RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 NTSR2O95665 410 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 FOSP01100 380 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-202ENST00000409915 ST5P78524 1137 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 PPP2R5AQ15172 486 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 GPR162Q16538 588 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 ERFEQ4G0M1 354 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 SUSD4Q5VX71 490 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 PDXDC2PQ6P474 469 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 C2CD5Q86YS7 1000 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 JAMLQ86YT9 394 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 ZNF34Q8IZ26 560 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 SYNE4Q8N205 404 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 PLBD2Q8NHP8 589 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 SECISBP2LQ93073 1101 aaKnown RBP5.49□□□□□ -1.53
SF3B1-202ENST00000409915 ZNF775Q96BV0 537 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-202ENST00000409915 MRGPRX2Q96LB1 330 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 CSRNP1Q96S65 589 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 DNAJC7Q99615 494 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 FEZ1Q99689 392 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 MYD88Q99836 296 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 TOR4AQ9NXH8 423 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 BCS1LQ9Y276 419 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 MAP3K2Q9Y2U5 619 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 ANKRD36CQ5JPF3 1778 aa5.49□□□□□ -1.53
SF3B1-202ENST00000409915 PI4KAP2A4QPH2 592 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 F6X3S4 739 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 J3QL48 77 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 MYL1P05976 194 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 KCNA3P22001 575 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 CNGA1P29973 690 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 CTHP32929 405 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 POU5F1BQ06416 359 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 SLC20A2Q08357 652 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 TCIRG1Q13488 830 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 NFE2Q16621 373 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-202ENST00000409915 CWF19L2Q2TBE0 894 aaKnown RBP5.48□□□□□ -1.53
SF3B1-202ENST00000409915 TTC39BQ5VTQ0 682 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-202ENST00000409915 C16orf86Q6ZW13 317 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 PCGF5Q86SE9 256 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 NLRP10Q86W26 655 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 PI4KAP1Q8N8J0 262 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 ADAM32Q8TC27 787 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 PPM1EQ8WY54 764 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 SSH1Q8WYL5 1049 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 JARID2Q92833 1246 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-202ENST00000409915 ARNT2Q9HBZ2 717 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 CHST12Q9NRB3 414 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 TMEM260Q9NX78 707 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 MAP3K20Q9NYL2 800 aaKnown RBP5.48□□□□□ -1.53
SF3B1-202ENST00000409915 R3HCC1Q9Y3T6 440 aaKnown RBP5.48□□□□□ -1.53
SF3B1-202ENST00000409915 ZBED9Q6R2W3 1325 aa5.48□□□□□ -1.53
SF3B1-202ENST00000409915 IBTKQ9P2D0 1353 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-202ENST00000409915 NRDCO43847 1150 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 ALDH1L1O75891 902 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 KIF20AO95235 890 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 DDX58O95786 925 aaKnown RBP5.47□□□□□ -1.53
SF3B1-202ENST00000409915 BPNT1O95861 308 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 FGAP02671 866 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 IGKV5-2P06315 115 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 TGFB2P61812 414 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 IFRD2Q12894 506 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-202ENST00000409915 TAF1CQ15572 869 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-202ENST00000409915 TKFCQ3LXA3 575 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 LINC01559Q495D7 138 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 PARP10Q53GL7 1025 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 HSP90AB3PQ58FF7 597 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 MEI1Q5TIA1 1274 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 TAF3Q5VWG9 929 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 KSR2Q6VAB6 950 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 TPTE2Q6XPS3 522 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 ERMP1Q7Z2K6 904 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 KRT26Q7Z3Y9 468 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 MTERF4Q7Z6M4 381 aaKnown RBP5.47□□□□□ -1.53
SF3B1-202ENST00000409915 TRMT2AQ8IZ69 625 aaKnown RBP5.47□□□□□ -1.53
SF3B1-202ENST00000409915 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.47□□□□□ -1.53
SF3B1-202ENST00000409915 SCG3Q8WXD2 468 aaKnown RBP5.47□□□□□ -1.53
SF3B1-202ENST00000409915 ANP32BQ92688 251 aaKnown RBP5.47□□□□□ -1.53
SF3B1-202ENST00000409915 FRAT1Q92837 279 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-202ENST00000409915 ZNF622Q969S3 477 aaKnown RBP eCLIP5.47□□□□□ -1.533e-7■■□□□ 14.4
SF3B1-202ENST00000409915 FAM89AQ96GI7 184 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 SPON2Q9BUD6 331 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 ISCA1Q9BUE6 129 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 METTL22Q9BUU2 404 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-202ENST00000409915 UTP14AQ9BVJ6 771 aaKnown RBP5.47□□□□□ -1.53
SF3B1-202ENST00000409915 BRIP1Q9BX63 1249 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 FAM126AQ9BYI3 521 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-202ENST00000409915 COPRSQ9NQ92 184 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 AVENQ9NQS1 362 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-202ENST00000409915 SMC4Q9NTJ3 1288 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 STIM2Q9P246 746 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 TRMT112Q9UI30 125 aaKnown RBP5.47□□□□□ -1.53
SF3B1-202ENST00000409915 ATP8A1Q9Y2Q0 1164 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 BRCA1P38398 1863 aaKnown RBP5.47□□□□□ -1.53
SF3B1-202ENST00000409915 COL4A1P02462 1669 aa5.47□□□□□ -1.53
SF3B1-202ENST00000409915 CFAP69A5D8W1 941 aa5.46□□□□□ -1.54
SF3B1-202ENST00000409915 H0YIN7 160 aa5.46□□□□□ -1.54
SF3B1-202ENST00000409915 WNT7AO00755 349 aa5.46□□□□□ -1.54
SF3B1-202ENST00000409915 OPLAHO14841 1288 aa5.46□□□□□ -1.54
SF3B1-202ENST00000409915 CCNYL3P0C7X3 344 aa5.46□□□□□ -1.54
SF3B1-202ENST00000409915 SRGNP10124 158 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms