RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 ETF1P62495 437 aaKnown RBP16.52■□□□□ 0.23
SFMBT1-201ENST00000394752 KIF5AQ12840 1032 aa16.52■□□□□ 0.23
SFMBT1-201ENST00000394752 GPKOWQ92917 476 aaPredicted RBP eCLIP16.52■□□□□ 0.23
SFMBT1-201ENST00000394752 USP8P40818 1118 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 PRPF4BQ13523 1007 aaKnown RBP16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 KRT79Q5XKE5 535 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 CTR9Q6PD62 1173 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 ZNF512BQ96KM6 892 aaPredicted RBP16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 ALS2CR12Q96Q35 445 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 GOLGA8HP0CJ92 632 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 PLCG2P16885 1265 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 SPATA31A5Q5VU36 1347 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 SPATA31A7Q8IWB4 1347 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 SEMA3EO15041 775 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 PPP1R12BO60237 982 aaPredicted RBP16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 GNA11P29992 359 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 TBC1D9BQ66K14 1250 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 INTS5Q6P9B9 1019 aaKnown RBP16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 ARPP21Q9UBL0 812 aaPredicted RBP16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 WDR19Q8NEZ3 1342 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 KRT86O43790 486 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 PAK1Q13153 545 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 CCDC144BQ3MJ40 725 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 FAM196AQ6ZSG2 479 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 TAX1BP1Q86VP1 789 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 CSGALNACT2Q8N6G5 542 aa16.51■□□□□ 0.23
SFMBT1-201ENST00000394752 KDM3BQ7LBC6 1761 aa16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 CCNT1O60563 726 aaKnown RBP16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 RPS6KA4O75676 772 aa16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 TUBB4AP04350 444 aa16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 PARP1P09874 1014 aaKnown RBP16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 LIFRP42702 1097 aa16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 PTGDRQ13258 359 aa16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 WDHD1O75717 1129 aaPredicted RBP16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 CELF1Q92879 486 aaKnown RBP16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 PSMB7Q99436 277 aa16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 CALCOCO1Q9P1Z2 691 aa16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 MINPP1Q9UNW1 487 aa16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 RAD51AP2Q09MP3 1159 aa16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 SMIM5Q71RC9 77 aa16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 DYMQ7RTS9 669 aa16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 RASGRP4Q8TDF6 673 aa16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 CSRNP2Q9H175 543 aa16.5■□□□□ 0.23
SFMBT1-201ENST00000394752 ST3GAL1Q11201 340 aa16.49■□□□□ 0.23
SFMBT1-201ENST00000394752 CEP112Q8N8E3 955 aa16.49■□□□□ 0.23
SFMBT1-201ENST00000394752 NARFQ9UHQ1 456 aa16.49■□□□□ 0.23
SFMBT1-201ENST00000394752 POTEB2H3BUK9 544 aa16.49■□□□□ 0.23
SFMBT1-201ENST00000394752 NTSR2O95665 410 aa16.49■□□□□ 0.23
SFMBT1-201ENST00000394752 BCCIPQ9P287 314 aaKnown RBP eCLIP16.49■□□□□ 0.23
SFMBT1-201ENST00000394752 FMNL1O95466 1100 aaPredicted RBP16.49■□□□□ 0.23
SFMBT1-201ENST00000394752 SLC4A9Q96Q91 983 aa16.49■□□□□ 0.23
SFMBT1-201ENST00000394752 PCDHB6Q9Y5E3 794 aa16.49■□□□□ 0.23
SFMBT1-201ENST00000394752 ALX1Q15699 326 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 TMEM132AQ24JP5 1023 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 VPS36Q86VN1 386 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 CUL5Q93034 780 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 NOC4LQ9BVI4 516 aaKnown RBP16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 VPS18Q9P253 973 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 INF2Q27J81 1249 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 BARGINQ6ZT62 677 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 NELFBQ8WX92 580 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 SYMPKQ92797 1274 aaKnown RBP16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 FAM107BQ9H098 131 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 KIAA0754O94854 1291 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 ERLIN2O94905 339 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 KIF20AO95235 890 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 CHMP4BP1P59074 171 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 GDAP1L1Q96MZ0 367 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 MYO6Q9UM54 1294 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 FAM170AA1A519 330 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 GSG1L2A8MUP6 293 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 STAG1Q8WVM7 1258 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 FERMT2Q96AC1 680 aa16.48■□□□□ 0.23
SFMBT1-201ENST00000394752 SSR1P43307 286 aaKnown RBP16.47■□□□□ 0.23
SFMBT1-201ENST00000394752 DNAJC21Q5F1R6 531 aaKnown RBP16.47■□□□□ 0.23
SFMBT1-201ENST00000394752 SMAP1Q8IYB5 467 aaPredicted RBP16.47■□□□□ 0.23
SFMBT1-201ENST00000394752 EHBP1Q8NDI1 1231 aa16.47■□□□□ 0.23
SFMBT1-201ENST00000394752 PPP2R2CQ9Y2T4 447 aa16.47■□□□□ 0.23
SFMBT1-201ENST00000394752 MRC1P22897 1456 aa16.47■□□□□ 0.23
SFMBT1-201ENST00000394752 TRAF5O00463 557 aa16.47■□□□□ 0.23
SFMBT1-201ENST00000394752 IFNAR1P17181 557 aa16.47■□□□□ 0.23
SFMBT1-201ENST00000394752 CASP1P29466 404 aa16.47■□□□□ 0.23
SFMBT1-201ENST00000394752 KRT83P78385 493 aa16.47■□□□□ 0.23
SFMBT1-201ENST00000394752 LINC00116Q8NCU8 138 aa16.47■□□□□ 0.23
SFMBT1-201ENST00000394752 PNMA1Q8ND90 353 aa16.47■□□□□ 0.23
SFMBT1-201ENST00000394752 SAMM50Q9Y512 469 aa16.47■□□□□ 0.23
SFMBT1-201ENST00000394752 SAMSN1Q9NSI8 373 aaKnown RBP16.47■□□□□ 0.23
SFMBT1-201ENST00000394752 ABCC6O95255 1503 aa16.46■□□□□ 0.23
SFMBT1-201ENST00000394752 TACC1O75410 805 aa16.46■□□□□ 0.23
SFMBT1-201ENST00000394752 CTDNEP1O95476 244 aa16.46■□□□□ 0.23
SFMBT1-201ENST00000394752 LY9Q9HBG7 655 aa16.46■□□□□ 0.23
SFMBT1-201ENST00000394752 TNS2Q63HR2 1409 aa16.46■□□□□ 0.23
SFMBT1-201ENST00000394752 CAPN2P17655 700 aa16.46■□□□□ 0.23
SFMBT1-201ENST00000394752 ANTXR2P58335 489 aa16.46■□□□□ 0.23
SFMBT1-201ENST00000394752 RNASE9P60153 205 aaKnown RBP16.46■□□□□ 0.23
SFMBT1-201ENST00000394752 ATP8A2Q9NTI2 1148 aa16.46■□□□□ 0.23
SFMBT1-201ENST00000394752 PCP11498 1178 aaKnown RBP16.46■□□□□ 0.23
SFMBT1-201ENST00000394752 MECOMQ03112 1051 aa16.46■□□□□ 0.23
SFMBT1-201ENST00000394752 EPSTI1Q96J88 318 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms