RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 FAM210AQ96ND0 272 aa5.84□□□□□ -1.47
HMGB3P9-201ENST00000441799 KIAA1522Q9P206 1035 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P9-201ENST00000441799 GOLGA6L3A6NEY3 463 aa5.83□□□□□ -1.48
HMGB3P9-201ENST00000441799 EOMESO95936 686 aa5.83□□□□□ -1.48
HMGB3P9-201ENST00000441799 KRT1P04264 644 aa5.83□□□□□ -1.48
HMGB3P9-201ENST00000441799 PEX19P40855 299 aa5.83□□□□□ -1.48
HMGB3P9-201ENST00000441799 RAP1GAPP47736 663 aa5.83□□□□□ -1.48
HMGB3P9-201ENST00000441799 GYS2P54840 703 aa5.83□□□□□ -1.48
HMGB3P9-201ENST00000441799 RING1Q06587 406 aa5.83□□□□□ -1.48
HMGB3P9-201ENST00000441799 RGL3Q3MIN7 710 aa5.83□□□□□ -1.48
HMGB3P9-201ENST00000441799 PPM1JQ5JR12 505 aa5.83□□□□□ -1.48
HMGB3P9-201ENST00000441799 PRR23BQ6ZRT6 265 aa5.83□□□□□ -1.48
HMGB3P9-201ENST00000441799 CREBRFQ8IUR6 639 aa5.83□□□□□ -1.48
HMGB3P9-201ENST00000441799 NGEFQ8N5V2 710 aa5.83□□□□□ -1.48
HMGB3P9-201ENST00000441799 BCO2Q9BYV7 579 aa5.83□□□□□ -1.48
HMGB3P9-201ENST00000441799 GNL3LQ9NVN8 582 aaKnown RBP5.83□□□□□ -1.48
HMGB3P9-201ENST00000441799 GTF2IRD1Q9UHL9 959 aa5.83□□□□□ -1.48
HMGB3P9-201ENST00000441799 CSADQ9Y600 493 aa5.83□□□□□ -1.48
HMGB3P9-201ENST00000441799 PITPNM2Q9BZ72 1349 aa5.82□□□□□ -1.48
HMGB3P9-201ENST00000441799 CNTNAP4Q9C0A0 1308 aa5.82□□□□□ -1.48
HMGB3P9-201ENST00000441799 CFAP69A5D8W1 941 aa5.82□□□□□ -1.48
HMGB3P9-201ENST00000441799 STK10O94804 968 aaKnown RBP5.82□□□□□ -1.48
HMGB3P9-201ENST00000441799 NME2P22392 152 aa5.82□□□□□ -1.48
HMGB3P9-201ENST00000441799 NEXNQ0ZGT2 675 aa5.82□□□□□ -1.48
HMGB3P9-201ENST00000441799 GRIN3AQ8TCU5 1115 aa5.82□□□□□ -1.48
HMGB3P9-201ENST00000441799 ALKBH8Q96BT7 664 aaKnown RBP5.82□□□□□ -1.48
HMGB3P9-201ENST00000441799 BORCS6Q96GS4 357 aa5.82□□□□□ -1.48
HMGB3P9-201ENST00000441799 PAIP2Q9BPZ3 127 aaKnown RBP5.82□□□□□ -1.48
HMGB3P9-201ENST00000441799 KRTAP17-1Q9BYP8 105 aa5.82□□□□□ -1.48
HMGB3P9-201ENST00000441799 C19orf73Q9NVV2 129 aa5.82□□□□□ -1.48
HMGB3P9-201ENST00000441799 KLHL42Q9P2K6 505 aa5.82□□□□□ -1.48
HMGB3P9-201ENST00000441799 ANAPC4Q9UJX5 808 aa5.82□□□□□ -1.48
HMGB3P9-201ENST00000441799 TPX2Q9ULW0 747 aaKnown RBP5.82□□□□□ -1.48
HMGB3P9-201ENST00000441799 SMC3Q9UQE7 1217 aa5.82□□□□□ -1.48
HMGB3P9-201ENST00000441799 RBAK-RBAKDNI3L0D1 243 aa5.81□□□□□ -1.48
HMGB3P9-201ENST00000441799 U2SURPO15042 1029 aaKnown RBP5.81□□□□□ -1.48
HMGB3P9-201ENST00000441799 TSPAN15O95858 294 aa5.81□□□□□ -1.48
HMGB3P9-201ENST00000441799 XRCC5P13010 732 aaKnown RBP5.81□□□□□ -1.48
HMGB3P9-201ENST00000441799 BMP6P22004 513 aa5.81□□□□□ -1.48
HMGB3P9-201ENST00000441799 AFMP43652 599 aa5.81□□□□□ -1.48
HMGB3P9-201ENST00000441799 TNNT2P45379 298 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P9-201ENST00000441799 HNRNPUQ00839 825 aaKnown RBP eCLIP5.81□□□□□ -1.48
HMGB3P9-201ENST00000441799 TBC1D10BQ4KMP7 808 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P9-201ENST00000441799 DNTTIP2Q5QJE6 756 aaKnown RBP5.81□□□□□ -1.48
HMGB3P9-201ENST00000441799 RPAINQ86UA6 219 aa5.81□□□□□ -1.48
HMGB3P9-201ENST00000441799 TXNDC2Q86VQ3 553 aa5.81□□□□□ -1.48
HMGB3P9-201ENST00000441799 TMC1Q8TDI8 760 aa5.81□□□□□ -1.48
HMGB3P9-201ENST00000441799 LMCD1Q9NZU5 365 aa5.81□□□□□ -1.48
HMGB3P9-201ENST00000441799 SWAP70Q9UH65 585 aa5.81□□□□□ -1.48
HMGB3P9-201ENST00000441799 AKAP2Q9Y2D5 859 aa5.81□□□□□ -1.48
HMGB3P9-201ENST00000441799 DCDC2CA8MYV0 355 aa5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 COQ9O75208 318 aa5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 PARNO95453 639 aaKnown RBP5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 CD151P48509 253 aa5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 POU5F1Q01860 360 aaKnown RBP5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 DMTNQ08495 405 aa5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 GJC2Q5T442 439 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 ICE2Q659A1 982 aa5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 NXPE4Q6UWF7 544 aa5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 SYDE1Q6ZW31 735 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 C12orf40Q86WS4 652 aa5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 C3orf58Q8NDZ4 430 aa5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 SCYL1Q96KG9 808 aa5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 DMRTB1Q96MA1 342 aa5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 TOX2Q96NM4 488 aa5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 NECAB3Q96P71 396 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 RBCK1Q9BYM8 510 aa5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 KRTAP4-5Q9BYR2 181 aa5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 SEMA3GQ9NS98 782 aa5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 PPP4R2Q9NY27 417 aa5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 NRBP1Q9UHY1 535 aa5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 FBXO9Q9UK97 447 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P9-201ENST00000441799 BICDL2A1A5D9 508 aa5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 PRR33A8MZF0 331 aa5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 IPO8O15397 1037 aaKnown RBP5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 CBFA2T2O43439 604 aa5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 WDHD1O75717 1129 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 TPM2P07951 284 aa5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 GLI1P08151 1106 aa5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 NEFHP12036 1026 aa5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 TDO2P48775 406 aa5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 CLCN7P51798 805 aa5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 HDLBPQ00341 1268 aaKnown RBP5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 LMOD3Q0VAK6 560 aa5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 ZBTB37Q5TC79 503 aa5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 RASIP1Q5U651 963 aa5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 SND1Q7KZF4 910 aaKnown RBP eCLIP5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 LRRC56Q8IYG6 542 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 MRRFQ96E11 262 aaKnown RBP5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 GPATCH3Q96I76 525 aa5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 EMILIN2Q9BXX0 1053 aa5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 CARS2Q9HA77 564 aaKnown RBP5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 ATP13A1Q9HD20 1204 aa5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 USTQ9Y2C2 406 aa5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 FAN1Q9Y2M0 1017 aa5.79□□□□□ -1.48
HMGB3P9-201ENST00000441799 CEP164Q9UPV0 1460 aa5.78□□□□□ -1.48
HMGB3P9-201ENST00000441799 FANCGO15287 622 aa5.78□□□□□ -1.48
HMGB3P9-201ENST00000441799 PAGE1O75459 146 aa5.78□□□□□ -1.48
HMGB3P9-201ENST00000441799 C1QTNF9P0C862 333 aa5.78□□□□□ -1.48
HMGB3P9-201ENST00000441799 VDRP11473 427 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms