RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 PDIA3P30101 505 aaKnown RBP11.42□□□□□ -0.58
C9orf78-203ENST00000461539 PPATQ06203 517 aa11.42□□□□□ -0.58
C9orf78-203ENST00000461539 MTMR2Q13614 643 aa11.42□□□□□ -0.58
C9orf78-203ENST00000461539 SLFN13Q68D06 897 aa11.42□□□□□ -0.58
C9orf78-203ENST00000461539 APOA5Q6Q788 366 aa11.42□□□□□ -0.58
C9orf78-203ENST00000461539 CCDC144CPQ8IYA2 1237 aa11.42□□□□□ -0.58
C9orf78-203ENST00000461539 SNX21Q969T3 373 aa11.42□□□□□ -0.58
C9orf78-203ENST00000461539 MKL1Q969V6 931 aa11.42□□□□□ -0.58
C9orf78-203ENST00000461539 OPTNQ96CV9 577 aa11.42□□□□□ -0.58
C9orf78-203ENST00000461539 ZNF274Q96GC6 653 aaPredicted RBP11.42□□□□□ -0.58
C9orf78-203ENST00000461539 ZSCAN31Q96LW9 406 aaPredicted RBP11.42□□□□□ -0.58
C9orf78-203ENST00000461539 TBC1D2Q9BYX2 928 aa11.42□□□□□ -0.58
C9orf78-203ENST00000461539 SLKQ9H2G2 1235 aaPredicted RBP11.42□□□□□ -0.58
C9orf78-203ENST00000461539 NAV1Q8NEY1 1877 aa11.42□□□□□ -0.58
C9orf78-203ENST00000461539 F5H6K3 240 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 NDUFB10O96000 172 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 CALM1P0DP23 149 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 CALM2P0DP24 149 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 CALM3P0DP25 149 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 METAP2P50579 478 aaKnown RBP eCLIP11.41□□□□□ -0.58
C9orf78-203ENST00000461539 USP14P54578 494 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 BACE1P56817 501 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 EVCP57679 992 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 CCT2P78371 535 aaKnown RBP11.41□□□□□ -0.58
C9orf78-203ENST00000461539 KLRC3Q07444 240 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 PPIL2Q13356 520 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 BECN1Q14457 450 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 ME3Q16798 604 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 CCDC96Q2M329 555 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 SPICE1Q8N0Z3 855 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 CTCFLQ8NI51 663 aaPredicted RBP11.41□□□□□ -0.58
C9orf78-203ENST00000461539 TMX3Q96JJ7 454 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 KIAA1683Q9H0B3 1180 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 GOPCQ9HD26 462 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 SH2B1Q9NRF2 756 aaPredicted RBP11.41□□□□□ -0.58
C9orf78-203ENST00000461539 SYNPO2Q9UMS6 1093 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 AFG3L2Q9Y4W6 797 aa11.41□□□□□ -0.58
C9orf78-203ENST00000461539 C19orf81C9J6K1 198 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 K7ELQ4 463 aaPredicted RBP11.4□□□□□ -0.58
C9orf78-203ENST00000461539 CXCL11O14625 94 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 IRF6O14896 467 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 LARGE1O95461 756 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 PDHBP11177 359 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 KIF5BP33176 963 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 SLC1A4P43007 532 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 ZNF157P51786 506 aaPredicted RBP11.4□□□□□ -0.58
C9orf78-203ENST00000461539 RCAN1P53805 252 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 HMGCS2P54868 508 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 TROAPQ12815 778 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 MKRN3Q13064 507 aaKnown RBP11.4□□□□□ -0.58
C9orf78-203ENST00000461539 RTN1Q16799 776 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 USP17L2Q6R6M4 530 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 PAXIP1Q6ZW49 1069 aaPredicted RBP11.4□□□□□ -0.58
C9orf78-203ENST00000461539 RASGRP2Q7LDG7 609 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 SAPCD2Q86UD0 394 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 NECAB1Q8N987 351 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 FANCBQ8NB91 859 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 GMCL1P1Q8NEA9 526 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 WNK4Q96J92 1243 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 VCPKMTQ9H867 229 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 TMOD4Q9NZQ9 345 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 HPS5Q9UPZ3 1129 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 TLL2Q9Y6L7 1015 aa11.4□□□□□ -0.58
C9orf78-203ENST00000461539 FRMPD2Q68DX3 1309 aaPredicted RBP11.39□□□□□ -0.59
C9orf78-203ENST00000461539 CCDC196A0A1B0GTZ2 297 aa11.39□□□□□ -0.59
C9orf78-203ENST00000461539 CPLX1O14810 134 aa11.39□□□□□ -0.59
C9orf78-203ENST00000461539 PFKFB2O60825 505 aa11.39□□□□□ -0.59
C9orf78-203ENST00000461539 PARP1P09874 1014 aaKnown RBP11.39□□□□□ -0.59
C9orf78-203ENST00000461539 GOLGA8HP0CJ92 632 aa11.39□□□□□ -0.59
C9orf78-203ENST00000461539 GJA5P36382 358 aa11.39□□□□□ -0.59
C9orf78-203ENST00000461539 DGKZQ13574 1117 aa11.39□□□□□ -0.59
C9orf78-203ENST00000461539 GRM4Q14833 912 aa11.39□□□□□ -0.59
C9orf78-203ENST00000461539 KIAA1755Q5JYT7 1200 aa11.39□□□□□ -0.59
C9orf78-203ENST00000461539 RGMBQ6NW40 437 aa11.39□□□□□ -0.59
C9orf78-203ENST00000461539 CCDC83Q8IWF9 413 aa11.39□□□□□ -0.59
C9orf78-203ENST00000461539 DCAF4Q8WV16 495 aa11.39□□□□□ -0.59
C9orf78-203ENST00000461539 GMCL1Q96IK5 515 aa11.39□□□□□ -0.59
C9orf78-203ENST00000461539 NUP88Q99567 741 aaPredicted RBP11.39□□□□□ -0.59
C9orf78-203ENST00000461539 NCOA5Q9HCD5 579 aaKnown RBP11.39□□□□□ -0.59
C9orf78-203ENST00000461539 GPCPD1Q9NPB8 672 aa11.39□□□□□ -0.59
C9orf78-203ENST00000461539 EMILIN3Q9NT22 766 aa11.39□□□□□ -0.59
C9orf78-203ENST00000461539 DHX16O60231 1041 aaKnown RBP11.38□□□□□ -0.59
C9orf78-203ENST00000461539 SNHG28P0DPA3 235 aa11.38□□□□□ -0.59
C9orf78-203ENST00000461539 BMP3P12645 472 aa11.38□□□□□ -0.59
C9orf78-203ENST00000461539 CDC27P30260 824 aa11.38□□□□□ -0.59
C9orf78-203ENST00000461539 ADD1P35611 737 aaKnown RBP11.38□□□□□ -0.59
C9orf78-203ENST00000461539 GNAQP50148 359 aa11.38□□□□□ -0.59
C9orf78-203ENST00000461539 APLP1P51693 650 aa11.38□□□□□ -0.59
C9orf78-203ENST00000461539 ZNF543Q08ER8 600 aa11.38□□□□□ -0.59
C9orf78-203ENST00000461539 SCRN1Q12765 414 aa11.38□□□□□ -0.59
C9orf78-203ENST00000461539 IKQ13123 557 aaPredicted RBP11.38□□□□□ -0.59
C9orf78-203ENST00000461539 SNAPC2Q13487 334 aa11.38□□□□□ -0.59
C9orf78-203ENST00000461539 FAM83BQ5T0W9 1011 aa11.38□□□□□ -0.59
C9orf78-203ENST00000461539 SPRYD7Q5W111 196 aa11.38□□□□□ -0.59
C9orf78-203ENST00000461539 CPLX2Q6PUV4 134 aaKnown RBP11.38□□□□□ -0.59
C9orf78-203ENST00000461539 GADL1Q6ZQY3 521 aa11.38□□□□□ -0.59
C9orf78-203ENST00000461539 KCTD1Q719H9 257 aa11.38□□□□□ -0.59
C9orf78-203ENST00000461539 RASAL3Q86YV0 1011 aa11.38□□□□□ -0.59
C9orf78-203ENST00000461539 LPAR1Q92633 364 aa11.38□□□□□ -0.59
C9orf78-203ENST00000461539 GTF3C6Q969F1 213 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms