RNA–Protein interactions for RNA: ENST00000374767.4

NIPSNAP3A-201, Transcript of nipsnap homolog 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3A, Length 1,633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-201ENST00000374767 PDLIM2Q96JY6 352 aa16.04■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 GMLQ99445 158 aa16.04■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 BRMS1Q9HCU9 246 aa16.04■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 VPS54Q9P1Q0 977 aa16.04■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 CUTAO60888 179 aa16.03■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 ENTPD3O75355 529 aa16.03■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 CALML3P27482 149 aa16.03■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 NR5A1Q13285 461 aa16.03■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 TPRNQ4KMQ1 711 aa16.03■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 GALNT17Q6IS24 598 aa16.03■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 STAG2Q8N3U4 1231 aa16.03■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 OXER1Q8TDS5 423 aa16.03■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 TIGD1Q96MW7 591 aa16.03■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 MTFR1LQ9H019 292 aa16.03■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 PI4KBQ9UBF8 816 aa16.03■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 FAM198AQ9UFP1 575 aa16.03■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 CEP131Q9UPN4 1083 aa16.03■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 ZNF646O15015 1829 aaPredicted RBP16.02■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 KINO60870 393 aaKnown RBP16.02■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 SNHG28P0DPA3 235 aa16.02■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 TRAPPC10P48553 1259 aa16.02■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 CAMK4Q16566 473 aa16.02■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 RSBN1LQ6PCB5 846 aaPredicted RBP16.02■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 FOXP4Q8IVH2 680 aaPredicted RBP16.02■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 ZNF579Q8NAF0 562 aaKnown RBP16.02■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 PIM2Q9P1W9 311 aa16.02■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 HPSEQ9Y251 543 aa16.02■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 SCN9AQ15858 1988 aa16.02■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 COL2A1P02458 1487 aaPredicted RBP16.02■□□□□ 0.16
NIPSNAP3A-201ENST00000374767 KIF13BQ9NQT8 1826 aa16.02■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 BMP15O95972 392 aa16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 PARP1P09874 1014 aaKnown RBP16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 PTPREP23469 700 aa16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 TYRO3Q06418 890 aa16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 ELOA2Q8IYF1 753 aaPredicted RBP16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 ATRNL1Q5VV63 1379 aa16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 MYH1P12882 1939 aa16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 CYTH3O43739 400 aa16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 TTLL1O95922 423 aa16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 AKR1B1P15121 316 aa16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 POLD1P28340 1107 aa16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 MMP14P50281 582 aa16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 NDUFA8P51970 172 aa16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 SLC35G1Q2M3R5 365 aa16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 ECM29Q5VYK3 1845 aa16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 RESP18Q5W5W9 173 aa16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 TATDN1Q6P1N9 297 aa16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 KRI1Q8N9T8 703 aaKnown RBP16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 DAGLBQ8NCG7 672 aa16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 CABP5Q9NP86 173 aa16.01■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 A0A1B0GVL5 298 aa16■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 hCG_1642624A0A1W2PR95 340 aa16■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 KLRF2D3W0D1 207 aa16■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 CFAP100Q494V2 611 aa16■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 ZFPM1Q8IX07 1006 aa16■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 LARGE2Q8N3Y3 721 aa16■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 MTMR14Q8NCE2 650 aa16■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 MKL1Q969V6 931 aa16■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 RIOX1Q9H6W3 641 aa16■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 SRPRBQ9Y5M8 271 aaKnown RBP16■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 MRVI1Q9Y6F6 885 aa16■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 PDHBP11177 359 aa15.99■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 VEGFAP15692 232 aaPredicted RBP15.99■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 MARCKSP29966 332 aaPredicted RBP15.99■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 RBM5P52756 815 aaKnown RBP eCLIP15.99■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 ASPRV1Q53RT3 343 aa15.99■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 SHC4Q6S5L8 630 aa15.99■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 SASS6Q6UVJ0 657 aa15.99■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 RNF214Q8ND24 703 aa15.99■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 AGBL3Q8NEM8 1001 aa15.99■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 FAM200AQ8TCP9 573 aa15.99■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 BARHL2Q9NY43 387 aa15.99■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 ZNRF3Q9ULT6 936 aa15.99■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 PCDHAC2Q9Y5I4 1007 aa15.99■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 TRIM75PA6NK02 468 aa15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 hCG_1984214I3L0E3 225 aa15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 M0R2N6 131 aa15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 ZNF202O95125 648 aa15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 PFKFB1P16118 471 aa15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 NLRP5P59047 1200 aa15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 FKBP1CQ5VVH2 108 aa15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 SH3BP5LQ7L8J4 393 aa15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 CKAP2LQ8IYA6 745 aa15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 ZNF713Q8N859 430 aaPredicted RBP15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 CCDC148Q8NFR7 591 aa15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 PRMT6Q96LA8 375 aaPredicted RBP15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 DNAJC18Q9H819 358 aa15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 FBXO2Q9UK22 296 aaPredicted RBP15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 HDAC9Q9UKV0 1011 aa15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 NOL7Q9UMY1 257 aaKnown RBP15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 PCDHA4Q9UN74 947 aa15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 PCDHB6Q9Y5E3 794 aa15.98■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 DDTLA6NHG4 134 aaPredicted RBP15.97■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 SPDYE2BA6NHP3 402 aa15.97■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 PSMD14O00487 310 aa15.97■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 SPDYE6P0CI01 402 aa15.97■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 HS1BP3Q53T59 392 aa15.97■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 DALRD3Q5D0E6 543 aaKnown RBP15.97■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 ZNF277Q9NRM2 450 aaPredicted RBP15.97■□□□□ 0.15
NIPSNAP3A-201ENST00000374767 CD2APQ9Y5K6 639 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms