RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 GREB1LQ9C091 1923 aaPredicted RBP21.01■□□□□ 0.95
NUP50-208ENST00000430547 MYH4Q9Y623 1939 aa21.01■□□□□ 0.95
NUP50-208ENST00000430547 SMC5Q8IY18 1101 aa21■□□□□ 0.95
NUP50-208ENST00000430547 IFNL3Q8IZI9 196 aa21■□□□□ 0.95
NUP50-208ENST00000430547 NUDT12Q9BQG2 462 aa21■□□□□ 0.95
NUP50-208ENST00000430547 NAPBQ9H115 298 aa21■□□□□ 0.95
NUP50-208ENST00000430547 EPB41L4AQ9HCS5 686 aaPredicted RBP21■□□□□ 0.95
NUP50-208ENST00000430547 TMX2Q9Y320 296 aa21■□□□□ 0.95
NUP50-208ENST00000430547 PARP14Q460N5 1801 aa20.99■□□□□ 0.95
NUP50-208ENST00000430547 WDR78Q5VTH9 848 aa20.99■□□□□ 0.95
NUP50-208ENST00000430547 LBX2Q6XYB7 198 aa20.99■□□□□ 0.95
NUP50-208ENST00000430547 VCPKMTQ9H867 229 aa20.99■□□□□ 0.95
NUP50-208ENST00000430547 RLFQ13129 1914 aa20.98■□□□□ 0.95
NUP50-208ENST00000430547 SPDYE16A6NNV3 312 aaPredicted RBP20.98■□□□□ 0.95
NUP50-208ENST00000430547 RAD21O60216 631 aa20.98■□□□□ 0.95
NUP50-208ENST00000430547 HMGCRP04035 888 aa20.98■□□□□ 0.95
NUP50-208ENST00000430547 GJB1P08034 283 aa20.98■□□□□ 0.95
NUP50-208ENST00000430547 SLC3A2P08195 630 aaKnown RBP20.98■□□□□ 0.95
NUP50-208ENST00000430547 EEF2P13639 858 aaKnown RBP20.98■□□□□ 0.95
NUP50-208ENST00000430547 COG2Q14746 738 aa20.98■□□□□ 0.95
NUP50-208ENST00000430547 Q3C1V9 767 aa20.98■□□□□ 0.95
NUP50-208ENST00000430547 GPR142Q7Z601 462 aa20.98■□□□□ 0.95
NUP50-208ENST00000430547 SPICE1Q8N0Z3 855 aa20.98■□□□□ 0.95
NUP50-208ENST00000430547 UNC93B1Q9H1C4 597 aa20.98■□□□□ 0.95
NUP50-208ENST00000430547 PORCNQ9H237 461 aa20.98■□□□□ 0.95
NUP50-208ENST00000430547 GOPCQ9HD26 462 aa20.98■□□□□ 0.95
NUP50-208ENST00000430547 HOXC10Q9NYD6 342 aa20.98■□□□□ 0.95
NUP50-208ENST00000430547 GJD2Q9UKL4 321 aa20.98■□□□□ 0.95
NUP50-208ENST00000430547 A0A0G2JMZ2 1700 aa20.98■□□□□ 0.95
NUP50-208ENST00000430547 TRIM6-TRIM34B2RNG4 842 aa20.97■□□□□ 0.95
NUP50-208ENST00000430547 CYP2B6P20813 491 aa20.97■□□□□ 0.95
NUP50-208ENST00000430547 RASA1P20936 1047 aa20.97■□□□□ 0.95
NUP50-208ENST00000430547 GJA8P48165 433 aa20.97■□□□□ 0.95
NUP50-208ENST00000430547 PRPF38BQ5VTL8 546 aaKnown RBP20.97■□□□□ 0.95
NUP50-208ENST00000430547 PLEKHH3Q7Z736 793 aa20.97■□□□□ 0.95
NUP50-208ENST00000430547 CHD1LQ86WJ1 897 aa20.97■□□□□ 0.95
NUP50-208ENST00000430547 ZNF444Q8N0Y2 327 aaPredicted RBP20.97■□□□□ 0.95
NUP50-208ENST00000430547 MKI67P46013 3256 aaKnown RBP20.96■□□□□ 0.95
NUP50-208ENST00000430547 WDR46O15213 610 aaKnown RBP20.96■□□□□ 0.95
NUP50-208ENST00000430547 CNMDO75829 334 aa20.96■□□□□ 0.95
NUP50-208ENST00000430547 FLOT1O75955 427 aa20.96■□□□□ 0.95
NUP50-208ENST00000430547 IGHDP01880 384 aa20.96■□□□□ 0.95
NUP50-208ENST00000430547 RGS2P41220 211 aa20.96■□□□□ 0.95
NUP50-208ENST00000430547 PDE4BQ07343 736 aa20.96■□□□□ 0.95
NUP50-208ENST00000430547 SIAH1Q8IUQ4 282 aa20.96■□□□□ 0.95
NUP50-208ENST00000430547 IVNS1ABPQ9Y6Y0 642 aa20.96■□□□□ 0.95
NUP50-208ENST00000430547 COL11A1P12107 1806 aaPredicted RBP20.96■□□□□ 0.95
NUP50-208ENST00000430547 KIAA1755Q5JYT7 1200 aa20.95■□□□□ 0.94
NUP50-208ENST00000430547 POTEEQ6S8J3 1075 aa20.95■□□□□ 0.94
NUP50-208ENST00000430547 SAMD1Q6SPF0 538 aaPredicted RBP20.95■□□□□ 0.94
NUP50-208ENST00000430547 CCDC129Q6ZRS4 1044 aa20.95■□□□□ 0.94
NUP50-208ENST00000430547 TRMT44Q8IYL2 757 aaKnown RBP20.95■□□□□ 0.94
NUP50-208ENST00000430547 U2AF1L4Q8WU68 220 aaKnown RBP20.95■□□□□ 0.94
NUP50-208ENST00000430547 BTBD7Q9P203 1132 aa20.95■□□□□ 0.94
NUP50-208ENST00000430547 PRDM1O75626 825 aa20.94■□□□□ 0.94
NUP50-208ENST00000430547 ZKSCAN1P17029 563 aaPredicted RBP20.94■□□□□ 0.94
NUP50-208ENST00000430547 NUCB1Q02818 461 aa20.94■□□□□ 0.94
NUP50-208ENST00000430547 MB21D1Q8N884 522 aa20.94■□□□□ 0.94
NUP50-208ENST00000430547 RILPL2Q969X0 211 aa20.94■□□□□ 0.94
NUP50-208ENST00000430547 SHISA4Q96DD7 197 aa20.94■□□□□ 0.94
NUP50-208ENST00000430547 HELLSQ9NRZ9 838 aa20.94■□□□□ 0.94
NUP50-208ENST00000430547 XRCC5P13010 732 aaKnown RBP20.93■□□□□ 0.94
NUP50-208ENST00000430547 DSG3P32926 999 aa20.93■□□□□ 0.94
NUP50-208ENST00000430547 PPARAQ07869 468 aa20.93■□□□□ 0.94
NUP50-208ENST00000430547 PLS1Q14651 629 aa20.93■□□□□ 0.94
NUP50-208ENST00000430547 TICAM2Q86XR7 235 aa20.93■□□□□ 0.94
NUP50-208ENST00000430547 TRIB2Q92519 343 aa20.93■□□□□ 0.94
NUP50-208ENST00000430547 DEFB118Q96PH6 123 aa20.93■□□□□ 0.94
NUP50-208ENST00000430547 APBA2Q99767 749 aa20.93■□□□□ 0.94
NUP50-208ENST00000430547 SGPL1O95470 568 aa20.92■□□□□ 0.94
NUP50-208ENST00000430547 TSPY3P0CV98 308 aa20.92■□□□□ 0.94
NUP50-208ENST00000430547 TSPY8P0CW00 308 aa20.92■□□□□ 0.94
NUP50-208ENST00000430547 CAPN2P17655 700 aa20.92■□□□□ 0.94
NUP50-208ENST00000430547 MORN1Q5T089 497 aa20.92■□□□□ 0.94
NUP50-208ENST00000430547 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.92■□□□□ 0.94
NUP50-208ENST00000430547 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.92■□□□□ 0.941e-8■■■■■ 27
NUP50-208ENST00000430547 HMX1Q9NP08 348 aaPredicted RBP20.92■□□□□ 0.94
NUP50-208ENST00000430547 NYAP2Q9P242 653 aa20.92■□□□□ 0.94
NUP50-208ENST00000430547 SLC15A5A6NIM6 579 aa20.91■□□□□ 0.94
NUP50-208ENST00000430547 TFRCP02786 760 aaKnown RBP20.91■□□□□ 0.94
NUP50-208ENST00000430547 MAP2K5Q13163 448 aa20.91■□□□□ 0.94
NUP50-208ENST00000430547 MCMDC2Q4G0Z9 681 aa20.91■□□□□ 0.94
NUP50-208ENST00000430547 RPTORQ8N122 1335 aa20.91■□□□□ 0.94
NUP50-208ENST00000430547 ATG4CQ96DT6 458 aa20.91■□□□□ 0.94
NUP50-208ENST00000430547 SPATC1LQ9H0A9 340 aa20.91■□□□□ 0.94
NUP50-208ENST00000430547 PAK6Q9NQU5 681 aaPredicted RBP20.91■□□□□ 0.94
NUP50-208ENST00000430547 ZNF236Q9UL36 1845 aa20.9■□□□□ 0.94
NUP50-208ENST00000430547 PTPREP23469 700 aa20.9■□□□□ 0.94
NUP50-208ENST00000430547 IRX6P78412 446 aaPredicted RBP20.9■□□□□ 0.94
NUP50-208ENST00000430547 FAM83BQ5T0W9 1011 aa20.9■□□□□ 0.94
NUP50-208ENST00000430547 PLEKHM2Q8IWE5 1019 aa20.9■□□□□ 0.94
NUP50-208ENST00000430547 USP6NLQ92738 828 aa20.9■□□□□ 0.94
NUP50-208ENST00000430547 FAM227BQ96M60 508 aa20.9■□□□□ 0.94
NUP50-208ENST00000430547 MOV10L1Q9BXT6 1211 aaKnown RBP20.9■□□□□ 0.94
NUP50-208ENST00000430547 CLIP2Q9UDT6 1046 aa20.9■□□□□ 0.94
NUP50-208ENST00000430547 A0A0D9SFI3 127 aa20.89■□□□□ 0.93
NUP50-208ENST00000430547 FARP2O94887 1054 aaPredicted RBP20.89■□□□□ 0.93
NUP50-208ENST00000430547 PRKAR2AP13861 404 aaKnown RBP20.89■□□□□ 0.93
NUP50-208ENST00000430547 TRIM32Q13049 653 aa20.89■□□□□ 0.93
NUP50-208ENST00000430547 SHCBP1Q8NEM2 672 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms