RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 AATFQ9NY61 560 aaKnown RBP eCLIP18.89■□□□□ 0.62
SIPA1-201ENST00000394224 FAM53CQ9NYF3 392 aa18.89■□□□□ 0.62
SIPA1-201ENST00000394224 CPDO75976 1380 aa18.89■□□□□ 0.62
SIPA1-201ENST00000394224 B4DLN1 442 aa18.89■□□□□ 0.61
SIPA1-201ENST00000394224 USP17L12C9JPN9 530 aa18.89■□□□□ 0.61
SIPA1-201ENST00000394224 USP17L21D6R901 530 aa18.89■□□□□ 0.61
SIPA1-201ENST00000394224 TTF1Q15361 905 aaPredicted RBP18.89■□□□□ 0.61
SIPA1-201ENST00000394224 TTC38Q5R3I4 469 aa18.89■□□□□ 0.61
SIPA1-201ENST00000394224 WASF1Q92558 559 aa18.89■□□□□ 0.61
SIPA1-201ENST00000394224 LRRC37A3O60309 1634 aa18.89■□□□□ 0.61
SIPA1-201ENST00000394224 KCNJ18B7U540 433 aa18.89■□□□□ 0.61
SIPA1-201ENST00000394224 SLC5A1P13866 664 aa18.89■□□□□ 0.61
SIPA1-201ENST00000394224 XBP1P17861 261 aa18.89■□□□□ 0.61
SIPA1-201ENST00000394224 KCNJ12Q14500 433 aa18.89■□□□□ 0.61
SIPA1-201ENST00000394224 KCTD16Q68DU8 428 aa18.89■□□□□ 0.61
SIPA1-201ENST00000394224 NKRFO15226 690 aaKnown RBP eCLIP18.88■□□□□ 0.61
SIPA1-201ENST00000394224 IL2RBP14784 551 aa18.88■□□□□ 0.61
SIPA1-201ENST00000394224 TBX2Q13207 712 aaPredicted RBP18.88■□□□□ 0.61
SIPA1-201ENST00000394224 AGPAT5Q9NUQ2 364 aa18.88■□□□□ 0.61
SIPA1-201ENST00000394224 TTC26A0AVF1 554 aa18.88■□□□□ 0.61
SIPA1-201ENST00000394224 PMS1P54277 932 aaKnown RBP18.88■□□□□ 0.61
SIPA1-201ENST00000394224 EZH2Q15910 746 aaKnown RBP18.88■□□□□ 0.61
SIPA1-201ENST00000394224 BEND6Q5SZJ8 279 aaPredicted RBP18.88■□□□□ 0.61
SIPA1-201ENST00000394224 CTR9Q6PD62 1173 aa18.88■□□□□ 0.61
SIPA1-201ENST00000394224 ANKRD20A12PQ8NF67 263 aa18.88■□□□□ 0.61
SIPA1-201ENST00000394224 ADD3Q9UEY8 706 aaKnown RBP18.88■□□□□ 0.61
SIPA1-201ENST00000394224 MYO6Q9UM54 1294 aa18.88■□□□□ 0.61
SIPA1-201ENST00000394224 SRPRBQ9Y5M8 271 aaKnown RBP18.88■□□□□ 0.61
SIPA1-201ENST00000394224 STAT6P42226 847 aa18.88■□□□□ 0.61
SIPA1-201ENST00000394224 CATIPQ7Z7H3 387 aa18.88■□□□□ 0.61
SIPA1-201ENST00000394224 SLC51AQ86UW1 340 aa18.88■□□□□ 0.61
SIPA1-201ENST00000394224 GOLGA6L9A6NEM1 432 aa18.87■□□□□ 0.61
SIPA1-201ENST00000394224 PCCAP05165 728 aaPredicted RBP18.87■□□□□ 0.61
SIPA1-201ENST00000394224 ISCA1Q9BUE6 129 aa18.87■□□□□ 0.61
SIPA1-201ENST00000394224 KRT23Q9C075 422 aa18.87■□□□□ 0.61
SIPA1-201ENST00000394224 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.87■□□□□ 0.61
SIPA1-201ENST00000394224 SAMM50Q9Y512 469 aa18.87■□□□□ 0.61
SIPA1-201ENST00000394224 PUM3Q15397 648 aaKnown RBP18.87■□□□□ 0.61
SIPA1-201ENST00000394224 FAM207AQ9NSI2 230 aaPredicted RBP18.87■□□□□ 0.61
SIPA1-201ENST00000394224 STX8Q9UNK0 236 aa18.87■□□□□ 0.61
SIPA1-201ENST00000394224 A0A1B0GTH6 734 aa18.87■□□□□ 0.61
SIPA1-201ENST00000394224 CCDC151A5D8V7 595 aa18.87■□□□□ 0.61
SIPA1-201ENST00000394224 RNF40O75150 1001 aa18.87■□□□□ 0.61
SIPA1-201ENST00000394224 EIF3JO75822 258 aaKnown RBP18.87■□□□□ 0.61
SIPA1-201ENST00000394224 PRCPP42785 496 aa18.87■□□□□ 0.61
SIPA1-201ENST00000394224 CCDC96Q2M329 555 aa18.87■□□□□ 0.61
SIPA1-201ENST00000394224 ENAHQ8N8S7 591 aaPredicted RBP18.87■□□□□ 0.61
SIPA1-201ENST00000394224 CEP131Q9UPN4 1083 aa18.87■□□□□ 0.61
SIPA1-201ENST00000394224 PLEKP08567 350 aaPredicted RBP18.86■□□□□ 0.61
SIPA1-201ENST00000394224 ABHD10Q9NUJ1 306 aa18.86■□□□□ 0.61
SIPA1-201ENST00000394224 CWC15Q9P013 229 aaKnown RBP18.86■□□□□ 0.61
SIPA1-201ENST00000394224 TOPAZ1Q8N9V7 1692 aa18.86■□□□□ 0.61
SIPA1-201ENST00000394224 COPB1P53618 953 aaKnown RBP18.86■□□□□ 0.61
SIPA1-201ENST00000394224 CEP112Q8N8E3 955 aa18.86■□□□□ 0.61
SIPA1-201ENST00000394224 CCDC148Q8NFR7 591 aa18.86■□□□□ 0.61
SIPA1-201ENST00000394224 SMARCC1Q92922 1105 aaPredicted RBP18.86■□□□□ 0.61
SIPA1-201ENST00000394224 IPO7O95373 1038 aaKnown RBP18.86■□□□□ 0.61
SIPA1-201ENST00000394224 ACTN2P35609 894 aa18.86■□□□□ 0.61
SIPA1-201ENST00000394224 ATP1A2P50993 1020 aa18.86■□□□□ 0.61
SIPA1-201ENST00000394224 CRACR2AQ9BSW2 395 aa18.86■□□□□ 0.61
SIPA1-201ENST00000394224 BRMS1Q9HCU9 246 aa18.86■□□□□ 0.61
SIPA1-201ENST00000394224 EPN1Q9Y6I3 576 aaPredicted RBP18.86■□□□□ 0.61
SIPA1-201ENST00000394224 NFAT5O94916 1531 aa18.86■□□□□ 0.61
SIPA1-201ENST00000394224 TSPY2A6NKD2 308 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 ZEB2O60315 1214 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 PAK1Q13153 545 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 UBE3CQ15386 1083 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 HEATR3Q7Z4Q2 680 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 DNAAF5Q86Y56 855 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 ESR2Q92731 530 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 TANGO6Q9C0B7 1094 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 LUC7L2Q9Y383 392 aaKnown RBP18.85■□□□□ 0.61
SIPA1-201ENST00000394224 PPP1R3GB7ZBB8 358 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 SSBP05455 408 aaKnown RBP eCLIP18.85■□□□□ 0.61
SIPA1-201ENST00000394224 MYBL2P10244 700 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 MICALL1Q8N3F8 863 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 MAGEB6P1A0A0J9YX57 407 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 CCDC196A0A1B0GTZ2 297 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 IDEP14735 1019 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 LIG3P49916 1009 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 GIGYF2Q6Y7W6 1299 aaKnown RBP18.85■□□□□ 0.61
SIPA1-201ENST00000394224 CNGA4Q8IV77 575 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 GPATCH11Q8N954 259 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 LPIN2Q92539 896 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 LACRTQ9GZZ8 138 aa18.85■□□□□ 0.61
SIPA1-201ENST00000394224 MTIF2P46199 727 aaKnown RBP18.84■□□□□ 0.61
SIPA1-201ENST00000394224 HDAC7Q8WUI4 952 aa18.84■□□□□ 0.61
SIPA1-201ENST00000394224 DEF6Q9H4E7 631 aa18.84■□□□□ 0.61
SIPA1-201ENST00000394224 PCDH11XQ9BZA7 1347 aa18.84■□□□□ 0.61
SIPA1-201ENST00000394224 PCDH11YQ9BZA8 1340 aa18.84■□□□□ 0.61
SIPA1-201ENST00000394224 ESYT3A0FGR9 886 aa18.84■□□□□ 0.61
SIPA1-201ENST00000394224 INF2Q27J81 1249 aa18.84■□□□□ 0.61
SIPA1-201ENST00000394224 SUSD4Q5VX71 490 aa18.84■□□□□ 0.61
SIPA1-201ENST00000394224 TYW1BQ6NUM6 668 aa18.84■□□□□ 0.61
SIPA1-201ENST00000394224 IQCA1Q86XH1 822 aa18.84■□□□□ 0.61
SIPA1-201ENST00000394224 CTCFLQ8NI51 663 aaPredicted RBP18.84■□□□□ 0.61
SIPA1-201ENST00000394224 NIP7Q9Y221 180 aaKnown RBP eCLIP18.84■□□□□ 0.61
SIPA1-201ENST00000394224 SLIT1O75093 1534 aa18.84■□□□□ 0.61
SIPA1-201ENST00000394224 NCK2O43639 380 aa18.83■□□□□ 0.61
SIPA1-201ENST00000394224 BUB1O43683 1085 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 341.2 ms