RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 RRP36Q96EU6 259 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 CPSF2Q9P2I0 782 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 DBNLQ9UJU6 430 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 POLR2DO15514 142 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 KRT9P35527 623 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 XRCC4Q13426 336 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 ZNF827Q17R98 1081 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 GLE1Q53GS7 698 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 KRT40Q6A162 431 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 CHST3Q7LGC8 479 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 CCDC47Q96A33 483 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 TSGA10Q9BZW7 698 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 LIMA1Q9UHB6 759 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 SERTAD1Q9UHV2 236 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 HPS5Q9UPZ3 1129 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 N4BP3O15049 544 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 MGRN1O60291 552 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 IPO7O95373 1038 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 VAV2P52735 878 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 HDLBPQ00341 1268 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 C2orf54Q08AI8 447 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 TRAF1Q13077 416 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 LACTB2Q53H82 288 aaPredicted RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 ANKRD20A8PQ5CZ79 823 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 CRELD2Q6UXH1 353 aaPredicted RBP6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 TTLL7Q6ZT98 887 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 FAM228AQ86W67 206 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 CCDC26Q8TAB7 109 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 AIDAQ96BJ3 306 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 CYFIP2Q96F07 1278 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 ZIM3Q96PE6 472 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 JADE2Q9NQC1 790 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 STIM2Q9P246 746 aa6.53□□□□□ -1.36
R3HDM1-202ENST00000409478 USP6P35125 1406 aa6.52□□□□□ -1.36
R3HDM1-202ENST00000409478 NCKAP5LQ9HCH0 1330 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 LRRC10BA6NIK2 292 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 E7EVH7 732 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 DNAJC8O75937 253 aaPredicted RBP6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 DDX58O95786 925 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 IDEP14735 1019 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 PRLRP16471 622 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 GUCY1A3Q02108 690 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 CUL4BQ13620 913 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 ZMYM1Q5SVZ6 1142 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 CFAP58Q5T655 872 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 NBPF5PQ86XG9 351 aaPredicted RBP6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 RASSF8Q8NHQ8 419 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 CNKSR2Q8WXI2 1034 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 SPDL1Q96EA4 605 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 CALR3Q96L12 384 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 REXO2Q9Y3B8 237 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 FRMD3A2A2Y4 597 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 PRC1O43663 620 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 SNUPNO95149 360 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 GHRP10912 638 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 CYLC1P35663 651 aaPredicted RBP6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 E2F5Q15329 346 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 IMMTQ16891 758 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 MSL1Q68DK7 614 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 CDCA2Q69YH5 1023 aaPredicted RBP6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 DDX46Q7L014 1031 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 OR8K1Q8NGG5 319 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 KAZALD1Q96I82 304 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 COPRSQ9NQ92 184 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 A0A0G2JS52 829 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 MPHOSPH10O00566 681 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 LIN7AO14910 233 aaPredicted RBP6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 BUB1BO60566 1050 aaPredicted RBP6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 ECM2O94769 699 aaPredicted RBP6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 PTPREP23469 700 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 PRPHP41219 470 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 PDCD2Q16342 344 aaPredicted RBP6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 CWF19L2Q2TBE0 894 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 ATP6V1G3Q96LB4 118 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 EBF2Q9HAK2 575 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 GJB4Q9NTQ9 266 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 HAUS2Q9NVX0 235 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 TRIM10Q9UDY6 481 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 CEP131Q9UPN4 1083 aa6.52□□□□□ -1.37
R3HDM1-202ENST00000409478 GOLGA6L10A6NI86 522 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 ACTN4O43707 911 aaKnown RBP6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 PECAM1P16284 738 aaPredicted RBP6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 IBSPP21815 317 aaPredicted RBP6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 KCTD16Q68DU8 428 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 IFT20Q8IY31 132 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 MREGQ8N565 214 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 TSEN2Q8NCE0 465 aaKnown RBP6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 NCOA7Q8NI08 942 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 LMBR1Q8WVP7 490 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 GSDMAQ96QA5 445 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 DNAJC7Q99615 494 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 KIF9Q9HAQ2 790 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 ACEP12821 1306 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 UBN2Q6ZU65 1347 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 TECPR2O15040 1411 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 PTPRUQ92729 1446 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 PLEKHG3A1L390 1219 aa6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 SSBP05455 408 aaKnown RBP eCLIP6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 RPSAP08865 295 aaKnown RBP6.51□□□□□ -1.37
R3HDM1-202ENST00000409478 SCTRP47872 440 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms