RNA–Protein interactions for RNA: ENST00000439704.1

NMD3P1-201, Transcript of NMD3 ribosome export adaptor pseudogene 1, humanhuman

BASIC

Gene NMD3P1, Length 1,488 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3P1-201ENST00000439704 LNPKQ9C0E8 428 aa5.68□□□□□ -1.5
NMD3P1-201ENST00000439704 LMCD1Q9NZU5 365 aa5.68□□□□□ -1.5
NMD3P1-201ENST00000439704 REV1Q9UBZ9 1251 aa5.68□□□□□ -1.5
NMD3P1-201ENST00000439704 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.68□□□□□ -1.5
NMD3P1-201ENST00000439704 POLR3KQ9Y2Y1 108 aaPredicted RBP5.68□□□□□ -1.5
NMD3P1-201ENST00000439704 FGD5Q6ZNL6 1462 aa5.68□□□□□ -1.5
NMD3P1-201ENST00000439704 KIF21AQ7Z4S6 1674 aa5.68□□□□□ -1.5
NMD3P1-201ENST00000439704 WDR97A6NE52 1622 aa5.68□□□□□ -1.5
NMD3P1-201ENST00000439704 WDR62O43379 1518 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 TLDC2A0PJX2 215 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 UPK3BL1B0FP48 263 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 UPK3BL2E5RIL1 263 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 BIN1O00499 593 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 HTR3BO95264 441 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 ITGB5P18084 799 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 IKZF1Q13422 519 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 MLECQ14165 292 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 CWF19L2Q2TBE0 894 aaKnown RBP5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 LDLRAD1Q5T700 205 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 FAM13CQ8NE31 585 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 DNAJB8Q8NHS0 232 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 PIWIL2Q8TC59 973 aaKnown RBP5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 CYB5D2Q8WUJ1 264 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 ZNF296Q8WUU4 475 aaPredicted RBP5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 HSPA12BQ96MM6 686 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 LRRC3Q9BY71 257 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 BACH2Q9BYV9 841 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 MYH16Q9H6N6 1097 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 MBNL3Q9NUK0 354 aaKnown RBP5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 ST14Q9Y5Y6 855 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 SOGA1O94964 1423 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 SBNO2Q9Y2G9 1366 aa5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 URB2Q14146 1524 aaKnown RBP5.67□□□□□ -1.5
NMD3P1-201ENST00000439704 IFT140Q96RY7 1462 aa5.66□□□□□ -1.5
NMD3P1-201ENST00000439704 GRIN3BO60391 1043 aa5.66□□□□□ -1.5
NMD3P1-201ENST00000439704 RNASE1P07998 156 aaKnown RBP5.66□□□□□ -1.5
NMD3P1-201ENST00000439704 CDKAL1Q5VV42 579 aa5.66□□□□□ -1.5
NMD3P1-201ENST00000439704 C9orf131Q5VYM1 1079 aa5.66□□□□□ -1.5
NMD3P1-201ENST00000439704 THAP5Q7Z6K1 395 aa5.66□□□□□ -1.5
NMD3P1-201ENST00000439704 FBXO27Q8NI29 283 aa5.66□□□□□ -1.5
NMD3P1-201ENST00000439704 ASIC4Q96FT7 647 aa5.66□□□□□ -1.5
NMD3P1-201ENST00000439704 FMNL2Q96PY5 1086 aa5.66□□□□□ -1.5
NMD3P1-201ENST00000439704 SEMA3GQ9NS98 782 aa5.66□□□□□ -1.5
NMD3P1-201ENST00000439704 ABCA10Q8WWZ4 1543 aa5.66□□□□□ -1.5
NMD3P1-201ENST00000439704 POLA1P09884 1462 aaPredicted RBP5.66□□□□□ -1.5
NMD3P1-201ENST00000439704 SCAMP3O14828 347 aaKnown RBP5.65□□□□□ -1.5
NMD3P1-201ENST00000439704 HDLBPQ00341 1268 aaKnown RBP5.65□□□□□ -1.5
NMD3P1-201ENST00000439704 ZP2Q05996 745 aa5.65□□□□□ -1.5
NMD3P1-201ENST00000439704 ATG4DQ86TL0 474 aaPredicted RBP5.65□□□□□ -1.5
NMD3P1-201ENST00000439704 PPP1R13LQ8WUF5 828 aa5.65□□□□□ -1.5
NMD3P1-201ENST00000439704 PRDM16Q9HAZ2 1276 aa5.65□□□□□ -1.5
NMD3P1-201ENST00000439704 ADAMTS1Q9UHI8 967 aa5.65□□□□□ -1.5
NMD3P1-201ENST00000439704 ADAMTS6Q9UKP5 1117 aa5.65□□□□□ -1.5
NMD3P1-201ENST00000439704 CHURC1-FNTBB4DL54 471 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 TLR3O15455 904 aaKnown RBP5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 ATE1O95260 518 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 ZNF76P36508 570 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 TXKP42681 527 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 TNK2Q07912 1038 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 CCDC74BQ96LY2 380 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 RC3H2Q9HBD1 1191 aaKnown RBP5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 METTL14Q9HCE5 456 aaKnown RBP5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 METTL5Q9NRN9 209 aaKnown RBP5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 RNF114Q9Y508 228 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 CUX2O14529 1486 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 H3BS24 57 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 TPD52L2O43399 206 aaKnown RBP5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 ATP2B1P20020 1258 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 IGBP1P78318 339 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 GORABQ5T7V8 394 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 REXO1Q8N1G1 1221 aaKnown RBP5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 DHX38Q92620 1227 aaKnown RBP5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 UBE2FQ969M7 185 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 NT5C1AQ9BXI3 368 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 EHMT1Q9H9B1 1298 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 BRMS1Q9HCU9 246 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 ATP13A1Q9HD20 1204 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 KLHL3Q9UH77 587 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 KCNH3Q9ULD8 1083 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 SUGT1Q9Y2Z0 365 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 PCDHB14Q9Y5E9 798 aa5.64□□□□□ -1.51
NMD3P1-201ENST00000439704 THOC2Q8NI27 1593 aaKnown RBP5.63□□□□□ -1.51
NMD3P1-201ENST00000439704 hCG_2014768A0A024R1R8 64 aa5.63□□□□□ -1.51
NMD3P1-201ENST00000439704 SLC22A31A6NKX4 558 aa5.63□□□□□ -1.51
NMD3P1-201ENST00000439704 GTF2F1P35269 517 aaKnown RBP eCLIP5.63□□□□□ -1.51
NMD3P1-201ENST00000439704 TNNI2P48788 182 aa5.63□□□□□ -1.51
NMD3P1-201ENST00000439704 APOBRQ0VD83 1088 aa5.63□□□□□ -1.51
NMD3P1-201ENST00000439704 CCDC144BQ3MJ40 725 aa5.63□□□□□ -1.51
NMD3P1-201ENST00000439704 SDE2Q6IQ49 451 aa5.63□□□□□ -1.51
NMD3P1-201ENST00000439704 TMPRSS7Q7RTY8 843 aa5.63□□□□□ -1.51
NMD3P1-201ENST00000439704 LRRN4CLQ8ND94 238 aa5.63□□□□□ -1.51
NMD3P1-201ENST00000439704 RNF141Q8WVD5 230 aa5.63□□□□□ -1.51
NMD3P1-201ENST00000439704 UBP1Q9NZI7 540 aa5.63□□□□□ -1.51
NMD3P1-201ENST00000439704 ZSWIM5Q9P217 1185 aa5.63□□□□□ -1.51
NMD3P1-201ENST00000439704 GOLGA3Q08378 1498 aa5.63□□□□□ -1.51
NMD3P1-201ENST00000439704 KIF21BO75037 1637 aa5.62□□□□□ -1.51
NMD3P1-201ENST00000439704 PAPLNO95428 1278 aa5.62□□□□□ -1.51
NMD3P1-201ENST00000439704 IBSPP21815 317 aaPredicted RBP5.62□□□□□ -1.51
NMD3P1-201ENST00000439704 CRKP46108 304 aa5.62□□□□□ -1.51
NMD3P1-201ENST00000439704 ZNF165P49910 485 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms