnown RBP6.31□□□□□ -1.4
SMC4-208ENST00000467468 FBXW10Q5XX13 1052 aa6.31□□□□□ -1.4
SMC4-208ENST00000467468 GPRASP2Q96D09 838 aa6.31□□□□□ -1.4
SMC4-208ENST00000467468 MBNL3Q9NUK0 354 aaKnown RBP6.31□□□□□ -1.4
SMC4-208ENST00000467468 TNFRSF10CO14798 259 aa6.3□□□□□ -1.4
SMC4-208ENST00000467468 UBOX5O94941 541 aa6.3□□□□□ -1.4
SMC4-208ENST00000467468 HMGB1P09429 215 aaKnown RBP6.3□□□□□ -1.4
SMC4-208ENST00000467468 ATP2B1P20020 1258 aa6.3□□□□□ -1.4
SMC4-208ENST00000467468 TPP2P29144 1249 aaPredicted RBP6.3□□□□□ -1.4
SMC4-208ENST00000467468 CLEC16AQ2KHT3 1053 aa6.3□□□□□ -1.4
SMC4-208ENST00000467468 ATG4DQ86TL0 474 aaPredicted RBP6.3□□□□□ -1.4
SMC4-208ENST00000467468 SYTL4Q96C24 671 aaPredicted RBP6.3□□□□□ -1.4
SMC4-208ENST00000467468 ASIC4Q96FT7 647 aa6.3□□□□□ -1.4
SMC4-208ENST00000467468 DHRS1Q96LJ7 313 aa6.3□□□□□ -1.4
SMC4-208ENST00000467468 CRBNQ96SW2 442 aa6.3□□□□□ -1.4
SMC4-208ENST00000467468 INPP5FQ9Y2H2 1132 aa6.3□□□□□ -1.4
SMC4-208ENST00000467468 ITGB5P18084 799 aa6.29□□□□□ -1.4
SMC4-208ENST00000467468 LTKP29376 864 aa6.29□□□□□ -1.4
SMC4-208ENST00000467468 POLR2BP30876 1174 aaKnown RBP6.29□□□□□ -1.4
SMC4-208ENST00000467468 INTS3Q68E01 1043 aaKnown RBP6.29□□□□□ -1.4
SMC4-208ENST00000467468 DPH6Q7L8W6 267 aa6.29□□□□□ -1.4
SMC4-208ENST00000467468 TSPYL5Q86VY4 417 aaPredicted RBP6.29□□□□□ -1.4
SMC4-208ENST00000467468 CREG2Q8IUH2 290 aa6.29□□□□□ -1.4
SMC4-208ENST00000467468 TAB3Q8N5C8 712 aaPredicted RBP6.29□□□□□ -1.4
SMC4-208ENST00000467468 LRRN4CLQ8ND94 238 aa6.29□□□□□ -1.4
SMC4-208ENST00000467468 TM9SF2Q99805 663 aa6.29□□□□□ -1.4
SMC4-208ENST00000467468 DUSP15Q9H1R2 295 aaPredicted RBP6.29□□□□□ -1.4
SMC4-208ENST00000467468 DUSP13Q9UII6 198 aa6.29□□□□□ -1.4
SMC4-208ENST00000467468 ADAMTS6Q9UKP5 1117 aa6.29□□□□□ -1.4
SMC4-208ENST00000467468 SRFP11831 508 aa6.28□□□□□ -1.4
SMC4-208ENST00000467468 HSP90B1P14625 803 aaKnown RBP6.28□□□□□ -1.4
SMC4-208ENST00000467468 DNAJA1P31689 397 aaKnown RBP6.28□□□□□ -1.4
SMC4-208ENST00000467468 GJA8P48165 433 aa6.28□□□□□ -1.4
SMC4-208ENST00000467468 ARID5AQ03989 594 aa6.28□□□□□ -1.4
SMC4-208ENST00000467468 FLAD1Q8NFF5 587 aa6.28□□□□□ -1.4
SMC4-208ENST00000467468 ENOX1Q8TC92 643 aaKnown RBP6.28□□□□□ -1.4
SMC4-208ENST00000467468 RASGRP4Q8TDF6 673 aa6.28□□□□□ -1.4
SMC4-208ENST00000467468 ALPK1Q96QP1 1244 aa6.28□□□□□ -1.4
SMC4-208ENST00000467468 ANTXR1Q9H6X2 564 aa6.28□□□□□ -1.4
SMC4-208ENST00000467468 PRDM7Q9NQW5 492 aa6.28□□□□□ -1.4
SMC4-208ENST00000467468 SMARCA5O60264 1052 aaPredicted RBP6.27□□□□□ -1.41
SMC4-208ENST00000467468 LRRN2O75325 713 aa6.27□□□□□ -1.41
SMC4-208ENST00000467468 SOX9P48436 509 aa6.27□□□□□ -1.41
SMC4-208ENST00000467468 NMIQ13287 307 aaPredicted RBP6.27□□□□□ -1.41
SMC4-208ENST00000467468 GAB4Q2WGN9 574 aa6.27□□□□□ -1.41
SMC4-208ENST00000467468 NBPF12Q5TAG4 269 aaPredicted RBP6.27□□□□□ -1.41
SMC4-208ENST00000467468 RBBP8NLQ8NC74 664 aaPredicted RBP6.27□□□□□ -1.41
SMC4-208ENST00000467468 OR6P1Q8NGX9 317 aa6.27□□□□□ -1.41
SMC4-208ENST00000467468 DHX38Q92620 1227 aaKnown RBP6.27□□□□□ -1.41
SMC4-208ENST00000467468 DNAJC2Q99543 621 aaKnown RBP6.27□□□□□ -1.41
SMC4-208ENST00000467468 MKRN2Q9H000 416 aaKnown RBP6.27□□□□□ -1.41
SMC4-208ENST00000467468 GINM1Q9NU53 330 aa6.27□□□□□ -1.41
SMC4-208ENST00000467468 SLAMF8Q9P0V8 285 aa6.27□□□□□ -1.41
SMC4-208ENST00000467468 PPT2Q9UMR5 302 aa6.27□□□□□ -1.41
SMC4-208ENST00000467468 EFR3BQ9Y2G0 817 aa6.27□□□□□ -1.41
SMC4-208ENST00000467468 ESR1P03372 595 aa6.26□□□□□ -1.41
SMC4-208ENST00000467468 RAC2P15153 192 aa6.26□□□□□ -1.41
SMC4-208ENST00000467468 GTF2F1P35269 517 aaKnown RBP eCLIP6.26□□□□□ -1.418e-49■■■■■ 172.1
SMC4-208ENST00000467468 AFMP43652 599 aa6.26□□□□□ -1.41
SMC4-208ENST00000467468 EIF6P56537 245 aaKnown RBP6.26□□□□□ -1.41
SMC4-208ENST00000467468 EGR3Q06889 387 aa6.26□□□□□ -1.41
SMC4-208ENST00000467468 VPS37DQ86XT2 251 aa6.26□□□□□ -1.41
SMC4-208ENST00000467468 SYTL5Q8TDW5 730 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms