RNA–Protein interactions for RNA: ENST00000463578.1

HMGN1P8-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 8, humanhuman

BASIC

Gene HMGN1P8, Length 288 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P8-201ENST00000463578 A0A087X0B3 334 aa8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 CCDC163A0A0D9SF12 145 aa8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 FAM229AH3BQW9 127 aa8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 PPP2R2AP63151 447 aa8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 PABPC4Q13310 644 aaKnown RBP eCLIP8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 TAF7LQ5H9L4 462 aa8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 XP32Q5T750 250 aa8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 ZNF385CQ66K41 422 aaPredicted RBP8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 IGF2-ASQ6U949 168 aa8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 ARMCX6Q7L4S7 300 aa8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 ZNF227Q86WZ6 799 aa8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 DHX37Q8IY37 1157 aaKnown RBP8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 NIM1KQ8IY84 436 aa8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 MFSD3Q96ES6 412 aa8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 FGD4Q96M96 766 aa8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 CLUHP3Q96NS8 147 aa8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 APBA2Q99767 749 aa8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 DHRS4Q9BTZ2 278 aa8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 PLVAPQ9BX97 442 aa8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 DDX56Q9NY93 547 aaKnown RBP8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 MRPS23Q9Y3D9 190 aaKnown RBP8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 ZNF451Q9Y4E5 1061 aa8.5□□□□□ -1.05
HMGN1P8-201ENST00000463578 RBAK-RBAKDNI3L0D1 243 aa8.49□□□□□ -1.05
HMGN1P8-201ENST00000463578 TBX1O43435 398 aa8.49□□□□□ -1.05
HMGN1P8-201ENST00000463578 KCNQ2O43526 872 aa8.49□□□□□ -1.05
HMGN1P8-201ENST00000463578 ASPAP45381 313 aa8.49□□□□□ -1.05
HMGN1P8-201ENST00000463578 PLEKHG6Q3KR16 790 aa8.49□□□□□ -1.05
HMGN1P8-201ENST00000463578 ANKRD39Q53RE8 183 aa8.49□□□□□ -1.05
HMGN1P8-201ENST00000463578 NBPF12Q5TAG4 269 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P8-201ENST00000463578 HEATR6Q6AI08 1181 aaKnown RBP8.49□□□□□ -1.05
HMGN1P8-201ENST00000463578 SMYD4Q8IYR2 804 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P8-201ENST00000463578 AGGF1Q8N302 714 aaeCLIP8.49□□□□□ -1.05
HMGN1P8-201ENST00000463578 XAGE3Q8WTP9 111 aa8.49□□□□□ -1.05
HMGN1P8-201ENST00000463578 MRPL18Q9H0U6 180 aaKnown RBP8.49□□□□□ -1.05
HMGN1P8-201ENST00000463578 RRAGCQ9HB90 399 aa8.49□□□□□ -1.05
HMGN1P8-201ENST00000463578 F8W735 103 aaPredicted RBP8.48□□□□□ -1.05
HMGN1P8-201ENST00000463578 AGRPO00253 132 aa8.48□□□□□ -1.05
HMGN1P8-201ENST00000463578 IRS4O14654 1257 aaPredicted RBP8.48□□□□□ -1.05
HMGN1P8-201ENST00000463578 MARCH6O60337 910 aa8.48□□□□□ -1.05
HMGN1P8-201ENST00000463578 RNGTTO60942 597 aaKnown RBP8.48□□□□□ -1.05
HMGN1P8-201ENST00000463578 LRIG2O94898 1065 aa8.48□□□□□ -1.05
HMGN1P8-201ENST00000463578 RAPGEF3O95398 923 aa8.48□□□□□ -1.05
HMGN1P8-201ENST00000463578 NAT2P11245 290 aa8.48□□□□□ -1.05
HMGN1P8-201ENST00000463578 GRIA2P42262 883 aa8.48□□□□□ -1.05
HMGN1P8-201ENST00000463578 CCDC144CPQ8IYA2 1237 aa8.48□□□□□ -1.05
HMGN1P8-201ENST00000463578 C12orf50Q8NA57 414 aaPredicted RBP8.48□□□□□ -1.05
HMGN1P8-201ENST00000463578 OSBP2Q969R2 916 aa8.48□□□□□ -1.05
HMGN1P8-201ENST00000463578 AARSD1Q9BTE6 412 aaKnown RBP8.48□□□□□ -1.05
HMGN1P8-201ENST00000463578 ACSS3Q9H6R3 686 aa8.48□□□□□ -1.05
HMGN1P8-201ENST00000463578 PIDD1Q9HB75 910 aa8.48□□□□□ -1.05
HMGN1P8-201ENST00000463578 METTL14Q9HCE5 456 aaKnown RBP8.48□□□□□ -1.05
HMGN1P8-201ENST00000463578 TRAV20A0A0B4J274 112 aa8.47□□□□□ -1.05
HMGN1P8-201ENST00000463578 PLD2O14939 933 aa8.47□□□□□ -1.05
HMGN1P8-201ENST00000463578 ELNP15502 786 aa8.47□□□□□ -1.05
HMGN1P8-201ENST00000463578 HSP90AA2PQ14568 343 aaPredicted RBP8.47□□□□□ -1.05
HMGN1P8-201ENST00000463578 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.47□□□□□ -1.05
HMGN1P8-201ENST00000463578 TMEM130Q8N3G9 435 aa8.47□□□□□ -1.05
HMGN1P8-201ENST00000463578 LRRN4CLQ8ND94 238 aa8.47□□□□□ -1.05
HMGN1P8-201ENST00000463578 MRGPRX3Q96LB0 322 aa8.47□□□□□ -1.05
HMGN1P8-201ENST00000463578 CEP131Q9UPN4 1083 aa8.47□□□□□ -1.05
HMGN1P8-201ENST00000463578 TRBV23-1A0A0A0MS06 115 aa8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 SPDYE3A6NKU9 549 aa8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 ARHGEF15O94989 841 aa8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 FGFR1P11362 822 aa8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 MYCLP1P12525 358 aaPredicted RBP8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 STAT3P40763 770 aa8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 PREPP48147 710 aa8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 FNDC3BQ53EP0 1204 aaKnown RBP8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 ANKRD34AQ69YU3 496 aa8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 SHISA2Q6UWI4 295 aa8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 JAMLQ86YT9 394 aa8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 SCUBE1Q8IWY4 988 aa8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 C7orf61Q8IZ16 206 aa8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 MFSD2AQ8NA29 543 aa8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 RIN3Q8TB24 985 aa8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 KREMEN1Q96MU8 473 aa8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 PSMG3-AS1Q96PY0 264 aa8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 IRF2BPLQ9H1B7 796 aa8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 CWC22Q9HCG8 908 aaKnown RBP8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 PCOLCE2Q9UKZ9 415 aa8.46□□□□□ -1.06
HMGN1P8-201ENST00000463578 GSG1L2A8MUP6 293 aa8.45□□□□□ -1.06
HMGN1P8-201ENST00000463578 PABPC1P11940 636 aaKnown RBP8.45□□□□□ -1.06
HMGN1P8-201ENST00000463578 CD247P20963 164 aa8.45□□□□□ -1.06
HMGN1P8-201ENST00000463578 FDX2Q6P4F2 183 aa8.45□□□□□ -1.06
HMGN1P8-201ENST00000463578 Q6ZS46 218 aa8.45□□□□□ -1.06
HMGN1P8-201ENST00000463578 NEDD1Q8NHV4 660 aa8.45□□□□□ -1.06
HMGN1P8-201ENST00000463578 CDC6Q99741 560 aa8.45□□□□□ -1.06
HMGN1P8-201ENST00000463578 GP6Q9HCN6 339 aa8.45□□□□□ -1.06
HMGN1P8-201ENST00000463578 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.44□□□□□ -1.06
HMGN1P8-201ENST00000463578 FAM83GA6ND36 823 aa8.44□□□□□ -1.06
HMGN1P8-201ENST00000463578 SLITRK5O94991 958 aa8.44□□□□□ -1.06
HMGN1P8-201ENST00000463578 ALX3O95076 343 aa8.44□□□□□ -1.06
HMGN1P8-201ENST00000463578 C6orf222P0C671 652 aaPredicted RBP8.44□□□□□ -1.06
HMGN1P8-201ENST00000463578 SDSP20132 328 aa8.44□□□□□ -1.06
HMGN1P8-201ENST00000463578 CDKN1CP49918 316 aaPredicted RBP8.44□□□□□ -1.06
HMGN1P8-201ENST00000463578 TRIM28Q13263 835 aaKnown RBP8.44□□□□□ -1.06
HMGN1P8-201ENST00000463578 AUHQ13825 339 aaKnown RBP8.44□□□□□ -1.06
HMGN1P8-201ENST00000463578 RNF180Q86T96 592 aa8.44□□□□□ -1.06
HMGN1P8-201ENST00000463578 BVESQ8NE79 360 aa8.44□□□□□ -1.06
HMGN1P8-201ENST00000463578 MRPL4Q9BYD3 311 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms