RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.69■■□□□ 1.22
PSEN1-203ENST00000394157 IRF6O14896 467 aa22.68■■□□□ 1.22
PSEN1-203ENST00000394157 CPA1P15085 419 aa22.68■■□□□ 1.22
PSEN1-203ENST00000394157 NEK4P51957 841 aa22.68■■□□□ 1.22
PSEN1-203ENST00000394157 GTF2A2P52657 109 aa22.68■■□□□ 1.22
PSEN1-203ENST00000394157 ANKRD1Q15327 319 aa22.68■■□□□ 1.22
PSEN1-203ENST00000394157 DEFB115Q30KQ5 88 aa22.68■■□□□ 1.22
PSEN1-203ENST00000394157 SH3D19Q5HYK7 790 aa22.68■■□□□ 1.22
PSEN1-203ENST00000394157 CLEC10AQ8IUN9 316 aa22.68■■□□□ 1.22
PSEN1-203ENST00000394157 FEZ1Q99689 392 aa22.68■■□□□ 1.22
PSEN1-203ENST00000394157 TMEM47Q9BQJ4 181 aa22.68■■□□□ 1.22
PSEN1-203ENST00000394157 KAT14Q9H8E8 782 aa22.68■■□□□ 1.22
PSEN1-203ENST00000394157 LY9Q9HBG7 655 aa22.68■■□□□ 1.22
PSEN1-203ENST00000394157 GOPCQ9HD26 462 aa22.68■■□□□ 1.22
PSEN1-203ENST00000394157 A0A1W2PRG0 241 aa22.67■■□□□ 1.22
PSEN1-203ENST00000394157 TRIM75PA6NK02 468 aa22.67■■□□□ 1.22
PSEN1-203ENST00000394157 HSPA6P17066 643 aa22.67■■□□□ 1.22
PSEN1-203ENST00000394157 ECE1P42892 770 aa22.67■■□□□ 1.22
PSEN1-203ENST00000394157 SNAPC2Q13487 334 aa22.67■■□□□ 1.22
PSEN1-203ENST00000394157 COL9A3Q14050 684 aaPredicted RBP22.67■■□□□ 1.22
PSEN1-203ENST00000394157 USP17L2Q6R6M4 530 aa22.67■■□□□ 1.22
PSEN1-203ENST00000394157 Q6ZUG5 572 aa22.67■■□□□ 1.22
PSEN1-203ENST00000394157 CCDC84Q86UT8 332 aaPredicted RBP22.67■■□□□ 1.22
PSEN1-203ENST00000394157 GMCL1P1Q8NEA9 526 aa22.67■■□□□ 1.22
PSEN1-203ENST00000394157 ACER1Q8TDN7 264 aa22.67■■□□□ 1.22
PSEN1-203ENST00000394157 LPAR1Q92633 364 aa22.67■■□□□ 1.22
PSEN1-203ENST00000394157 MYH4Q9Y623 1939 aa22.67■■□□□ 1.22
PSEN1-203ENST00000394157 A0A0G2JLL6 359 aaPredicted RBP22.66■■□□□ 1.22
PSEN1-203ENST00000394157 GJA5P36382 358 aa22.66■■□□□ 1.22
PSEN1-203ENST00000394157 MTMR2Q13614 643 aa22.66■■□□□ 1.22
PSEN1-203ENST00000394157 PRRT2Q7Z6L0 340 aaPredicted RBP22.66■■□□□ 1.22
PSEN1-203ENST00000394157 PNMA1Q8ND90 353 aa22.66■■□□□ 1.22
PSEN1-203ENST00000394157 C12orf42Q96LP6 360 aa22.66■■□□□ 1.22
PSEN1-203ENST00000394157 VCPKMTQ9H867 229 aa22.66■■□□□ 1.22
PSEN1-203ENST00000394157 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.66■■□□□ 1.22
PSEN1-203ENST00000394157 CCDC69A6NI79 296 aa22.65■■□□□ 1.22
PSEN1-203ENST00000394157 CETPP11597 493 aa22.65■■□□□ 1.22
PSEN1-203ENST00000394157 NFXL1Q6ZNB6 911 aa22.65■■□□□ 1.22
PSEN1-203ENST00000394157 FASTKD5Q7L8L6 764 aaKnown RBP22.65■■□□□ 1.22
PSEN1-203ENST00000394157 PROCA1Q8NCQ7 364 aaPredicted RBP22.65■■□□□ 1.22
PSEN1-203ENST00000394157 TCEANC2Q96MN5 208 aa22.65■■□□□ 1.22
PSEN1-203ENST00000394157 LRRC2Q9BYS8 371 aa22.65■■□□□ 1.22
PSEN1-203ENST00000394157 TMOD4Q9NZQ9 345 aa22.65■■□□□ 1.22
PSEN1-203ENST00000394157 FAM155AB1AL88 458 aaPredicted RBP22.64■■□□□ 1.21
PSEN1-203ENST00000394157 ST18O60284 1047 aa22.64■■□□□ 1.21
PSEN1-203ENST00000394157 RCAN1P53805 252 aa22.64■■□□□ 1.21
PSEN1-203ENST00000394157 EVCP57679 992 aa22.64■■□□□ 1.21
PSEN1-203ENST00000394157 INHBEP58166 350 aa22.64■■□□□ 1.21
PSEN1-203ENST00000394157 SYNE3Q6ZMZ3 975 aa22.64■■□□□ 1.21
PSEN1-203ENST00000394157 CATIPQ7Z7H3 387 aa22.64■■□□□ 1.21
PSEN1-203ENST00000394157 MANSC4A6NHS7 340 aaPredicted RBP22.63■■□□□ 1.21
PSEN1-203ENST00000394157 F5H6K3 240 aa22.63■■□□□ 1.21
PSEN1-203ENST00000394157 DDAH1O94760 285 aa22.63■■□□□ 1.21
PSEN1-203ENST00000394157 CALM1P0DP23 149 aa22.63■■□□□ 1.21
PSEN1-203ENST00000394157 CALM2P0DP24 149 aa22.63■■□□□ 1.21
PSEN1-203ENST00000394157 CALM3P0DP25 149 aa22.63■■□□□ 1.21
PSEN1-203ENST00000394157 KLRC3Q07444 240 aa22.63■■□□□ 1.21
PSEN1-203ENST00000394157 NOGQ13253 232 aa22.63■■□□□ 1.21
PSEN1-203ENST00000394157 REM2Q8IYK8 340 aaPredicted RBP22.63■■□□□ 1.21
PSEN1-203ENST00000394157 LRRC47Q8N1G4 583 aaKnown RBP22.63■■□□□ 1.21
PSEN1-203ENST00000394157 BRF1Q92994 677 aa22.63■■□□□ 1.21
PSEN1-203ENST00000394157 GMCL1Q96IK5 515 aa22.63■■□□□ 1.21
PSEN1-203ENST00000394157 MAP3K14Q99558 947 aa22.63■■□□□ 1.21
PSEN1-203ENST00000394157 SLC12A7Q9Y666 1083 aa22.63■■□□□ 1.21
PSEN1-203ENST00000394157 HMGCS2P54868 508 aa22.62■■□□□ 1.21
PSEN1-203ENST00000394157 TOB2Q14106 344 aaPredicted RBP22.62■■□□□ 1.21
PSEN1-203ENST00000394157 SLFN13Q68D06 897 aa22.62■■□□□ 1.21
PSEN1-203ENST00000394157 PAXIP1Q6ZW49 1069 aaPredicted RBP22.62■■□□□ 1.21
PSEN1-203ENST00000394157 ZNF654Q8IZM8 581 aa22.62■■□□□ 1.21
PSEN1-203ENST00000394157 DCAF4Q8WV16 495 aa22.62■■□□□ 1.21
PSEN1-203ENST00000394157 MS4A4AQ96JQ5 239 aa22.62■■□□□ 1.21
PSEN1-203ENST00000394157 CAPNS2Q96L46 248 aa22.62■■□□□ 1.21
PSEN1-203ENST00000394157 GPHNQ9NQX3 736 aaPredicted RBP22.62■■□□□ 1.21
PSEN1-203ENST00000394157 EMILIN3Q9NT22 766 aa22.62■■□□□ 1.21
PSEN1-203ENST00000394157 PTPRFP10586 1907 aa22.62■■□□□ 1.21
PSEN1-203ENST00000394157 TESPA1A2RU30 521 aaPredicted RBP22.61■■□□□ 1.21
PSEN1-203ENST00000394157 WDR46O15213 610 aaKnown RBP22.61■■□□□ 1.21
PSEN1-203ENST00000394157 NDUFB10O96000 172 aa22.61■■□□□ 1.21
PSEN1-203ENST00000394157 SNHG28P0DPA3 235 aa22.61■■□□□ 1.21
PSEN1-203ENST00000394157 SENP2Q9HC62 589 aa22.61■■□□□ 1.21
PSEN1-203ENST00000394157 LOC285556D6RIA3 1793 aa22.61■■□□□ 1.21
PSEN1-203ENST00000394157 ABCB7O75027 752 aa22.6■■□□□ 1.21
PSEN1-203ENST00000394157 MCM2P49736 904 aa22.6■■□□□ 1.21
PSEN1-203ENST00000394157 AK2P54819 239 aa22.6■■□□□ 1.21
PSEN1-203ENST00000394157 SREBF2Q12772 1141 aa22.6■■□□□ 1.21
PSEN1-203ENST00000394157 TROAPQ12815 778 aa22.6■■□□□ 1.21
PSEN1-203ENST00000394157 PABPC4Q13310 644 aaKnown RBP eCLIP22.6■■□□□ 1.21
PSEN1-203ENST00000394157 PPP2R5BQ15173 497 aa22.6■■□□□ 1.21
PSEN1-203ENST00000394157 ZYXQ15942 572 aaKnown RBP22.6■■□□□ 1.21
PSEN1-203ENST00000394157 CYP4F22Q6NT55 531 aa22.6■■□□□ 1.21
PSEN1-203ENST00000394157 APOA5Q6Q788 366 aa22.6■■□□□ 1.21
PSEN1-203ENST00000394157 ZNF274Q96GC6 653 aaPredicted RBP22.6■■□□□ 1.21
PSEN1-203ENST00000394157 CCL15-CCL14A0A0B4J2E2 113 aa22.59■■□□□ 1.21
PSEN1-203ENST00000394157 KLF18A0A0U1RQI7 1052 aa22.59■■□□□ 1.21
PSEN1-203ENST00000394157 PDHBP11177 359 aa22.59■■□□□ 1.21
PSEN1-203ENST00000394157 SLC1A4P43007 532 aa22.59■■□□□ 1.21
PSEN1-203ENST00000394157 CCL15Q16663 113 aa22.59■■□□□ 1.21
PSEN1-203ENST00000394157 GPATCH4Q5T3I0 446 aaKnown RBP22.59■■□□□ 1.21
PSEN1-203ENST00000394157 ZCCHC17Q9NP64 241 aaKnown RBP22.59■■□□□ 1.21
PSEN1-203ENST00000394157 SLC45A1Q9Y2W3 748 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms