RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 FAF1Q9UNN5 650 aaPredicted RBP17.05■□□□□ 0.32
SRPK1-204ENST00000373825 ABCA5Q8WWZ7 1642 aa17.05■□□□□ 0.32
SRPK1-204ENST00000373825 RASSF10A6NK89 507 aa17.05■□□□□ 0.32
SRPK1-204ENST00000373825 SUN1O94901 812 aa17.05■□□□□ 0.32
SRPK1-204ENST00000373825 NDUFA10O95299 355 aa17.05■□□□□ 0.32
SRPK1-204ENST00000373825 TFRCP02786 760 aaKnown RBP17.05■□□□□ 0.32
SRPK1-204ENST00000373825 VPS41P49754 854 aa17.05■□□□□ 0.32
SRPK1-204ENST00000373825 EHHADHQ08426 723 aa17.05■□□□□ 0.32
SRPK1-204ENST00000373825 PPFIA2O75334 1257 aa17.05■□□□□ 0.32
SRPK1-204ENST00000373825 LSP1P33241 339 aa17.05■□□□□ 0.32
SRPK1-204ENST00000373825 SLCO1A2P46721 670 aa17.05■□□□□ 0.32
SRPK1-204ENST00000373825 RPS6KA1Q15418 735 aa17.05■□□□□ 0.32
SRPK1-204ENST00000373825 MPRIPQ6WCQ1 1025 aa17.05■□□□□ 0.32
SRPK1-204ENST00000373825 TEX33O43247 280 aa17.04■□□□□ 0.32
SRPK1-204ENST00000373825 CALCOCO2Q13137 446 aa17.04■□□□□ 0.32
SRPK1-204ENST00000373825 SLMAPQ14BN4 828 aa17.04■□□□□ 0.32
SRPK1-204ENST00000373825 ZC3H18Q86VM9 953 aaKnown RBP17.04■□□□□ 0.32
SRPK1-204ENST00000373825 MAP4K1Q92918 833 aa17.04■□□□□ 0.32
SRPK1-204ENST00000373825 MMS19Q96T76 1030 aa17.04■□□□□ 0.32
SRPK1-204ENST00000373825 STAP2Q9UGK3 403 aa17.04■□□□□ 0.32
SRPK1-204ENST00000373825 PLAAQ9Y263 795 aa17.04■□□□□ 0.32
SRPK1-204ENST00000373825 ZNF711Q9Y462 761 aa17.04■□□□□ 0.32
SRPK1-204ENST00000373825 TAOK1Q7L7X3 1001 aa17.04■□□□□ 0.32
SRPK1-204ENST00000373825 GSDMBQ8TAX9 411 aa17.04■□□□□ 0.32
SRPK1-204ENST00000373825 ZKSCAN3Q9BRR0 538 aa17.04■□□□□ 0.32
SRPK1-204ENST00000373825 ETAA1Q9NY74 926 aa17.04■□□□□ 0.32
SRPK1-204ENST00000373825 ATP8A1Q9Y2Q0 1164 aa17.04■□□□□ 0.32
SRPK1-204ENST00000373825 ADD1P35611 737 aaKnown RBP17.04■□□□□ 0.32
SRPK1-204ENST00000373825 HDLBPQ00341 1268 aaKnown RBP17.04■□□□□ 0.32
SRPK1-204ENST00000373825 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.04■□□□□ 0.32
SRPK1-204ENST00000373825 EMBQ6PCB8 327 aa17.04■□□□□ 0.32
SRPK1-204ENST00000373825 USP44Q9H0E7 712 aa17.04■□□□□ 0.32
SRPK1-204ENST00000373825 PLEKHO1Q53GL0 409 aaPredicted RBP17.04■□□□□ 0.32
SRPK1-204ENST00000373825 CCHCR1Q8TD31 782 aa17.04■□□□□ 0.32
SRPK1-204ENST00000373825 ZKSCAN4Q969J2 545 aaPredicted RBP17.04■□□□□ 0.32
SRPK1-204ENST00000373825 AATFQ9NY61 560 aaKnown RBP eCLIP17.04■□□□□ 0.32
SRPK1-204ENST00000373825 ABTB2Q8N961 1025 aa17.03■□□□□ 0.32
SRPK1-204ENST00000373825 PAG1Q9NWQ8 432 aa17.03■□□□□ 0.32
SRPK1-204ENST00000373825 RHBDL2Q9NX52 303 aa17.03■□□□□ 0.32
SRPK1-204ENST00000373825 INTUQ9ULD6 942 aa17.03■□□□□ 0.32
SRPK1-204ENST00000373825 SLC8A3P57103 927 aa17.03■□□□□ 0.32
SRPK1-204ENST00000373825 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.03■□□□□ 0.326e-8■■■□□ 15.1
SRPK1-204ENST00000373825 DYDC2Q96IM9 177 aa17.03■□□□□ 0.32
SRPK1-204ENST00000373825 MAGI1Q96QZ7 1491 aaPredicted RBP17.03■□□□□ 0.32
SRPK1-204ENST00000373825 PLCD1P51178 756 aa17.03■□□□□ 0.32
SRPK1-204ENST00000373825 SLC9C1Q4G0N8 1177 aa17.03■□□□□ 0.32
SRPK1-204ENST00000373825 SYCP3Q8IZU3 236 aa17.03■□□□□ 0.32
SRPK1-204ENST00000373825 FMR1NBQ8N0W7 255 aaPredicted RBP17.03■□□□□ 0.32
SRPK1-204ENST00000373825 RILPL1Q5EBL4 403 aa17.03■□□□□ 0.32
SRPK1-204ENST00000373825 ARHGEF25Q86VW2 580 aa17.03■□□□□ 0.32
SRPK1-204ENST00000373825 NUDT16Q96DE0 195 aaKnown RBP17.03■□□□□ 0.32
SRPK1-204ENST00000373825 PANX2Q96RD6 677 aa17.03■□□□□ 0.32
SRPK1-204ENST00000373825 EPN3Q9H201 632 aa17.03■□□□□ 0.32
SRPK1-204ENST00000373825 CHCHD3Q9NX63 227 aaKnown RBP17.03■□□□□ 0.32
SRPK1-204ENST00000373825 A2MP01023 1474 aa17.02■□□□□ 0.32
SRPK1-204ENST00000373825 GRM8O00222 908 aa17.02■□□□□ 0.32
SRPK1-204ENST00000373825 GPTP24298 496 aa17.02■□□□□ 0.32
SRPK1-204ENST00000373825 PPARAQ07869 468 aa17.02■□□□□ 0.32
SRPK1-204ENST00000373825 WTAPQ15007 396 aa17.02■□□□□ 0.32
SRPK1-204ENST00000373825 ZNF449Q6P9G9 518 aa17.02■□□□□ 0.32
SRPK1-204ENST00000373825 URB2Q14146 1524 aaKnown RBP17.02■□□□□ 0.32
SRPK1-204ENST00000373825 HMGB1P1B2RPK0 211 aaPredicted RBP17.02■□□□□ 0.32
SRPK1-204ENST00000373825 PSEN1P49768 467 aa17.02■□□□□ 0.32
SRPK1-204ENST00000373825 HOMER3Q9NSC5 361 aa17.02■□□□□ 0.32
SRPK1-204ENST00000373825 MBD5Q9P267 1494 aa17.02■□□□□ 0.31
SRPK1-204ENST00000373825 ZNF185O15231 689 aa17.02■□□□□ 0.31
SRPK1-204ENST00000373825 MFAP3LO75121 409 aa17.02■□□□□ 0.31
SRPK1-204ENST00000373825 MOCS3O95396 460 aa17.02■□□□□ 0.31
SRPK1-204ENST00000373825 GNAT1P11488 350 aa17.02■□□□□ 0.31
SRPK1-204ENST00000373825 RASSF2P50749 326 aa17.02■□□□□ 0.31
SRPK1-204ENST00000373825 COPB1P53618 953 aaKnown RBP17.02■□□□□ 0.31
SRPK1-204ENST00000373825 TFCP2Q12800 502 aa17.02■□□□□ 0.31
SRPK1-204ENST00000373825 MORC3Q14149 939 aa17.02■□□□□ 0.31
SRPK1-204ENST00000373825 MAP7D1Q3KQU3 841 aa17.02■□□□□ 0.31
SRPK1-204ENST00000373825 HNRNPLLQ8WVV9 542 aaKnown RBP17.02■□□□□ 0.31
SRPK1-204ENST00000373825 FGD4Q96M96 766 aa17.02■□□□□ 0.31
SRPK1-204ENST00000373825 PLEKHF1Q96S99 279 aa17.02■□□□□ 0.31
SRPK1-204ENST00000373825 NOD2Q9HC29 1040 aa17.02■□□□□ 0.31
SRPK1-204ENST00000373825 LRP2BPQ9P2M1 347 aa17.02■□□□□ 0.31
SRPK1-204ENST00000373825 CCDC61Q9Y6R9 512 aa17.02■□□□□ 0.31
SRPK1-204ENST00000373825 ACTN4O43707 911 aaKnown RBP17.01■□□□□ 0.31
SRPK1-204ENST00000373825 ATP1A1P05023 1023 aaKnown RBP17.01■□□□□ 0.31
SRPK1-204ENST00000373825 PHLDB3Q6NSJ2 640 aa17.01■□□□□ 0.31
SRPK1-204ENST00000373825 LRWD1Q9UFC0 647 aa17.01■□□□□ 0.31
SRPK1-204ENST00000373825 CIB2O75838 187 aa17.01■□□□□ 0.31
SRPK1-204ENST00000373825 CEP70Q8NHQ1 597 aa17.01■□□□□ 0.31
SRPK1-204ENST00000373825 RAPGEF4Q8WZA2 1011 aa17.01■□□□□ 0.31
SRPK1-204ENST00000373825 HOMER2Q9NSB8 354 aa17.01■□□□□ 0.31
SRPK1-204ENST00000373825 MAN1B1Q9UKM7 699 aa17.01■□□□□ 0.31
SRPK1-204ENST00000373825 KRIT1O00522 736 aa17.01■□□□□ 0.31
SRPK1-204ENST00000373825 SKIP12755 728 aa17.01■□□□□ 0.31
SRPK1-204ENST00000373825 CDC25AP30304 524 aa17.01■□□□□ 0.31
SRPK1-204ENST00000373825 CTCFP49711 727 aaPredicted RBP17.01■□□□□ 0.31
SRPK1-204ENST00000373825 METTL24Q5JXM2 366 aa17.01■□□□□ 0.31
SRPK1-204ENST00000373825 ZNF589Q86UQ0 364 aaPredicted RBP17.01■□□□□ 0.31
SRPK1-204ENST00000373825 SCYL3Q8IZE3 742 aa17.01■□□□□ 0.31
SRPK1-204ENST00000373825 DBNDD2Q9BQY9 259 aa17.01■□□□□ 0.31
SRPK1-204ENST00000373825 PHF20L1A8MW92 1017 aa17.01■□□□□ 0.31
SRPK1-204ENST00000373825 E7EWF7 191 aa17.01■□□□□ 0.31
SRPK1-204ENST00000373825 IGHMBP2P38935 993 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms