RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 DOCK2Q92608 1830 aa18.82■□□□□ 0.6
PCDHA1-201ENST00000378133 TNKSO95271 1327 aa18.82■□□□□ 0.6
PCDHA1-201ENST00000378133 POTEB2H3BUK9 544 aa18.82■□□□□ 0.6
PCDHA1-201ENST00000378133 EIF5P55010 431 aaKnown RBP18.82■□□□□ 0.6
PCDHA1-201ENST00000378133 EPSTI1Q96J88 318 aa18.82■□□□□ 0.6
PCDHA1-201ENST00000378133 CDC23Q9UJX2 597 aa18.82■□□□□ 0.6
PCDHA1-201ENST00000378133 SOWAHDA6NJG2 315 aa18.81■□□□□ 0.6
PCDHA1-201ENST00000378133 AFMP43652 599 aa18.81■□□□□ 0.6
PCDHA1-201ENST00000378133 AKAP17AQ02040 695 aaKnown RBP18.81■□□□□ 0.6
PCDHA1-201ENST00000378133 EARS2Q5JPH6 523 aaKnown RBP18.81■□□□□ 0.6
PCDHA1-201ENST00000378133 KANK3Q6NY19 840 aa18.81■□□□□ 0.6
PCDHA1-201ENST00000378133 PNKPQ96T60 521 aa18.81■□□□□ 0.6
PCDHA1-201ENST00000378133 RAI14Q9P0K7 980 aa18.81■□□□□ 0.6
PCDHA1-201ENST00000378133 N4BP1O75113 896 aaKnown RBP18.81■□□□□ 0.6
PCDHA1-201ENST00000378133 PRDM1O75626 825 aa18.81■□□□□ 0.6
PCDHA1-201ENST00000378133 USP5P45974 858 aa18.81■□□□□ 0.6
PCDHA1-201ENST00000378133 NOP2P46087 812 aaKnown RBP18.81■□□□□ 0.6
PCDHA1-201ENST00000378133 CHRNDQ07001 517 aa18.81■□□□□ 0.6
PCDHA1-201ENST00000378133 SEC23AQ15436 765 aa18.81■□□□□ 0.6
PCDHA1-201ENST00000378133 CCDC152Q4G0S7 254 aa18.81■□□□□ 0.6
PCDHA1-201ENST00000378133 TRIML1Q8N9V2 468 aa18.81■□□□□ 0.6
PCDHA1-201ENST00000378133 RAB21Q9UL25 225 aa18.81■□□□□ 0.6
PCDHA1-201ENST00000378133 L1RE1Q9UN81 338 aa18.81■□□□□ 0.6
PCDHA1-201ENST00000378133 A0A087X0B3 334 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 AKR1B15C9JRZ8 316 aaPredicted RBP18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 KIF5CO60282 957 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 CASP1P29466 404 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 ESR2Q92731 530 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 MTA3Q9BTC8 594 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 ABCB6Q9NP58 842 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 TIAM2Q8IVF5 1701 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 LRP5O75197 1615 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 NR1I3Q14994 352 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 NOM1Q5C9Z4 860 aaKnown RBP18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 KLHL10Q6JEL2 608 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 INTS5Q6P9B9 1019 aaKnown RBP18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 GOLGA6L1Q8N7Z2 621 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 SPATA20Q8TB22 786 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 RNF26Q9BY78 433 aaPredicted RBP18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 SUGCTQ9HAC7 445 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 FAN1Q9Y2M0 1017 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 ARAP2Q8WZ64 1704 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 SPATA31A1Q5TZJ5 1347 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 WTIPA6NIX2 430 aaPredicted RBP18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 TRIM75PA6NK02 468 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 PLCD1P51178 756 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 PKN1Q16512 942 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 MSANTD4Q8NCY6 345 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 ADGRG1Q9Y653 693 aa18.8■□□□□ 0.6
PCDHA1-201ENST00000378133 CYP2D7A0A087X1C5 515 aa18.79■□□□□ 0.6
PCDHA1-201ENST00000378133 STX17P56962 302 aa18.79■□□□□ 0.6
PCDHA1-201ENST00000378133 KIF4BQ2VIQ3 1234 aa18.79■□□□□ 0.6
PCDHA1-201ENST00000378133 WWC2Q6AWC2 1192 aa18.79■□□□□ 0.6
PCDHA1-201ENST00000378133 PANX2Q96RD6 677 aa18.79■□□□□ 0.6
PCDHA1-201ENST00000378133 V9GY48 417 aaPredicted RBP18.79■□□□□ 0.6
PCDHA1-201ENST00000378133 MAGEB6P1A0A0J9YX57 407 aa18.79■□□□□ 0.6
PCDHA1-201ENST00000378133 TEX33O43247 280 aa18.79■□□□□ 0.6
PCDHA1-201ENST00000378133 RCAN1P53805 252 aa18.79■□□□□ 0.6
PCDHA1-201ENST00000378133 ZNF569Q5MCW4 686 aa18.79■□□□□ 0.6
PCDHA1-201ENST00000378133 ENAHQ8N8S7 591 aaPredicted RBP18.79■□□□□ 0.6
PCDHA1-201ENST00000378133 WNT7AO00755 349 aa18.78■□□□□ 0.6
PCDHA1-201ENST00000378133 XBP1P17861 261 aa18.78■□□□□ 0.6
PCDHA1-201ENST00000378133 GYG1P46976 350 aa18.78■□□□□ 0.6
PCDHA1-201ENST00000378133 MMP14P50281 582 aa18.78■□□□□ 0.6
PCDHA1-201ENST00000378133 MSL3Q8N5Y2 521 aaKnown RBP18.78■□□□□ 0.6
PCDHA1-201ENST00000378133 NIP7Q9Y221 180 aaKnown RBP eCLIP18.78■□□□□ 0.6
PCDHA1-201ENST00000378133 MYH6P13533 1939 aa18.78■□□□□ 0.6
PCDHA1-201ENST00000378133 A0A0U1RQJ8 604 aa18.78■□□□□ 0.6
PCDHA1-201ENST00000378133 RHOXF2BP0C7M4 288 aa18.78■□□□□ 0.6
PCDHA1-201ENST00000378133 ERCC5P28715 1186 aaPredicted RBP18.78■□□□□ 0.6
PCDHA1-201ENST00000378133 TUBB4BP68371 445 aa18.78■□□□□ 0.6
PCDHA1-201ENST00000378133 FOXR1Q6PIV2 292 aa18.78■□□□□ 0.6
PCDHA1-201ENST00000378133 RAD9BQ6WBX8 426 aa18.78■□□□□ 0.6
PCDHA1-201ENST00000378133 CPLX3Q8WVH0 158 aa18.78■□□□□ 0.6
PCDHA1-201ENST00000378133 ATRIPQ8WXE1 791 aa18.78■□□□□ 0.6
PCDHA1-201ENST00000378133 RHOXF2Q9BQY4 288 aa18.78■□□□□ 0.6
PCDHA1-201ENST00000378133 AATFQ9NY61 560 aaKnown RBP eCLIP18.78■□□□□ 0.6
PCDHA1-201ENST00000378133 PLEKHA8P1O95397 391 aa18.77■□□□□ 0.6
PCDHA1-201ENST00000378133 CD44P16070 742 aaKnown RBP18.77■□□□□ 0.6
PCDHA1-201ENST00000378133 KRT2P35908 639 aa18.77■□□□□ 0.6
PCDHA1-201ENST00000378133 CRKLP46109 303 aaKnown RBP18.77■□□□□ 0.6
PCDHA1-201ENST00000378133 HSP90B2PQ58FF3 399 aa18.77■□□□□ 0.6
PCDHA1-201ENST00000378133 CTR9Q6PD62 1173 aa18.77■□□□□ 0.6
PCDHA1-201ENST00000378133 CCDC102AQ96A19 550 aa18.77■□□□□ 0.6
PCDHA1-201ENST00000378133 ZSCAN10Q96SZ4 725 aaPredicted RBP18.77■□□□□ 0.6
PCDHA1-201ENST00000378133 PHF20Q9BVI0 1012 aa18.77■□□□□ 0.6
PCDHA1-201ENST00000378133 CCDC87Q9NVE4 849 aa18.77■□□□□ 0.6
PCDHA1-201ENST00000378133 MYH2Q9UKX2 1941 aa18.77■□□□□ 0.6
PCDHA1-201ENST00000378133 BCORQ6W2J9 1755 aa18.77■□□□□ 0.6
PCDHA1-201ENST00000378133 A0A1B0GTH6 734 aa18.77■□□□□ 0.59
PCDHA1-201ENST00000378133 RPS6KA5O75582 802 aa18.77■□□□□ 0.59
PCDHA1-201ENST00000378133 PSEN1P49768 467 aa18.77■□□□□ 0.59
PCDHA1-201ENST00000378133 DYNLL1P63167 89 aaKnown RBP18.77■□□□□ 0.59
PCDHA1-201ENST00000378133 TUBB2AQ13885 445 aa18.77■□□□□ 0.59
PCDHA1-201ENST00000378133 PPFIBP1Q86W92 1011 aa18.77■□□□□ 0.59
PCDHA1-201ENST00000378133 SMYD4Q8IYR2 804 aaPredicted RBP18.77■□□□□ 0.59
PCDHA1-201ENST00000378133 SYMPKQ92797 1274 aaKnown RBP18.77■□□□□ 0.59
PCDHA1-201ENST00000378133 PAGE5Q96GU1 130 aa18.77■□□□□ 0.59
PCDHA1-201ENST00000378133 TUBB2BQ9BVA1 445 aa18.77■□□□□ 0.59
PCDHA1-201ENST00000378133 BAZ2BQ9UIF8 2168 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms