RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 GPR108Q9NPR9 543 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 GSTTP1A0A1W2PQM5 241 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 GOLGA8KD6RF30 607 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 IGKV5-2P06315 115 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 GBP1P32455 592 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 MTIF2P46199 727 aaKnown RBP6.56□□□□□ -1.36
HDAC9-203ENST00000406072 CUL4AQ13619 759 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 C6orf163Q5TEZ5 329 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 GKAP1Q5VSY0 366 aaPredicted RBP6.56□□□□□ -1.36
HDAC9-203ENST00000406072 Q6ZUG5 572 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 C11orf57Q6ZUT1 292 aaPredicted RBP6.56□□□□□ -1.36
HDAC9-203ENST00000406072 SPATA24Q86W54 205 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 FAM114A1Q8IWE2 563 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 CCDC63Q8NA47 563 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 RHPN1Q8TCX5 695 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 STAG1Q8WVM7 1258 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 UBLCP1Q8WVY7 318 aaPredicted RBP6.56□□□□□ -1.36
HDAC9-203ENST00000406072 CCDC42Q96M95 316 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 PSMB7Q99436 277 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 SLF1Q9BQI6 1058 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 STAP2Q9UGK3 403 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 SERPINA10Q9UK55 444 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 CEP131Q9UPN4 1083 aa6.56□□□□□ -1.36
HDAC9-203ENST00000406072 GOLGA8BA8MQT2 603 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 ADAMTS2O95450 1211 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 DAAM2Q86T65 1068 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 RNF10Q8N5U6 811 aaKnown RBP6.55□□□□□ -1.36
HDAC9-203ENST00000406072 NFE2L3Q9Y4A8 694 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 SAR1BQ9Y6B6 198 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 USH1CQ9Y6N9 552 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 CIAO1O76071 339 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 PTPN21Q16825 1174 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 PROSER3Q2NL68 480 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 TMCO4Q5TGY1 634 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 ZNF513Q8N8E2 541 aaPredicted RBP6.55□□□□□ -1.36
HDAC9-203ENST00000406072 CCDC97Q96F63 343 aaPredicted RBP6.55□□□□□ -1.36
HDAC9-203ENST00000406072 DDX27Q96GQ7 796 aaKnown RBP6.55□□□□□ -1.36
HDAC9-203ENST00000406072 PHAXQ9H814 394 aaKnown RBP6.55□□□□□ -1.36
HDAC9-203ENST00000406072 CCDC87Q9NVE4 849 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 KIAA1468Q9P260 1216 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 MTMR7Q9Y216 660 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 FHOD1Q9Y613 1164 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 AK9Q5TCS8 1911 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 PCCAP05165 728 aaPredicted RBP6.55□□□□□ -1.36
HDAC9-203ENST00000406072 PRR29P0C7W0 189 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 NLRP12P59046 1061 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 MYO1EQ12965 1108 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 GCKRQ14397 625 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 CREB3L3Q68CJ9 461 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 KANK3Q6NY19 840 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 ANKRD13DQ6ZTN6 518 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 PPP1R42Q7Z4L9 355 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 TRIM7Q9C029 511 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 KLC4Q9NSK0 619 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 HMG20BQ9P0W2 317 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 ANKRD31Q8N7Z5 1873 aa6.55□□□□□ -1.36
HDAC9-203ENST00000406072 LOC102724428A0A0B4J2F2 783 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 ZNF202O95125 648 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 CSF1RP07333 972 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 GCFC2P16383 781 aaKnown RBP6.54□□□□□ -1.36
HDAC9-203ENST00000406072 CCT6AP40227 531 aaKnown RBP6.54□□□□□ -1.36
HDAC9-203ENST00000406072 SIK1P57059 783 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 RNASE9P60153 205 aaKnown RBP6.54□□□□□ -1.36
HDAC9-203ENST00000406072 SPAG1Q07617 926 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 TCIRG1Q13488 830 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 SETDB1Q15047 1291 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 PARP10Q53GL7 1025 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 RUFY4Q6ZNE9 571 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 KIF2CQ99661 725 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 MAP3K2Q9Y2U5 619 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 TULP2O00295 520 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 RWDD2BP57060 319 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 SH2D4BQ5SQS7 431 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 RRAGBQ5VZM2 374 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 DZIP1Q86YF9 867 aaKnown RBP6.54□□□□□ -1.36
HDAC9-203ENST00000406072 IFT20Q8IY31 132 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 SEPT12Q8IYM1 358 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 AIDAQ96BJ3 306 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 THOC1Q96FV9 657 aaKnown RBP6.54□□□□□ -1.36
HDAC9-203ENST00000406072 CEP63Q96MT8 703 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 TCHPQ9BT92 498 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 SEPT11Q9NVA2 429 aaKnown RBP6.54□□□□□ -1.36
HDAC9-203ENST00000406072 PSD3Q9NYI0 1048 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 ASAP1Q9ULH1 1129 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 G3BP2Q9UN86 482 aaKnown RBP6.54□□□□□ -1.36
HDAC9-203ENST00000406072 PTPDC1A2A3K4 754 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 EIF4E1BA6NMX2 242 aaKnown RBP6.54□□□□□ -1.36
HDAC9-203ENST00000406072 GRM8O00222 908 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 STX10O60499 249 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 TADA3O75528 432 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 CAMTA2O94983 1202 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 CYP2E1P05181 493 aaPredicted RBP6.54□□□□□ -1.36
HDAC9-203ENST00000406072 KRT9P35527 623 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 RFX5P48382 616 aaPredicted RBP6.54□□□□□ -1.36
HDAC9-203ENST00000406072 UBXN1Q04323 297 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 PDCLQ13371 301 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 SLC10A5Q5PT55 438 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 VSIG1Q86XK7 387 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 TMTC1Q8IUR5 882 aa6.54□□□□□ -1.36
HDAC9-203ENST00000406072 COPRSQ9NQ92 184 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms