RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 HELLSQ9NRZ9 838 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 DIAPH3Q9NSV4 1193 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 DOCK1Q14185 1865 aa11.04□□□□□ -0.64
HMGN1-202ENST00000380747 MYH1P12882 1939 aa11.03□□□□□ -0.64
HMGN1-202ENST00000380747 A0A0D9SFI3 127 aa11.03□□□□□ -0.64
HMGN1-202ENST00000380747 PATL2C9JE40 543 aaKnown RBP11.03□□□□□ -0.64
HMGN1-202ENST00000380747 SMIM22K7EJ46 135 aa11.03□□□□□ -0.64
HMGN1-202ENST00000380747 MPHOSPH10O00566 681 aaKnown RBP11.03□□□□□ -0.64
HMGN1-202ENST00000380747 SPP2Q13103 211 aa11.03□□□□□ -0.64
HMGN1-202ENST00000380747 RAB3GAP1Q15042 981 aa11.03□□□□□ -0.64
HMGN1-202ENST00000380747 SLC9C1Q4G0N8 1177 aa11.03□□□□□ -0.64
HMGN1-202ENST00000380747 MCMDC2Q4G0Z9 681 aa11.03□□□□□ -0.64
HMGN1-202ENST00000380747 TTC22Q5TAA0 569 aa11.03□□□□□ -0.64
HMGN1-202ENST00000380747 GIMAP6Q6P9H5 292 aa11.03□□□□□ -0.64
HMGN1-202ENST00000380747 FASTKD5Q7L8L6 764 aaKnown RBP11.03□□□□□ -0.64
HMGN1-202ENST00000380747 IFNL3Q8IZI9 196 aa11.03□□□□□ -0.64
HMGN1-202ENST00000380747 ZNF280CQ8ND82 737 aa11.03□□□□□ -0.64
HMGN1-202ENST00000380747 TBC1D2Q9BYX2 928 aa11.03□□□□□ -0.64
HMGN1-202ENST00000380747 NAPBQ9H115 298 aa11.03□□□□□ -0.64
HMGN1-202ENST00000380747 EPB41L4AQ9HCS5 686 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-202ENST00000380747 CABP5Q9NP86 173 aa11.03□□□□□ -0.64
HMGN1-202ENST00000380747 GINM1Q9NU53 330 aa11.03□□□□□ -0.64
HMGN1-202ENST00000380747 SWAP70Q9UH65 585 aa11.03□□□□□ -0.64
HMGN1-202ENST00000380747 DDX60LQ5H9U9 1706 aaKnown RBP11.03□□□□□ -0.64
HMGN1-202ENST00000380747 A0A0G2JLL6 359 aaPredicted RBP11.02□□□□□ -0.65
HMGN1-202ENST00000380747 PDHXO00330 501 aa11.02□□□□□ -0.65
HMGN1-202ENST00000380747 GSPT1P15170 499 aaKnown RBP11.02□□□□□ -0.65
HMGN1-202ENST00000380747 CDK8P49336 464 aa11.02□□□□□ -0.65
HMGN1-202ENST00000380747 SBK1Q52WX2 424 aa11.02□□□□□ -0.65
HMGN1-202ENST00000380747 PRRT2Q7Z6L0 340 aaPredicted RBP11.02□□□□□ -0.65
HMGN1-202ENST00000380747 ANKRD23Q86SG2 305 aa11.02□□□□□ -0.65
HMGN1-202ENST00000380747 TICAM2Q86XR7 235 aa11.02□□□□□ -0.65
HMGN1-202ENST00000380747 ZFYVE28Q9HCC9 887 aa11.02□□□□□ -0.65
HMGN1-202ENST00000380747 ZCCHC17Q9NP64 241 aaKnown RBP11.02□□□□□ -0.65
HMGN1-202ENST00000380747 PTCH2Q9Y6C5 1203 aa11.02□□□□□ -0.65
HMGN1-202ENST00000380747 HIP1O00291 1037 aa11.01□□□□□ -0.65
HMGN1-202ENST00000380747 GNRH1P01148 92 aa11.01□□□□□ -0.65
HMGN1-202ENST00000380747 HMGCS2P54868 508 aa11.01□□□□□ -0.65
HMGN1-202ENST00000380747 PRMT2P55345 433 aa11.01□□□□□ -0.65
HMGN1-202ENST00000380747 MTMR2Q13614 643 aa11.01□□□□□ -0.65
HMGN1-202ENST00000380747 MOGSQ13724 837 aa11.01□□□□□ -0.65
HMGN1-202ENST00000380747 VPS53Q5VIR6 699 aa11.01□□□□□ -0.65
HMGN1-202ENST00000380747 GPAT2Q6NUI2 795 aa11.01□□□□□ -0.65
HMGN1-202ENST00000380747 CWC27Q6UX04 472 aaKnown RBP11.01□□□□□ -0.65
HMGN1-202ENST00000380747 C16orf86Q6ZW13 317 aa11.01□□□□□ -0.65
HMGN1-202ENST00000380747 FEZ1Q99689 392 aa11.01□□□□□ -0.65
HMGN1-202ENST00000380747 WDR18Q9BV38 432 aa11.01□□□□□ -0.65
HMGN1-202ENST00000380747 MKNK2Q9HBH9 465 aa11.01□□□□□ -0.65
HMGN1-202ENST00000380747 TMOD4Q9NZQ9 345 aa11.01□□□□□ -0.65
HMGN1-202ENST00000380747 USP17L10C9JJH3 530 aa11□□□□□ -0.65
HMGN1-202ENST00000380747 H0YGN5 161 aa11□□□□□ -0.65
HMGN1-202ENST00000380747 AKR1B1P15121 316 aa11□□□□□ -0.65
HMGN1-202ENST00000380747 MFAP1P55081 439 aaKnown RBP11□□□□□ -0.65
HMGN1-202ENST00000380747 BACE1P56817 501 aa11□□□□□ -0.65
HMGN1-202ENST00000380747 SEPT2Q15019 361 aa11□□□□□ -0.65
HMGN1-202ENST00000380747 ZYXQ15942 572 aaKnown RBP11□□□□□ -0.65
HMGN1-202ENST00000380747 ZNF589Q86UQ0 364 aaPredicted RBP11□□□□□ -0.65
HMGN1-202ENST00000380747 SKAP1Q86WV1 359 aa11□□□□□ -0.65
HMGN1-202ENST00000380747 OXER1Q8TDS5 423 aa11□□□□□ -0.65
HMGN1-202ENST00000380747 CCDC17Q96LX7 622 aa11□□□□□ -0.65
HMGN1-202ENST00000380747 CCDC171Q6TFL3 1326 aa11□□□□□ -0.65
HMGN1-202ENST00000380747 C19orf81C9J6K1 198 aa10.99□□□□□ -0.65
HMGN1-202ENST00000380747 FOXP2O15409 715 aa10.99□□□□□ -0.65
HMGN1-202ENST00000380747 TLR2O60603 784 aa10.99□□□□□ -0.65
HMGN1-202ENST00000380747 PRDM1O75626 825 aa10.99□□□□□ -0.65
HMGN1-202ENST00000380747 SLC3A2P08195 630 aaKnown RBP10.99□□□□□ -0.65
HMGN1-202ENST00000380747 CYP2C8P10632 490 aa10.99□□□□□ -0.65
HMGN1-202ENST00000380747 GUCY1A2P33402 732 aa10.99□□□□□ -0.65
HMGN1-202ENST00000380747 PPARAQ07869 468 aa10.99□□□□□ -0.65
HMGN1-202ENST00000380747 TREML2Q5T2D2 321 aa10.99□□□□□ -0.65
HMGN1-202ENST00000380747 TMEM179Q6ZVK1 233 aa10.99□□□□□ -0.65
HMGN1-202ENST00000380747 PROCA1Q8NCQ7 364 aaPredicted RBP10.99□□□□□ -0.65
HMGN1-202ENST00000380747 PARK7Q99497 189 aaKnown RBP10.99□□□□□ -0.65
HMGN1-202ENST00000380747 CPA4Q9UI42 421 aa10.99□□□□□ -0.65
HMGN1-202ENST00000380747 AGTPBP1Q9UPW5 1226 aa10.99□□□□□ -0.65
HMGN1-202ENST00000380747 ATAD5Q96QE3 1844 aa10.99□□□□□ -0.65
HMGN1-202ENST00000380747 ROBO3Q96MS0 1386 aa10.99□□□□□ -0.65
HMGN1-202ENST00000380747 BAZ2AQ9UIF9 1905 aaKnown RBP10.99□□□□□ -0.65
HMGN1-202ENST00000380747 HSPD1P10809 573 aaKnown RBP10.98□□□□□ -0.65
HMGN1-202ENST00000380747 OSBPP22059 807 aa10.98□□□□□ -0.65
HMGN1-202ENST00000380747 LACTBP83111 547 aaPredicted RBP10.98□□□□□ -0.65
HMGN1-202ENST00000380747 ATP2B2Q01814 1243 aa10.98□□□□□ -0.65
HMGN1-202ENST00000380747 PABPC4Q13310 644 aaKnown RBP eCLIP10.98□□□□□ -0.658e-10■■□□□ 13.3
HMGN1-202ENST00000380747 SH3D19Q5HYK7 790 aa10.98□□□□□ -0.65
HMGN1-202ENST00000380747 USP17L2Q6R6M4 530 aa10.98□□□□□ -0.65
HMGN1-202ENST00000380747 CLEC10AQ8IUN9 316 aa10.98□□□□□ -0.65
HMGN1-202ENST00000380747 ZNF444Q8N0Y2 327 aaPredicted RBP10.98□□□□□ -0.65
HMGN1-202ENST00000380747 ACER1Q8TDN7 264 aa10.98□□□□□ -0.65
HMGN1-202ENST00000380747 ZNF287Q9HBT7 754 aa10.98□□□□□ -0.65
HMGN1-202ENST00000380747 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.98□□□□□ -0.65
HMGN1-202ENST00000380747 SLC45A1Q9Y2W3 748 aa10.98□□□□□ -0.65
HMGN1-202ENST00000380747 PHIPQ8WWQ0 1821 aa10.98□□□□□ -0.65
HMGN1-202ENST00000380747 FGAP02671 866 aa10.97□□□□□ -0.65
HMGN1-202ENST00000380747 RASA1P20936 1047 aa10.97□□□□□ -0.65
HMGN1-202ENST00000380747 USP14P54578 494 aa10.97□□□□□ -0.65
HMGN1-202ENST00000380747 ICA1Q05084 483 aa10.97□□□□□ -0.65
HMGN1-202ENST00000380747 CTDSPL2Q05D32 466 aa10.97□□□□□ -0.65
HMGN1-202ENST00000380747 PDE4BQ07343 736 aa10.97□□□□□ -0.65
HMGN1-202ENST00000380747 KIF22Q14807 665 aa10.97□□□□□ -0.65
HMGN1-202ENST00000380747 ALX1Q15699 326 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms