RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 RPS8P62241 208 aaKnown RBP16.31■□□□□ 0.2
MSH5-206ENST00000423982 NR1I3Q14994 352 aa16.31■□□□□ 0.2
MSH5-206ENST00000423982 TMEM67Q5HYA8 995 aa16.31■□□□□ 0.2
MSH5-206ENST00000423982 NOSTRINQ8IVI9 506 aa16.31■□□□□ 0.2
MSH5-206ENST00000423982 VGLL2Q8N8G2 317 aa16.31■□□□□ 0.2
MSH5-206ENST00000423982 FBXO2Q9UK22 296 aaPredicted RBP16.31■□□□□ 0.2
MSH5-206ENST00000423982 MORC3Q14149 939 aa16.3■□□□□ 0.2
MSH5-206ENST00000423982 DIS3L2Q8IYB7 885 aaKnown RBP16.3■□□□□ 0.2
MSH5-206ENST00000423982 OXER1Q8TDS5 423 aa16.3■□□□□ 0.2
MSH5-206ENST00000423982 VPS18Q9P253 973 aa16.3■□□□□ 0.2
MSH5-206ENST00000423982 GOLGA6L9A6NEM1 432 aa16.3■□□□□ 0.2
MSH5-206ENST00000423982 CDKL5O76039 1030 aa16.3■□□□□ 0.2
MSH5-206ENST00000423982 RHOXF2BP0C7M4 288 aa16.3■□□□□ 0.2
MSH5-206ENST00000423982 ADD2P35612 726 aa16.3■□□□□ 0.2
MSH5-206ENST00000423982 C10orf67Q8IYJ2 551 aa16.3■□□□□ 0.2
MSH5-206ENST00000423982 ENOX1Q8TC92 643 aaKnown RBP16.3■□□□□ 0.2
MSH5-206ENST00000423982 RHOXF2Q9BQY4 288 aa16.3■□□□□ 0.2
MSH5-206ENST00000423982 ADGRG1Q9Y653 693 aa16.3■□□□□ 0.2
MSH5-206ENST00000423982 FAM205CA6NFA0 338 aa16.29■□□□□ 0.2
MSH5-206ENST00000423982 CCDC175P0C221 793 aa16.29■□□□□ 0.2
MSH5-206ENST00000423982 CD44P16070 742 aaKnown RBP16.29■□□□□ 0.2
MSH5-206ENST00000423982 AFMP43652 599 aa16.29■□□□□ 0.2
MSH5-206ENST00000423982 SARSP49591 514 aaKnown RBP16.29■□□□□ 0.2
MSH5-206ENST00000423982 ZNF569Q5MCW4 686 aa16.29■□□□□ 0.2
MSH5-206ENST00000423982 CPLX2Q6PUV4 134 aaKnown RBP16.29■□□□□ 0.2
MSH5-206ENST00000423982 GPR101Q96P66 508 aaPredicted RBP16.29■□□□□ 0.2
MSH5-206ENST00000423982 AKAP2Q9Y2D5 859 aa16.29■□□□□ 0.2
MSH5-206ENST00000423982 ZNF532Q9HCE3 1301 aa16.29■□□□□ 0.2
MSH5-206ENST00000423982 A0A087X0B3 334 aa16.29■□□□□ 0.2
MSH5-206ENST00000423982 AKR1B15C9JRZ8 316 aaPredicted RBP16.29■□□□□ 0.2
MSH5-206ENST00000423982 R3HDM1Q15032 1099 aaKnown RBP16.29■□□□□ 0.2
MSH5-206ENST00000423982 FOXR1Q6PIV2 292 aa16.29■□□□□ 0.2
MSH5-206ENST00000423982 APTXQ7Z2E3 356 aaKnown RBP16.29■□□□□ 0.2
MSH5-206ENST00000423982 PLCD3Q8N3E9 789 aa16.29■□□□□ 0.2
MSH5-206ENST00000423982 ACRBPQ8NEB7 543 aa16.29■□□□□ 0.2
MSH5-206ENST00000423982 ZSWIM5Q9P217 1185 aa16.29■□□□□ 0.2
MSH5-206ENST00000423982 ZNF219Q9P2Y4 722 aaPredicted RBP16.29■□□□□ 0.2
MSH5-206ENST00000423982 MINPP1Q9UNW1 487 aa16.29■□□□□ 0.2
MSH5-206ENST00000423982 MYH7P12883 1935 aa16.29■□□□□ 0.2
MSH5-206ENST00000423982 MROH5Q6ZUA9 1318 aa16.29■□□□□ 0.2
MSH5-206ENST00000423982 MAP2K7O14733 419 aa16.28■□□□□ 0.2
MSH5-206ENST00000423982 HMGB2P26583 209 aaKnown RBP16.28■□□□□ 0.2
MSH5-206ENST00000423982 KLRK1P26718 216 aa16.28■□□□□ 0.2
MSH5-206ENST00000423982 PHKA1P46020 1223 aa16.28■□□□□ 0.2
MSH5-206ENST00000423982 PUM3Q15397 648 aaKnown RBP16.28■□□□□ 0.2
MSH5-206ENST00000423982 MUM1L1Q5H9M0 696 aa16.28■□□□□ 0.2
MSH5-206ENST00000423982 SRGAP1Q7Z6B7 1085 aa16.28■□□□□ 0.2
MSH5-206ENST00000423982 IGSF22Q8N9C0 903 aa16.28■□□□□ 0.2
MSH5-206ENST00000423982 ATF5Q9Y2D1 282 aaPredicted RBP16.28■□□□□ 0.2
MSH5-206ENST00000423982 CCDC151A5D8V7 595 aa16.28■□□□□ 0.2
MSH5-206ENST00000423982 PHACTR2O75167 634 aa16.28■□□□□ 0.2
MSH5-206ENST00000423982 SSRP1Q08945 709 aaKnown RBP16.28■□□□□ 0.2
MSH5-206ENST00000423982 GPS2Q13227 327 aa16.28■□□□□ 0.2
MSH5-206ENST00000423982 RRP12Q5JTH9 1297 aaKnown RBP16.28■□□□□ 0.2
MSH5-206ENST00000423982 BEND6Q5SZJ8 279 aaPredicted RBP16.28■□□□□ 0.2
MSH5-206ENST00000423982 MLKLQ8NB16 471 aa16.28■□□□□ 0.2
MSH5-206ENST00000423982 STAMQ92783 540 aa16.28■□□□□ 0.2
MSH5-206ENST00000423982 CSRNP2Q9H175 543 aa16.28■□□□□ 0.2
MSH5-206ENST00000423982 ABCB6Q9NP58 842 aa16.28■□□□□ 0.2
MSH5-206ENST00000423982 LAMB2P55268 1798 aa16.28■□□□□ 0.2
MSH5-206ENST00000423982 A0A1B0GTH6 734 aa16.27■□□□□ 0.2
MSH5-206ENST00000423982 IFIT3O14879 490 aaKnown RBP16.27■□□□□ 0.2
MSH5-206ENST00000423982 ACTN4O43707 911 aaKnown RBP16.27■□□□□ 0.2
MSH5-206ENST00000423982 PTPREP23469 700 aa16.27■□□□□ 0.2
MSH5-206ENST00000423982 CDC25AP30304 524 aa16.27■□□□□ 0.2
MSH5-206ENST00000423982 BSDC1Q9NW68 430 aaPredicted RBP16.27■□□□□ 0.2
MSH5-206ENST00000423982 ANKIB1Q9P2G1 1089 aa16.27■□□□□ 0.2
MSH5-206ENST00000423982 SLC12A7Q9Y666 1083 aa16.27■□□□□ 0.2
MSH5-206ENST00000423982 WDR19Q8NEZ3 1342 aa16.27■□□□□ 0.2
MSH5-206ENST00000423982 AKAP11Q9UKA4 1901 aa16.27■□□□□ 0.2
MSH5-206ENST00000423982 MMP1P03956 469 aa16.27■□□□□ 0.19
MSH5-206ENST00000423982 BCAMP50895 628 aa16.27■□□□□ 0.19
MSH5-206ENST00000423982 TICAM2Q86XR7 235 aa16.27■□□□□ 0.19
MSH5-206ENST00000423982 UPF1Q92900 1129 aaKnown RBP eCLIP16.27■□□□□ 0.19
MSH5-206ENST00000423982 EPSTI1Q96J88 318 aa16.27■□□□□ 0.19
MSH5-206ENST00000423982 FBXO3Q9UK99 471 aa16.27■□□□□ 0.19
MSH5-206ENST00000423982 MYH8P13535 1937 aa16.27■□□□□ 0.19
MSH5-206ENST00000423982 MYO1BO43795 1136 aa16.26■□□□□ 0.19
MSH5-206ENST00000423982 CASP14P31944 242 aa16.26■□□□□ 0.19
MSH5-206ENST00000423982 GYG1P46976 350 aa16.26■□□□□ 0.19
MSH5-206ENST00000423982 NT5DC1Q5TFE4 455 aa16.26■□□□□ 0.19
MSH5-206ENST00000423982 SLC35F6Q8N357 371 aa16.26■□□□□ 0.19
MSH5-206ENST00000423982 ZNF622Q969S3 477 aaKnown RBP eCLIP16.26■□□□□ 0.199e-12■□□□□ 10.4
MSH5-206ENST00000423982 EPB41L4AQ9HCS5 686 aaPredicted RBP16.26■□□□□ 0.19
MSH5-206ENST00000423982 PPP1R1BQ9UD71 204 aaPredicted RBP16.26■□□□□ 0.19
MSH5-206ENST00000423982 CASZ1Q86V15 1759 aa16.26■□□□□ 0.19
MSH5-206ENST00000423982 RTL9Q8NET4 1388 aa16.26■□□□□ 0.19
MSH5-206ENST00000423982 hCG_1642624A0A1W2PR95 340 aa16.26■□□□□ 0.19
MSH5-206ENST00000423982 RNF225M0QZC1 329 aaPredicted RBP16.26■□□□□ 0.19
MSH5-206ENST00000423982 MYO1CO00159 1063 aa16.26■□□□□ 0.19
MSH5-206ENST00000423982 CHRNA5P30532 468 aa16.26■□□□□ 0.19
MSH5-206ENST00000423982 FXR1P51114 621 aaKnown RBP eCLIP16.26■□□□□ 0.19
MSH5-206ENST00000423982 VSNL1P62760 191 aa16.26■□□□□ 0.19
MSH5-206ENST00000423982 KIF4BQ2VIQ3 1234 aa16.26■□□□□ 0.19
MSH5-206ENST00000423982 TOMM22Q9NS69 142 aa16.26■□□□□ 0.19
MSH5-206ENST00000423982 JAG2Q9Y219 1238 aa16.26■□□□□ 0.19
MSH5-206ENST00000423982 FAN1Q9Y2M0 1017 aa16.26■□□□□ 0.19
MSH5-206ENST00000423982 PLCD1P51178 756 aa16.25■□□□□ 0.19
MSH5-206ENST00000423982 LPIN2Q92539 896 aa16.25■□□□□ 0.19
MSH5-206ENST00000423982 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.25■□□□□ 0.191e-12■■■■□ 21.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms