RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 EYA1Q99502 592 aa14.33□□□□□ -0.11
HERC3-203ENST00000407637 HPS5Q9UPZ3 1129 aa14.33□□□□□ -0.11
HERC3-203ENST00000407637 MAP3K2Q9Y2U5 619 aa14.33□□□□□ -0.11
HERC3-203ENST00000407637 EPN1Q9Y6I3 576 aaPredicted RBP14.33□□□□□ -0.11
HERC3-203ENST00000407637 EPHB4P54760 987 aa14.33□□□□□ -0.12
HERC3-203ENST00000407637 SNX1Q13596 522 aa14.33□□□□□ -0.12
HERC3-203ENST00000407637 SPATA1Q5VX52 437 aa14.33□□□□□ -0.12
HERC3-203ENST00000407637 SAAL1Q96ER3 474 aa14.33□□□□□ -0.12
HERC3-203ENST00000407637 STAMBPL1Q96FJ0 436 aa14.33□□□□□ -0.12
HERC3-203ENST00000407637 C4AP0C0L4 1744 aa14.33□□□□□ -0.12
HERC3-203ENST00000407637 C4BP0C0L5 1744 aa14.33□□□□□ -0.12
HERC3-203ENST00000407637 ECM29Q5VYK3 1845 aa14.33□□□□□ -0.12
HERC3-203ENST00000407637 ITIH6Q6UXX5 1313 aa14.33□□□□□ -0.12
HERC3-203ENST00000407637 MYO5AQ9Y4I1 1855 aaKnown RBP14.32□□□□□ -0.12
HERC3-203ENST00000407637 COBLO75128 1261 aa14.32□□□□□ -0.12
HERC3-203ENST00000407637 CD44P16070 742 aaKnown RBP14.32□□□□□ -0.12
HERC3-203ENST00000407637 ATP5JP18859 108 aa14.32□□□□□ -0.12
HERC3-203ENST00000407637 CDC25CP30307 473 aa14.32□□□□□ -0.12
HERC3-203ENST00000407637 KRT9P35527 623 aa14.32□□□□□ -0.12
HERC3-203ENST00000407637 HERVK_113P62684 666 aa14.32□□□□□ -0.12
HERC3-203ENST00000407637 MYO1EQ12965 1108 aa14.32□□□□□ -0.12
HERC3-203ENST00000407637 RBBP5Q15291 538 aaKnown RBP14.32□□□□□ -0.12
HERC3-203ENST00000407637 CDKAL1Q5VV42 579 aa14.32□□□□□ -0.12
HERC3-203ENST00000407637 NSMCE1Q8WV22 266 aa14.32□□□□□ -0.12
HERC3-203ENST00000407637 HAUS4Q9H6D7 363 aa14.32□□□□□ -0.12
HERC3-203ENST00000407637 PPANQ9NQ55 473 aaKnown RBP14.32□□□□□ -0.12
HERC3-203ENST00000407637 GGA2Q9UJY4 613 aa14.32□□□□□ -0.12
HERC3-203ENST00000407637 ZBTB12Q9Y330 459 aaPredicted RBP14.32□□□□□ -0.12
HERC3-203ENST00000407637 NALCNQ8IZF0 1738 aa14.32□□□□□ -0.12
HERC3-203ENST00000407637 BUB1BO60566 1050 aaPredicted RBP14.32□□□□□ -0.12
HERC3-203ENST00000407637 ERCC5P28715 1186 aaPredicted RBP14.32□□□□□ -0.12
HERC3-203ENST00000407637 RBM5P52756 815 aaKnown RBP eCLIP14.32□□□□□ -0.12
HERC3-203ENST00000407637 STK11IPQ8N1F8 1099 aa14.32□□□□□ -0.12
HERC3-203ENST00000407637 HOOK2Q96ED9 719 aa14.32□□□□□ -0.12
HERC3-203ENST00000407637 JADE2Q9NQC1 790 aa14.32□□□□□ -0.12
HERC3-203ENST00000407637 CCDC9Q9Y3X0 531 aaKnown RBP14.32□□□□□ -0.12
HERC3-203ENST00000407637 CCDC61Q9Y6R9 512 aa14.32□□□□□ -0.12
HERC3-203ENST00000407637 RFX7Q2KHR2 1363 aa14.32□□□□□ -0.12
HERC3-203ENST00000407637 MYH13Q9UKX3 1938 aa14.32□□□□□ -0.12
HERC3-203ENST00000407637 MDH1P40925 334 aaKnown RBP14.31□□□□□ -0.12
HERC3-203ENST00000407637 MATR3P43243 847 aaKnown RBP eCLIP14.31□□□□□ -0.12
HERC3-203ENST00000407637 SCTRP47872 440 aa14.31□□□□□ -0.12
HERC3-203ENST00000407637 IQCEQ6IPM2 695 aa14.31□□□□□ -0.12
HERC3-203ENST00000407637 BZW1Q7L1Q6 419 aaKnown RBP14.31□□□□□ -0.12
HERC3-203ENST00000407637 NBPF5PQ86XG9 351 aaPredicted RBP14.31□□□□□ -0.12
HERC3-203ENST00000407637 CTAGE1Q96RT6 745 aa14.31□□□□□ -0.12
HERC3-203ENST00000407637 SH3TC1Q8TE82 1336 aa14.31□□□□□ -0.12
HERC3-203ENST00000407637 ZNF233A6NK53 670 aa14.31□□□□□ -0.12
HERC3-203ENST00000407637 CSB-PGBD3P0DP91 1061 aa14.31□□□□□ -0.12
HERC3-203ENST00000407637 IDEP14735 1019 aa14.31□□□□□ -0.12
HERC3-203ENST00000407637 ZC3H12AQ5D1E8 599 aaKnown RBP14.31□□□□□ -0.12
HERC3-203ENST00000407637 EMBQ6PCB8 327 aa14.31□□□□□ -0.12
HERC3-203ENST00000407637 KIAA1328Q86T90 577 aa14.31□□□□□ -0.12
HERC3-203ENST00000407637 SMYD4Q8IYR2 804 aaPredicted RBP14.31□□□□□ -0.12
HERC3-203ENST00000407637 KRI1Q8N9T8 703 aaKnown RBP14.31□□□□□ -0.12
HERC3-203ENST00000407637 TRIML1Q8N9V2 468 aa14.31□□□□□ -0.12
HERC3-203ENST00000407637 OR8K1Q8NGG5 319 aa14.31□□□□□ -0.12
HERC3-203ENST00000407637 CCDC43Q96MW1 224 aaKnown RBP14.31□□□□□ -0.12
HERC3-203ENST00000407637 ALG1Q9BT22 464 aa14.31□□□□□ -0.12
HERC3-203ENST00000407637 NOD2Q9HC29 1040 aa14.31□□□□□ -0.12
HERC3-203ENST00000407637 MRC1P22897 1456 aa14.3□□□□□ -0.12
HERC3-203ENST00000407637 MGRN1O60291 552 aa14.3□□□□□ -0.12
HERC3-203ENST00000407637 ATP6V1G2O95670 118 aa14.3□□□□□ -0.12
HERC3-203ENST00000407637 IFFO1Q0D2I5 559 aa14.3□□□□□ -0.12
HERC3-203ENST00000407637 KRT40Q6A162 431 aa14.3□□□□□ -0.12
HERC3-203ENST00000407637 BATF3Q9NR55 127 aa14.3□□□□□ -0.12
HERC3-203ENST00000407637 BAIAP2L1Q9UHR4 511 aa14.3□□□□□ -0.12
HERC3-203ENST00000407637 PALLDQ8WX93 1383 aa14.3□□□□□ -0.12
HERC3-203ENST00000407637 RPS6KA3P51812 740 aa14.3□□□□□ -0.12
HERC3-203ENST00000407637 CAPRIN2Q6IMN6 1127 aaKnown RBP14.3□□□□□ -0.12
HERC3-203ENST00000407637 DSCC1Q9BVC3 393 aa14.3□□□□□ -0.12
HERC3-203ENST00000407637 NUP58Q9BVL2 599 aa14.3□□□□□ -0.12
HERC3-203ENST00000407637 VPS16Q9H269 839 aa14.3□□□□□ -0.12
HERC3-203ENST00000407637 TRPC6Q9Y210 931 aa14.3□□□□□ -0.12
HERC3-203ENST00000407637 MYH10P35580 1976 aa14.3□□□□□ -0.12
HERC3-203ENST00000407637 N4BP3O15049 544 aa14.29□□□□□ -0.12
HERC3-203ENST00000407637 HSPD1P10809 573 aaKnown RBP14.29□□□□□ -0.12
HERC3-203ENST00000407637 RAB27AP51159 221 aa14.29□□□□□ -0.12
HERC3-203ENST00000407637 CUL4BQ13620 913 aa14.29□□□□□ -0.12
HERC3-203ENST00000407637 KRT31Q15323 416 aa14.29□□□□□ -0.12
HERC3-203ENST00000407637 QPCTQ16769 361 aa14.29□□□□□ -0.12
HERC3-203ENST00000407637 ELOA2Q8IYF1 753 aaPredicted RBP14.29□□□□□ -0.12
HERC3-203ENST00000407637 MMGT1Q8N4V1 131 aa14.29□□□□□ -0.12
HERC3-203ENST00000407637 CAVIN3Q969G5 261 aa14.29□□□□□ -0.12
HERC3-203ENST00000407637 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.29□□□□□ -0.12
HERC3-203ENST00000407637 IGSF1Q8N6C5 1336 aa14.29□□□□□ -0.12
HERC3-203ENST00000407637 PECAM1P16284 738 aaPredicted RBP14.29□□□□□ -0.12
HERC3-203ENST00000407637 HPDP32754 393 aaPredicted RBP14.29□□□□□ -0.12
HERC3-203ENST00000407637 XRCC4Q13426 336 aa14.29□□□□□ -0.12
HERC3-203ENST00000407637 THEMIS2Q5TEJ8 643 aa14.29□□□□□ -0.12
HERC3-203ENST00000407637 OSCARQ8IYS5 282 aa14.29□□□□□ -0.12
HERC3-203ENST00000407637 ZNF526Q8TF50 670 aaPredicted RBP14.29□□□□□ -0.12
HERC3-203ENST00000407637 YIPF3Q9GZM5 350 aa14.29□□□□□ -0.12
HERC3-203ENST00000407637 SMARCAL1Q9NZC9 954 aa14.29□□□□□ -0.12
HERC3-203ENST00000407637 RCCD1A6NED2 376 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 GRM8O00222 908 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 CASP1P29466 404 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 HAND2P61296 217 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 TRAF1Q13077 416 aa14.28□□□□□ -0.12
HERC3-203ENST00000407637 CFAP58Q5T655 872 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms