RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 CAPN6Q9Y6Q1 641 aa6.78□□□□□ -1.32
USP48-202ENST00000374730 ADGBQ8N7X0 1667 aa6.77□□□□□ -1.32
USP48-202ENST00000374730 FAM221AA4D161 298 aa6.77□□□□□ -1.33
USP48-202ENST00000374730 PRR33A8MZF0 331 aa6.77□□□□□ -1.33
USP48-202ENST00000374730 ETV3P41162 512 aa6.77□□□□□ -1.33
USP48-202ENST00000374730 ZP2Q05996 745 aa6.77□□□□□ -1.33
USP48-202ENST00000374730 BNC2Q6ZN30 1099 aaPredicted RBP6.77□□□□□ -1.33
USP48-202ENST00000374730 THAP5Q7Z6K1 395 aa6.77□□□□□ -1.33
USP48-202ENST00000374730 RELL1Q8IUW5 271 aa6.77□□□□□ -1.33
USP48-202ENST00000374730 RIN3Q8TB24 985 aa6.77□□□□□ -1.33
USP48-202ENST00000374730 ACSF2Q96CM8 615 aaPredicted RBP6.77□□□□□ -1.33
USP48-202ENST00000374730 SEMA3GQ9NS98 782 aa6.77□□□□□ -1.33
USP48-202ENST00000374730 CCDC9Q9Y3X0 531 aaKnown RBP6.77□□□□□ -1.33
USP48-202ENST00000374730 ST14Q9Y5Y6 855 aa6.77□□□□□ -1.33
USP48-202ENST00000374730 CROCC2H7BZ55 1655 aa6.77□□□□□ -1.33
USP48-202ENST00000374730 CNTNAP4Q9C0A0 1308 aa6.76□□□□□ -1.33
USP48-202ENST00000374730 ZBTB7CA1YPR0 619 aa6.76□□□□□ -1.33
USP48-202ENST00000374730 PF4P02776 101 aa6.76□□□□□ -1.33
USP48-202ENST00000374730 TMEM201Q5SNT2 666 aa6.76□□□□□ -1.33
USP48-202ENST00000374730 FLAD1Q8NFF5 587 aa6.76□□□□□ -1.33
USP48-202ENST00000374730 XAGE3Q8WTP9 111 aa6.76□□□□□ -1.33
USP48-202ENST00000374730 DPH2Q9BQC3 489 aaPredicted RBP6.76□□□□□ -1.33
USP48-202ENST00000374730 PRR36Q9H6K5 1346 aa6.76□□□□□ -1.33
USP48-202ENST00000374730 ABCA8O94911 1581 aa6.75□□□□□ -1.33
USP48-202ENST00000374730 ROCK1Q13464 1354 aa6.75□□□□□ -1.33
USP48-202ENST00000374730 F13A1P00488 732 aa6.75□□□□□ -1.33
USP48-202ENST00000374730 PLCG1P19174 1290 aa6.75□□□□□ -1.33
USP48-202ENST00000374730 GBP2P32456 591 aaPredicted RBP6.75□□□□□ -1.33
USP48-202ENST00000374730 ZNF326Q5BKZ1 582 aaKnown RBP6.75□□□□□ -1.33
USP48-202ENST00000374730 LCE3BQ5TA77 95 aa6.75□□□□□ -1.33
USP48-202ENST00000374730 DNAJB8Q8NHS0 232 aa6.75□□□□□ -1.33
USP48-202ENST00000374730 PIWIL2Q8TC59 973 aaKnown RBP6.75□□□□□ -1.33
USP48-202ENST00000374730 CYB5D2Q8WUJ1 264 aa6.75□□□□□ -1.33
USP48-202ENST00000374730 HSPA12BQ96MM6 686 aa6.75□□□□□ -1.33
USP48-202ENST00000374730 BCL2L13Q9BXK5 485 aa6.75□□□□□ -1.33
USP48-202ENST00000374730 BCL11AQ9H165 835 aa6.75□□□□□ -1.33
USP48-202ENST00000374730 TROQ12816 1431 aaPredicted RBP6.75□□□□□ -1.33
USP48-202ENST00000374730 YBX3P16989 372 aaKnown RBP eCLIP6.74□□□□□ -1.33
USP48-202ENST00000374730 YARSP54577 528 aaKnown RBP6.74□□□□□ -1.33
USP48-202ENST00000374730 CDKAL1Q5VV42 579 aa6.74□□□□□ -1.33
USP48-202ENST00000374730 OGFOD2Q6N063 350 aa6.74□□□□□ -1.33
USP48-202ENST00000374730 ERMP1Q7Z2K6 904 aa6.74□□□□□ -1.33
USP48-202ENST00000374730 CDH24Q86UP0 819 aa6.74□□□□□ -1.33
USP48-202ENST00000374730 POU5F2Q8N7G0 328 aa6.74□□□□□ -1.33
USP48-202ENST00000374730 ATP13A1Q9HD20 1204 aa6.74□□□□□ -1.33
USP48-202ENST00000374730 CORINQ9Y5Q5 1042 aa6.74□□□□□ -1.33
USP48-202ENST00000374730 KDM6BO15054 1643 aa6.74□□□□□ -1.33
USP48-202ENST00000374730 KDM5BQ9UGL1 1544 aa6.74□□□□□ -1.33
USP48-202ENST00000374730 DAPK1P53355 1430 aa6.74□□□□□ -1.33
USP48-202ENST00000374730 CARMIL2Q6F5E8 1435 aa6.74□□□□□ -1.33
USP48-202ENST00000374730 F6X3S4 739 aa6.73□□□□□ -1.33
USP48-202ENST00000374730 H3BS24 57 aa6.73□□□□□ -1.33
USP48-202ENST00000374730 CBX7O95931 251 aa6.73□□□□□ -1.33
USP48-202ENST00000374730 MPP2Q14168 576 aa6.73□□□□□ -1.33
USP48-202ENST00000374730 MRPL58Q14197 206 aaKnown RBP6.73□□□□□ -1.33
USP48-202ENST00000374730 SNAP47Q5SQN1 464 aa6.73□□□□□ -1.33
USP48-202ENST00000374730 KRTAP1-3Q8IUG1 177 aa6.73□□□□□ -1.33
USP48-202ENST00000374730 SLFN12Q8IYM2 578 aa6.73□□□□□ -1.33
USP48-202ENST00000374730 FAM13CQ8NE31 585 aa6.73□□□□□ -1.33
USP48-202ENST00000374730 GIPC2Q8TF65 315 aa6.73□□□□□ -1.33
USP48-202ENST00000374730 FAM168AQ92567 244 aa6.73□□□□□ -1.33
USP48-202ENST00000374730 PRDM7Q9NQW5 492 aa6.73□□□□□ -1.33
USP48-202ENST00000374730 KCNQ5Q9NR82 932 aa6.73□□□□□ -1.33
USP48-202ENST00000374730 CEP131Q9UPN4 1083 aa6.73□□□□□ -1.33
USP48-202ENST00000374730 CDC42BPAQ5VT25 1732 aa6.73□□□□□ -1.33
USP48-202ENST00000374730 DENND4BO75064 1496 aaPredicted RBP6.73□□□□□ -1.33
USP48-202ENST00000374730 KIF14Q15058 1648 aa6.72□□□□□ -1.33
USP48-202ENST00000374730 GARTP22102 1010 aa6.72□□□□□ -1.33
USP48-202ENST00000374730 TNK2Q07912 1038 aa6.72□□□□□ -1.33
USP48-202ENST00000374730 PPP1R13LQ8WUF5 828 aa6.72□□□□□ -1.33
USP48-202ENST00000374730 SIN3AQ96ST3 1273 aa6.72□□□□□ -1.33
USP48-202ENST00000374730 CARS2Q9HA77 564 aaKnown RBP6.72□□□□□ -1.33
USP48-202ENST00000374730 KBTBD4Q9NVX7 518 aa6.72□□□□□ -1.33
USP48-202ENST00000374730 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.72□□□□□ -1.33
USP48-202ENST00000374730 CHD1O14646 1710 aa6.72□□□□□ -1.33
USP48-202ENST00000374730 ADGRL2O95490 1459 aa6.72□□□□□ -1.33
USP48-202ENST00000374730 TONSLQ96HA7 1378 aa6.71□□□□□ -1.33
USP48-202ENST00000374730 ABCC5O15440 1437 aa6.71□□□□□ -1.34
USP48-202ENST00000374730 FAM160A1Q05DH4 1040 aa6.71□□□□□ -1.34
USP48-202ENST00000374730 FAM196AQ6ZSG2 479 aa6.71□□□□□ -1.34
USP48-202ENST00000374730 TMPRSS7Q7RTY8 843 aa6.71□□□□□ -1.34
USP48-202ENST00000374730 REC114Q7Z4M0 266 aa6.71□□□□□ -1.34
USP48-202ENST00000374730 GOLM1Q8NBJ4 401 aa6.71□□□□□ -1.34
USP48-202ENST00000374730 TMEM40Q8WWA1 233 aa6.71□□□□□ -1.34
USP48-202ENST00000374730 CCDC120Q96HB5 630 aa6.71□□□□□ -1.34
USP48-202ENST00000374730 LRRC3Q9BY71 257 aa6.71□□□□□ -1.34
USP48-202ENST00000374730 REV1Q9UBZ9 1251 aa6.71□□□□□ -1.34
USP48-202ENST00000374730 CDK11AQ9UQ88 783 aaPredicted RBP6.71□□□□□ -1.34
USP48-202ENST00000374730 CTNND2Q9UQB3 1225 aa6.71□□□□□ -1.34
USP48-202ENST00000374730 POLR3KQ9Y2Y1 108 aaPredicted RBP6.71□□□□□ -1.34
USP48-202ENST00000374730 SHROOM2Q13796 1616 aa6.71□□□□□ -1.34
USP48-202ENST00000374730 CAMSAP2Q08AD1 1489 aa6.71□□□□□ -1.34
USP48-202ENST00000374730 PLB1Q6P1J6 1458 aa6.71□□□□□ -1.34
USP48-202ENST00000374730 ROBO2Q9HCK4 1378 aa6.7□□□□□ -1.34
USP48-202ENST00000374730 HTR3BO95264 441 aa6.7□□□□□ -1.34
USP48-202ENST00000374730 Q96M66 194 aa6.7□□□□□ -1.34
USP48-202ENST00000374730 SHANK2Q9UPX8 1470 aa6.7□□□□□ -1.34
USP48-202ENST00000374730 GPATCH8Q9UKJ3 1502 aaKnown RBP6.7□□□□□ -1.34
USP48-202ENST00000374730 PRG4Q92954 1404 aaPredicted RBP6.69□□□□□ -1.34
USP48-202ENST00000374730 ABCC10Q5T3U5 1492 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms