RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 PLXNB2O15031 1838 aa18.16■□□□□ 0.5
PTCD1-204ENST00000430982 VCANP13611 3396 aa18.16■□□□□ 0.5
PTCD1-204ENST00000430982 A0A0D9SFI3 127 aa18.15■□□□□ 0.5
PTCD1-204ENST00000430982 SDSP20132 328 aa18.15■□□□□ 0.5
PTCD1-204ENST00000430982 TTC22Q5TAA0 569 aa18.15■□□□□ 0.5
PTCD1-204ENST00000430982 CENPQQ7L2Z9 268 aaPredicted RBP18.15■□□□□ 0.5
PTCD1-204ENST00000430982 TICAM2Q86XR7 235 aa18.15■□□□□ 0.5
PTCD1-204ENST00000430982 IFNL3Q8IZI9 196 aa18.15■□□□□ 0.5
PTCD1-204ENST00000430982 STK11IPQ8N1F8 1099 aa18.15■□□□□ 0.5
PTCD1-204ENST00000430982 ANKRD13CQ8N6S4 541 aa18.15■□□□□ 0.5
PTCD1-204ENST00000430982 SMCR8Q8TEV9 937 aaPredicted RBP18.15■□□□□ 0.5
PTCD1-204ENST00000430982 COA7Q96BR5 231 aa18.15■□□□□ 0.5
PTCD1-204ENST00000430982 WDR18Q9BV38 432 aa18.15■□□□□ 0.5
PTCD1-204ENST00000430982 CDK8P49336 464 aa18.14■□□□□ 0.49
PTCD1-204ENST00000430982 HMGCS2P54868 508 aa18.14■□□□□ 0.49
PTCD1-204ENST00000430982 MTMR2Q13614 643 aa18.14■□□□□ 0.49
PTCD1-204ENST00000430982 MCMDC2Q4G0Z9 681 aa18.14■□□□□ 0.49
PTCD1-204ENST00000430982 SBK1Q52WX2 424 aa18.14■□□□□ 0.49
PTCD1-204ENST00000430982 C16orf86Q6ZW13 317 aa18.14■□□□□ 0.49
PTCD1-204ENST00000430982 NAPBQ9H115 298 aa18.14■□□□□ 0.49
PTCD1-204ENST00000430982 DIAPH3Q9NSV4 1193 aa18.14■□□□□ 0.49
PTCD1-204ENST00000430982 GJD2Q9UKL4 321 aa18.14■□□□□ 0.49
PTCD1-204ENST00000430982 TAOK2Q9UL54 1235 aa18.14■□□□□ 0.49
PTCD1-204ENST00000430982 OGDHLQ9ULD0 1010 aa18.14■□□□□ 0.49
PTCD1-204ENST00000430982 RPTORQ8N122 1335 aa18.14■□□□□ 0.49
PTCD1-204ENST00000430982 LAMA2P24043 3122 aaKnown RBP18.14■□□□□ 0.49
PTCD1-204ENST00000430982 GSPT1P15170 499 aaKnown RBP18.13■□□□□ 0.49
PTCD1-204ENST00000430982 CCDC136Q96JN2 1154 aa18.13■□□□□ 0.49
PTCD1-204ENST00000430982 FEZ1Q99689 392 aa18.13■□□□□ 0.49
PTCD1-204ENST00000430982 C11orf49Q9H6J7 331 aa18.13■□□□□ 0.49
PTCD1-204ENST00000430982 PFASO15067 1338 aa18.13■□□□□ 0.49
PTCD1-204ENST00000430982 AKR1B1P15121 316 aa18.12■□□□□ 0.49
PTCD1-204ENST00000430982 SYN1P17600 705 aa18.12■□□□□ 0.49
PTCD1-204ENST00000430982 BACE1P56817 501 aa18.12■□□□□ 0.49
PTCD1-204ENST00000430982 SEPT2Q15019 361 aa18.12■□□□□ 0.49
PTCD1-204ENST00000430982 TREML2Q5T2D2 321 aa18.12■□□□□ 0.49
PTCD1-204ENST00000430982 MAP3K21Q5TCX8 1036 aa18.12■□□□□ 0.49
PTCD1-204ENST00000430982 VPS53Q5VIR6 699 aa18.12■□□□□ 0.49
PTCD1-204ENST00000430982 HMX1Q9NP08 348 aaPredicted RBP18.12■□□□□ 0.49
PTCD1-204ENST00000430982 TMOD4Q9NZQ9 345 aa18.12■□□□□ 0.49
PTCD1-204ENST00000430982 PNMA3Q9UL41 463 aa18.12■□□□□ 0.49
PTCD1-204ENST00000430982 BAZ2AQ9UIF9 1905 aaKnown RBP18.11■□□□□ 0.49
PTCD1-204ENST00000430982 USP17L10C9JJH3 530 aa18.11■□□□□ 0.49
PTCD1-204ENST00000430982 HIP1O00291 1037 aa18.11■□□□□ 0.49
PTCD1-204ENST00000430982 GUCY1A2P33402 732 aa18.11■□□□□ 0.49
PTCD1-204ENST00000430982 TRIM32Q13049 653 aa18.11■□□□□ 0.49
PTCD1-204ENST00000430982 SH3D19Q5HYK7 790 aa18.11■□□□□ 0.49
PTCD1-204ENST00000430982 CWC27Q6UX04 472 aaKnown RBP18.11■□□□□ 0.49
PTCD1-204ENST00000430982 TMEM179Q6ZVK1 233 aa18.11■□□□□ 0.49
PTCD1-204ENST00000430982 ZNF589Q86UQ0 364 aaPredicted RBP18.11■□□□□ 0.49
PTCD1-204ENST00000430982 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.11■□□□□ 0.49
PTCD1-204ENST00000430982 PROCA1Q8NCQ7 364 aaPredicted RBP18.11■□□□□ 0.49
PTCD1-204ENST00000430982 CCDC17Q96LX7 622 aa18.11■□□□□ 0.49
PTCD1-204ENST00000430982 MKNK2Q9HBH9 465 aa18.11■□□□□ 0.49
PTCD1-204ENST00000430982 ATAD5Q96QE3 1844 aa18.11■□□□□ 0.49
PTCD1-204ENST00000430982 CCDC171Q6TFL3 1326 aa18.1■□□□□ 0.49
PTCD1-204ENST00000430982 C19orf81C9J6K1 198 aa18.1■□□□□ 0.49
PTCD1-204ENST00000430982 COL6A1P12109 1028 aa18.1■□□□□ 0.49
PTCD1-204ENST00000430982 ZYXQ15942 572 aaKnown RBP18.1■□□□□ 0.49
PTCD1-204ENST00000430982 FAM109BQ6ICB4 259 aaPredicted RBP18.1■□□□□ 0.49
PTCD1-204ENST00000430982 ACER1Q8TDN7 264 aa18.1■□□□□ 0.49
PTCD1-204ENST00000430982 UBE2OQ9C0C9 1292 aaKnown RBP18.1■□□□□ 0.49
PTCD1-204ENST00000430982 ROBO3Q96MS0 1386 aa18.09■□□□□ 0.49
PTCD1-204ENST00000430982 EYSQ5T1H1 3165 aa18.09■□□□□ 0.49
PTCD1-204ENST00000430982 POTEB2H3BUK9 544 aa18.09■□□□□ 0.49
PTCD1-204ENST00000430982 FOXP2O15409 715 aa18.09■□□□□ 0.49
PTCD1-204ENST00000430982 SLC3A2P08195 630 aaKnown RBP18.09■□□□□ 0.49
PTCD1-204ENST00000430982 GCLCP48506 637 aaPredicted RBP18.09■□□□□ 0.49
PTCD1-204ENST00000430982 MFAP1P55081 439 aaKnown RBP18.09■□□□□ 0.49
PTCD1-204ENST00000430982 PPARAQ07869 468 aa18.09■□□□□ 0.49
PTCD1-204ENST00000430982 PABPC4Q13310 644 aaKnown RBP eCLIP18.09■□□□□ 0.496e-20■■■□□ 14.6
PTCD1-204ENST00000430982 USP17L2Q6R6M4 530 aa18.09■□□□□ 0.49
PTCD1-204ENST00000430982 TRIB2Q92519 343 aa18.09■□□□□ 0.49
PTCD1-204ENST00000430982 GUCD1Q96NT3 240 aa18.09■□□□□ 0.49
PTCD1-204ENST00000430982 PRDM1O75626 825 aa18.08■□□□□ 0.48
PTCD1-204ENST00000430982 SKAP1Q86WV1 359 aa18.08■□□□□ 0.48
PTCD1-204ENST00000430982 CLEC10AQ8IUN9 316 aa18.08■□□□□ 0.48
PTCD1-204ENST00000430982 ZNF287Q9HBT7 754 aa18.08■□□□□ 0.48
PTCD1-204ENST00000430982 EMILIN3Q9NT22 766 aa18.08■□□□□ 0.48
PTCD1-204ENST00000430982 MORF4L1Q9UBU8 362 aa18.08■□□□□ 0.48
PTCD1-204ENST00000430982 HSPD1P10809 573 aaKnown RBP18.07■□□□□ 0.48
PTCD1-204ENST00000430982 RASA1P20936 1047 aa18.07■□□□□ 0.48
PTCD1-204ENST00000430982 USP14P54578 494 aa18.07■□□□□ 0.48
PTCD1-204ENST00000430982 ATP2B2Q01814 1243 aa18.07■□□□□ 0.48
PTCD1-204ENST00000430982 ICA1Q05084 483 aa18.07■□□□□ 0.48
PTCD1-204ENST00000430982 ALX1Q15699 326 aa18.07■□□□□ 0.48
PTCD1-204ENST00000430982 KIAA1683Q9H0B3 1180 aa18.07■□□□□ 0.48
PTCD1-204ENST00000430982 IRX3P78415 501 aaPredicted RBP18.06■□□□□ 0.48
PTCD1-204ENST00000430982 CTDSPL2Q05D32 466 aa18.06■□□□□ 0.48
PTCD1-204ENST00000430982 PDE4BQ07343 736 aa18.06■□□□□ 0.48
PTCD1-204ENST00000430982 ZNF444Q8N0Y2 327 aaPredicted RBP18.06■□□□□ 0.48
PTCD1-204ENST00000430982 ASCC2Q9H1I8 757 aaPredicted RBP18.06■□□□□ 0.48
PTCD1-204ENST00000430982 ARHGEF10LQ9HCE6 1279 aa18.06■□□□□ 0.48
PTCD1-204ENST00000430982 DNAH12Q6ZR08 3092 aa18.05■□□□□ 0.48
PTCD1-204ENST00000430982 A0A1W2PRG0 241 aa18.05■□□□□ 0.48
PTCD1-204ENST00000430982 FGAP02671 866 aa18.05■□□□□ 0.48
PTCD1-204ENST00000430982 XRCC5P13010 732 aaKnown RBP18.05■□□□□ 0.48
PTCD1-204ENST00000430982 C12orf42Q96LP6 360 aa18.05■□□□□ 0.48
PTCD1-204ENST00000430982 PRKAR2AP13861 404 aaKnown RBP18.04■□□□□ 0.48
PTCD1-204ENST00000430982 SH2D4AQ9H788 454 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms